Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_F09
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132858-2|CAB60476.2|  821|Caenorhabditis elegans Hypothetical ...   285   2e-77
Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    33   0.30 
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    31   0.69 
AL034393-17|CAA22315.1|  503|Caenorhabditis elegans Hypothetical...    31   1.2  
Z11115-2|CAA77450.1|  599|Caenorhabditis elegans Hypothetical pr...    29   4.9  

>AL132858-2|CAB60476.2|  821|Caenorhabditis elegans Hypothetical
           protein Y113G7A.3 protein.
          Length = 821

 Score =  285 bits (700), Expect = 2e-77
 Identities = 121/205 (59%), Positives = 165/205 (80%), Gaps = 4/205 (1%)
 Frame = +2

Query: 173 MATYEEFIQQNEDRDGIRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDL----PPIQY 340
           MAT+EE++   +  DG++FTWN+WP SR+++ +LVVPL C + PLKERP      PP++Y
Sbjct: 1   MATWEEYLGAQQANDGVQFTWNMWPHSRVDSQKLVVPLTCFFTPLKERPSTEVAQPPLEY 60

Query: 341 EPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPNFST 520
           +PVLC + +C+AILNP+C VDYRAK+W+C FC  RNPFP  YAAI+E ++P EL P F+T
Sbjct: 61  DPVLCQKASCKAILNPLCAVDYRAKIWMCPFCNNRNPFPAHYAAIAEDNRPPELYPQFTT 120

Query: 521 IEYTITRAQAMPPIYLLVVDTCLDEEELGALKDSLQTSLSLMPQNALVGLITFGKMVQIH 700
           IEYT+ +A  MPPI++ VVDTC+  EEL +LK+ LQT+LSL+P +ALVGLIT+G+MVQ+H
Sbjct: 121 IEYTLRKATTMPPIFVFVVDTCMTAEELKSLKECLQTALSLLPADALVGLITYGRMVQLH 180

Query: 701 ELGTEGISKCYVFKGTKDLSXKQIQ 775
           EL T+GIS+ YVFKGTK+++ KQI+
Sbjct: 181 ELNTQGISRSYVFKGTKEVTAKQIK 205


>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +2

Query: 278 VPLACLYQPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQV-DYRAKLWVCNFCFQRNPF 454
           +P A    P ++  +L  IQ   ++  R  CR  +NP   + D+R   W CN C + N  
Sbjct: 307 LPFAITLHPFRDVKNLNIIQTSNIVRCRY-CRTYINPYVYLPDHRH--WKCNLCNRNNDL 363

Query: 455 PPQY 466
           P  +
Sbjct: 364 PDDF 367


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
           protein F12F6.6 protein.
          Length = 1126

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 21/81 (25%), Positives = 35/81 (43%)
 Frame = +2

Query: 230 TWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQVDYR 409
           T ++  +S+I    ++ P A L +  KE P +      P+ C R  C+A + P  +    
Sbjct: 416 TNDILKASQIPLAVVISPFASLTEYEKEPPVVDLGPQGPIRCQR--CKAYICPFMEFQDG 473

Query: 410 AKLWVCNFCFQRNPFPPQYAA 472
            + + C FC  R      Y A
Sbjct: 474 GRSFRCPFCHARTSVEDAYFA 494


>AL034393-17|CAA22315.1|  503|Caenorhabditis elegans Hypothetical
           protein Y18D10A.23 protein.
          Length = 503

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = +3

Query: 174 WPHTRSSSSRMKTAMAYGSLGTYGHQVEXXXXXXXXXXXACTNRLRSAPTYHRYSTSLYS 353
           WP  R+   R    MAY +LG +  QV            AC   L SA  +     + + 
Sbjct: 101 WPKYRTHCRRPYPEMAYRALGNWARQVVAVCLVVSQFLIACVLLLISAENFTNLLNTFFH 160

Query: 354 VH 359
           +H
Sbjct: 161 LH 162


>Z11115-2|CAA77450.1|  599|Caenorhabditis elegans Hypothetical
           protein ZK637.3 protein.
          Length = 599

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/70 (24%), Positives = 32/70 (45%)
 Frame = +2

Query: 536 TRAQAMPPIYLLVVDTCLDEEELGALKDSLQTSLSLMPQNALVGLITFGKMVQIHELGTE 715
           TRA   P I ++    C   E+ G  +  ++   ++ P+N  +G+I  G    + E G+ 
Sbjct: 339 TRANTRPVIKVMDNAECTKCEKNGTRRFEIRAQENIQPKNMSLGVIKMGTFFDLLEDGSL 398

Query: 716 GISKCYVFKG 745
            +   Y + G
Sbjct: 399 DLLVEYEYGG 408


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,348,567
Number of Sequences: 27780
Number of extensions: 434322
Number of successful extensions: 957
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)