Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_F06
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 385 e-107
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 184 9e-47
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 163 1e-40
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 126 1e-29
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 126 1e-29
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 120 9e-28
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 115 5e-26
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 107 1e-23
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 107 1e-23
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 101 6e-22
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 79 3e-15
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 79 5e-15
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 67 1e-11
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 67 1e-11
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 63 3e-10
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 54 9e-08
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 52 4e-07
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 50 3e-06
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 50 3e-06
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 50 3e-06
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 48 6e-06
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 46 2e-05
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 46 2e-05
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 43 3e-04
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 43 3e-04
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 38 0.011
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 38 0.011
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 38 0.011
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 35 0.078
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 35 0.078
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.73
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.73
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.73
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.73
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 31 0.73
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.73
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 31 0.73
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.73
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 31 1.3
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 29 3.9
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 29 3.9
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 5.1
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 29 5.1
AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical ... 29 5.1
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 29 5.1
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 29 5.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 28 6.8
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 28 9.0
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 28 9.0
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 9.0
AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical ... 28 9.0
AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical ... 28 9.0
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 385 bits (948), Expect = e-107
Identities = 179/211 (84%), Positives = 197/211 (93%)
Frame = +1
Query: 172 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 351
YE PIP+R+GKKK+ +KGPDAA KLP VTPH RCRLKLLK ERIKDYLLME+EFI+NQER
Sbjct: 28 YEAPIPSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQER 87
Query: 352 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 531
LKPQEE+ EEER+KVD+LRGTPM+VG+LEEIIDD HAIVST+VGSEHYV+I+SFVDK+QL
Sbjct: 88 LKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQL 147
Query: 532 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELP 711
EPGCSVLLNHK HAV+GVL DDTDPMVSVMKLEKAPQETYAD+GGLD QIQEIKE+VELP
Sbjct: 148 EPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELP 207
Query: 712 LTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
LTHPEYYE MGI PPKGVILYG PGTGKTLL
Sbjct: 208 LTHPEYYEEMGIRPPKGVILYGCPGTGKTLL 238
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 184 bits (447), Expect = 9e-47
Identities = 109/220 (49%), Positives = 134/220 (60%), Gaps = 14/220 (6%)
Frame = +1
Query: 187 PTRVGKK---KRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERL- 354
PT K K +G + A KLP V P +C ++LLK+ RI DYL +E+EFI Q
Sbjct: 15 PTHAAMKIAMKSGRRGIENANKLPTVAPKRQCLVRLLKMNRIHDYLQLEKEFITRQTSRH 74
Query: 355 -KPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDN-HAIVSTSVGS--EHYVSILSFVDK 522
+P + E+ V LRGTP ++ + E+ DD HA+V GS E YV ILS VDK
Sbjct: 75 GRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVE-GSRREWYVPILSIVDK 133
Query: 523 DQLEPGCSVLLN----HKV--HAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQ 684
D L V++ K A+VGVL D D K+EK P+ET+ DIGG ++QIQ
Sbjct: 134 DLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQ 193
Query: 685 EIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
