BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_F07
(805 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione S-tran... 25 3.6
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 24 6.3
>AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione
S-transferase D12 protein.
Length = 211
Score = 24.6 bits (51), Expect = 3.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 260 MGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
M +NT ++ A+ HL NNP ++ L +K V V
Sbjct: 102 MFQNTTLQ-AVLSHLRNNPITDEHLAKVKRGVEIV 135
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 23.8 bits (49), Expect = 6.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 202 GLATDAADPYLATWLQYRAHGKKHNDAQSHQR 297
G ATD + LA Q + H +H Q HQ+
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQ 324
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 890,125
Number of Sequences: 2352
Number of extensions: 18242
Number of successful extensions: 58
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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