E+KESVELPLTHPEYYE MGI PKGVILYG PGTGKTLL
Sbjct: 194 ELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLL 233
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 163 bits (396), Expect = 1e-40
Identities = 75/176 (42%), Positives = 120/176 (68%)
Frame = +1
Query: 277 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDN 456
+KL LER +L + E++I+ + R E+++ + +V ++ P+ +G E +D N
Sbjct: 38 IKLTTLERQLAHLQVMEDYIKLETR--NLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQN 95
Query: 457 HAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKA 636
HAIV ++ GS +YV +LS +D++ L+PGCSV L+ +A+V VL + D + +++ ++
Sbjct: 96 HAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEK 155
Query: 637 PQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
P +Y DIGGLD Q QE++E+VELPLTH E Y+ +GI PP+GV++YGPPG GKT+L
Sbjct: 156 PDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTML 211
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 126 bits (305), Expect = 1e-29
Identities = 72/206 (34%), Positives = 113/206 (54%)
Frame = +1
Query: 187 PTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQE 366
P V RK DA + P+ + +++ + + + + + + Q+ L +
Sbjct: 3 PAPVFPNSRKPATLDANSDEQTLRPYFKTKVEQAE-QTVAEKSINVRRLMAQQKELNGKV 61
Query: 367 EKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCS 546
++EE S + + +G+ VG + + +D +V ++ V + + VD L G
Sbjct: 62 RLLKEEISHLHE-QGS--HVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTR 118
Query: 547 VLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPE 726
V L +A+ VL DP+VS+M +EK P TY +GGLDTQI+EIKE +ELP+ HPE
Sbjct: 119 VALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPE 178
Query: 727 YYEXMGIXPPKGVILYGPPGTGKTLL 804
++ +GI PKGV+LYGPPGTGKTLL
Sbjct: 179 LFDALGIAQPKGVLLYGPPGTGKTLL 204
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 126 bits (305), Expect = 1e-29
Identities = 72/206 (34%), Positives = 113/206 (54%)
Frame = +1
Query: 187 PTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQE 366
P V RK DA + P+ + +++ + + + + + + Q+ L +
Sbjct: 24 PAPVFPNSRKPATLDANSDEQTLRPYFKTKVEQAE-QTVAEKSINVRRLMAQQKELNGKV 82
Query: 367 EKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCS 546
++EE S + + +G+ VG + + +D +V ++ V + + VD L G
Sbjct: 83 RLLKEEISHLHE-QGS--HVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTR 139
Query: 547 VLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPE 726
V L +A+ VL DP+VS+M +EK P TY +GGLDTQI+EIKE +ELP+ HPE
Sbjct: 140 VALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPE 199
Query: 727 YYEXMGIXPPKGVILYGPPGTGKTLL 804
++ +GI PKGV+LYGPPGTGKTLL
Sbjct: 200 LFDALGIAQPKGVLLYGPPGTGKTLL 225
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 120 bits (290), Expect = 9e-28
Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Frame = +1
Query: 337 RNQERLKPQEEKIEEE----RSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSI 504
+N RL+ Q ++ + + ++ L VG + + +D +V ++ V +
Sbjct: 50 QNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDV 109
Query: 505 LSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQ 684
+D + L G V L +A+ +L + DP+VS+M +EK P TY +GGLD QI+
Sbjct: 110 DKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 169
Query: 685 EIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
EIKE +ELP+ HPE ++ +GI PKGV+L+GPPGTGKTLL
Sbjct: 170 EIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLL 209
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 115 bits (276), Expect = 5e-26
Identities = 62/181 (34%), Positives = 102/181 (56%), Gaps = 18/181 (9%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--DNH---------- 459
+M E R +E+I+E ++ + P V N+ E++D DN
Sbjct: 47 IMRSEVQRINHSATTLKERIKENTERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLD 106
Query: 460 ------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVM 621
A++ TS + +++ ++ VD D+L+PG V +N + ++ L + D V M
Sbjct: 107 AQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAM 166
Query: 622 KLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTL 801
++++ P E Y+DIGG D QIQE+ E+V LP+TH + + +GI PPKGV++YGPPGTGKT+
Sbjct: 167 EVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTM 226
Query: 802 L 804
+
Sbjct: 227 M 227
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 107 bits (256), Expect = 1e-23
Identities = 57/172 (33%), Positives = 95/172 (55%)
Frame = +1
Query: 289 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIV 468
KL +D ++ + + + Q +K E + + L+ VG + + + + IV
Sbjct: 24 KLAECRDIEQKLKDLRKKESEMTKQFDKSEND---IKSLQSVGQIVGEVLKQLSEEKFIV 80
Query: 469 STSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQET 648
+ G + V ++K++L+ G V L+ ++ L + DP+V M E +
Sbjct: 81 KATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNIS 140
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
Y+D+GGL QI+E++E VELPL +PE ++ +GI PPKG +L+GPPGTGKTLL
Sbjct: 141 YSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLL 192
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 107 bits (256), Expect = 1e-23
Identities = 57/172 (33%), Positives = 95/172 (55%)
Frame = +1
Query: 289 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIV 468
KL +D ++ + + + Q +K E + + L+ VG + + + + IV
Sbjct: 32 KLAECRDIEQKLKDLRKKESEMTKQFDKSEND---IKSLQSVGQIVGEVLKQLSEEKFIV 88
Query: 469 STSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQET 648
+ G + V ++K++L+ G V L+ ++ L + DP+V M E +
Sbjct: 89 KATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNIS 148
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
Y+D+GGL QI+E++E VELPL +PE ++ +GI PPKG +L+GPPGTGKTLL
Sbjct: 149 YSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLL 200
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 101 bits (242), Expect = 6e-22
Identities = 52/133 (39%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Frame = +1
Query: 415 PMSVGNLEEII-DDNHA---IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVG 582
P+ V +II D H +++ ++ V + V +E G V ++ + +
Sbjct: 94 PLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHL 153
Query: 583 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKG 762
L DP V++M++E+ P TY+D+GG QI++++E VE PL HPE Y +GI PPKG
Sbjct: 154 PLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKG 213
Query: 763 VILYGPPGTGKTL 801
V+LYGPPGTGKTL
Sbjct: 214 VLLYGPPGTGKTL 226
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/74 (44%), Positives = 52/74 (70%)
Frame = +1
Query: 583 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKG 762
V+ + DP+ + E + Y D+GG+ Q+ +IKE VELPL HP+ ++ +G+ PP+G
Sbjct: 186 VIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRG 245
Query: 763 VILYGPPGTGKTLL 804
++L+GPPGTGKTL+
Sbjct: 246 ILLFGPPGTGKTLI 259
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +1
Query: 631 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ P T++DIGGL +E++E V+ P+ HPE Y G+ P +GV+ YGPPG GKTLL
Sbjct: 475 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/74 (44%), Positives = 52/74 (70%)
Frame = +1
Query: 583 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKG 762
V+ + DP+ + E + Y D+GG+ Q+ +IKE VELPL HP+ ++ +G+ PP+G
Sbjct: 186 VIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRG 245
Query: 763 VILYGPPGTGKTLL 804
++L+GPPGTGKTL+
Sbjct: 246 ILLFGPPGTGKTLI 259
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +1
Query: 631 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ P T++DIGGL +E++E V+ P+ HPE Y G+ P +GV+ YGPPG GKTLL
Sbjct: 475 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 78.6 bits (185), Expect = 5e-15
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +1
Query: 601 DPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGP 780
DP+ + E Y D+GG+ Q+ +IKE VELPL HP+ ++ +GI PP+G++L+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 781 PGTGKTLL 804
PGTGKTL+
Sbjct: 253 PGTGKTLI 260
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +1
Query: 631 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ P T++DIGGL +E++E V+ P+ HPE Y G+ P +GV+ YGPPG GKTLL
Sbjct: 476 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ +GGL IQ +KE V P+ +PE +E I PPKGV+ YGPPGTGKTL+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ +GGL IQ +KE V P+ +PE +E I PPKGV+ YGPPGTGKTL+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 439
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ +GGL IQ +KE V P+ +PE +E I PPKGV+ YGPPGTGKTL+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ +GGL IQ +KE V P+ +PE +E I PPKGV+ YGPPGTGKTL+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ +GGL IQ +KE V P+ +PE +E I PPKGV+ YGPPGTGKTL+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 439
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ +GGL IQ +KE V P+ +PE +E I PPKGV+ YGPPGTGKTL+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ +GGL IQ +KE V P+ +PE +E I PPKGV+ YGPPGTGKTL+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +1
Query: 631 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ P ++ DIGG + EI+++V P HPE +E GI PP G++LYGPPG KTL+
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLI 509
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 652 ADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
++IGG T Q +++ V P+ E P V+++G PG+GKTLL
Sbjct: 246 SNIGGCFTAKQVLEDYVISPVRQKE--------SPCSVLIWGLPGSGKTLL 288
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+AD+ GL+ + ++E V LP P+ + + PPKGV+L+GPPGTGKT++
Sbjct: 315 WADVAGLEGAKKALREIVVLPFKRPDVFTGIRA-PPKGVLLFGPPGTGKTMI 365
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+AD+ G + EI E V L +P+ Y+ +G PKG IL GPPGTGKTLL
Sbjct: 292 FADVAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLL 342
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +1
Query: 655 DIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+IGG + + E+K+ + LPL + PP+G++LYGPPG GKTLL
Sbjct: 81 EIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLL 130
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +1
Query: 655 DIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+IGG + + E+K+ + LPL + PP+G++LYGPPG GKTLL
Sbjct: 84 EIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLL 133
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 658 IGGLDTQIQEI-KESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
IGGLDT+ I + + + PE+ E +G+ +G++L+GPPGTGKTL+
Sbjct: 297 IGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLM 346
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 658 IGGLDTQIQEI-KESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
IGGLDT+ I + + + PE+ E +G+ +G++L+GPPGTGKTL+
Sbjct: 297 IGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLM 346
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 658 IGGLDTQIQEI-KESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
IGGLDT+ I + + + PE+ E +G+ +G++L+GPPGTGKTL+
Sbjct: 231 IGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLM 280
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +1
Query: 646 TYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
T D+GG+ Q + +++ + P +P+ +E +G+ KG++L+GP G GKTLL
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLL 778
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = +1
Query: 601 DPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGP 780
D + + +EK P + DI GL+ + +KE+V LP+ P+ + P +G++L+GP
Sbjct: 102 DKLSGAIVMEK-PNVKWTDIAGLEGAKEALKEAVILPIKFPQLFTG-NRKPWQGILLFGP 159
Query: 781 PGTGKTLL 804
PGTGK+ +
Sbjct: 160 PGTGKSYI 167
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +1
Query: 646 TYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
T D+GG+ Q + +++ + P +P+ +E +G+ KG++L+GP G GKTLL
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLL 778
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = +1
Query: 655 DIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
D+GG+ Q + +++ + P +P+ +E +G+ KG++L+GP G GKTLL
Sbjct: 3 DVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLL 52
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 577 VGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPP 756
+G + D P S +K E IGG D Q E+ + + L P+ + +G+ PP
Sbjct: 189 LGAVSDTISPRESHVKFEH--------IGGADRQFLEVCR-LAMHLKRPKTFATLGVDPP 239
Query: 757 KGVILYGPPGTGKTL 801
+G I++GPPG GKT+
Sbjct: 240 RGFIVHGPPGCGKTM 254
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 637 PQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIX-PPKGVILYGPPGTGKTLL 804
P ++ DIG L ++++ S+ P+ + + +GI P+G++L GPPG GKTLL
Sbjct: 528 PDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLL 584
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 577 VGVLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPP 756
+G + D P S +K E IGG D Q E+ + + L P+ + +G+ PP
Sbjct: 189 LGAVSDTISPRESHVKFEH--------IGGADRQFLEVCR-LAMHLKRPKTFATLGVDPP 239
Query: 757 KGVILYGPPGTGKTL 801
+G I++GPPG GKT+
Sbjct: 240 RGFIVHGPPGCGKTM 254
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 637 PQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIX-PPKGVILYGPPGTGKTLL 804
P ++ DIG L ++++ S+ P+ + + +GI P+G++L GPPG GKTLL
Sbjct: 528 PDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLL 584
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1
Query: 667 LDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+D E++E V+ L PE Y +G PKGV+L GPPGTGKTLL
Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLL 250
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +1
Query: 655 DIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
DI G+ Q + E+V LPL PE+++ + P K ++L GPPGTGKTL+
Sbjct: 194 DIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLI 242
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +1
Query: 655 DIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
DI G+ Q + E+V LPL PE+++ + P K ++L GPPGTGKTL+
Sbjct: 194 DIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLI 242
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +1
Query: 655 DIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
DI G+ Q + E+V LPL PE+++ + P K ++L GPPGTGKTL+
Sbjct: 194 DIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLI 242
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 46.0 bits (104), Expect = 3e-05
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 8/199 (4%)
Frame = +1
Query: 232 AALKLPQVTPHTRC---RLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDD 402
AA+++ ++T H +L+ +L + LL E + + + +I ++R +
Sbjct: 30 AAIEMDELTKHAGSIQEKLRTAELYKEARSLLKEANEFNIMDIPETRRSEIRDKRQNMMK 89
Query: 403 LRGTPMS--VGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAV 576
L + + E+ + S +VG S + + L H+
Sbjct: 90 LEKSAQDRLIAICNEVDPNVKQSRSATVGPSRPASAARVTPRPTRATAPASLPMHQNPVN 149
Query: 577 VGVLGDDTDPMVSVMKLEKAPQETYA---DIGGLDTQIQEIKESVELPLTHPEYYEXMGI 747
L + D ++ L++ T D+ G + ++E+V LP +P ++ +
Sbjct: 150 RAALLNGVDKVIGERLLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFKGLR- 208
Query: 748 XPPKGVILYGPPGTGKTLL 804
P KG++L+GPPG GKTLL
Sbjct: 209 QPVKGILLFGPPGNGKTLL 227
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ D+ G EI+E V+ L +P + +G P+G +L GPPG GKTLL
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLL 334
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 649 YADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
+ D+ G EI+E V+ L +P + +G P+G +L GPPG GKTLL
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLL 334
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1
Query: 631 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
K P + D+GGL+ Q + ES+ L + GI ILYG PG GKTL+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRTNLFGSRALKRSGI------ILYGSPGCGKTLI 509
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1
Query: 631 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
K P + D+GGL+ Q + ES+ L + GI ILYG PG GKTL+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRTNLFGSRALKRSGI------ILYGSPGCGKTLI 509
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1
Query: 631 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKTLL 804
K P + D+GGL+ Q + ES+ L + GI ILYG PG GKTL+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESIRTNLFGSRALKRSGI------ILYGSPGCGKTLI 509
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 667 LDTQI-QEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKT 798
LD +I +E+ E + ++ +Y G+ +G + YGPPGTGK+
Sbjct: 167 LDGRICEELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTGKS 211
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 667 LDTQI-QEIKESVELPLTHPEYYEXMGIXPPKGVILYGPPGTGKT 798
LD +I +E+ E + ++ +Y G+ +G + YGPPGTGK+
Sbjct: 213 LDGRICEELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTGKS 257
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDD 402
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDD 402
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDD 402
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDD 402
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.73
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 202 KKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE-RLKPQEEKIE 378
+++ K K +A + ++ P R R++ +K E ++ + E E ++ +E RLK +EEK++
Sbjct: 882 RREEKCKEKEAEEENEKLIPE-RKRMEAIKEE--EERVKAEREKVKKEEERLKAEEEKVK 938
Query: 379 EERSKV 396
E+ KV
Sbjct: 939 VEKEKV 944
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 193 RVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIR-NQERLKPQEE 369
RV ++ K K + LK + + E++K +E ++ +ERLK +EE
Sbjct: 915 RVKAEREKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKAEEERLKAEEE 974
Query: 370 KIEEERSKV 396
K++ E+ KV
Sbjct: 975 KVKIEKEKV 983
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDD 402
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDD 402
L+EEE R +ERLK EK+EE VD+
Sbjct: 3 LLEEELERAEERLKIATEKLEEATHNVDE 31
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDD 402
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +1
Query: 199 GKKKRKAKGPDAALKLPQVTPH-TRCRLKLLKLERIKDYL-LMEEEFIRN--QERLKPQE 366
GKK++ A Q T T K+L +I++Y E E + N ++ +
Sbjct: 747 GKKEKAAPSTVPGASRSQSTKSSTEIPTKILGANKIREYEPANENEQLMNLKKQEVTGLP 806
Query: 367 EKIEEERSKVDDLRGTPMSVGNLEEI 444
EKI++ RS++DD+R + + N+ E+
Sbjct: 807 EKIDQLRSRLDDIR---VGIANMHEV 829
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 757 KGVILYGPPGTGKTL 801
+ V+ YGPPGTGKTL
Sbjct: 343 RNVMFYGPPGTGKTL 357
>Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical
protein W02A2.6 protein.
Length = 781
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 280 KLLKLERIKDY-LLMEEEFIRNQERLKPQEEKIEEERSK 393
KL +L + K + LLM E F RNQE L+ +E+K RSK
Sbjct: 89 KLKELMKKKSFILLMAERFDRNQE-LQRKEDKFARLRSK 126
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 313 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 453
+L+EE+ R ++RLK K+E+ D+ + ++ N ++ DD
Sbjct: 65 VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 313 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 453
+L+EE+ R ++RLK K+E+ D+ + ++ N ++ DD
Sbjct: 65 VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 241 KLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQ-EEKIEEERSKVDDLR 408
KL Q+ R++ L+ ++ + M E+ + E +K Q E+K+ E R ++DDL+
Sbjct: 1447 KLTQLRNELTARIEQLESQKSNEQAQMSEK-LSQVESMKVQIEQKLYETREELDDLK 1502
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 289 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 453
KL+ K+ L E+ R Q+ K + ++ S +DD + LEE++D+
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 289 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 453
KL+ K+ L E+ R Q+ K + ++ S +DD + LEE++D+
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 420
L E+ R + R + +EEK+++E SK+ +L P+
Sbjct: 364 LFEKIEAREERRKRKEEEKLKDELSKIKELEEQPV 398
>AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical
protein C17E7.5 protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 226 PDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEF 333
PDA L+L Q++P R++ L + ++ + + +EEF
Sbjct: 240 PDAILRLKQISPQFLQRIRSLLVMKLIELKITDEEF 275
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 364 EEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ-LEPG 540
EE +E E +DD+ + GNLE D + S+ +E ++ +V++ + L G
Sbjct: 2739 EETVETEEMIMDDMMDLYYTPGNLEIARDTFDKLEIASIMNEILYTVDQYVEETEILFRG 2798
Query: 541 CSVLLNHKVHAVVGV 585
S + + AV+ +
Sbjct: 2799 ASTAADRQAFAVMSI 2813
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 316 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 420
L E+ R + R + +EEK+++E SK+ +L P+
Sbjct: 364 LFEKIEAREERRKRKEEEKLKDELSKIKELEEQPV 398
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 289 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDL 405
K E K+ + +EE + E K +EEK EEE K D++
Sbjct: 323 KEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEV 361
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 745 IXPPKGVILYGPPGTGKTLL 804
I P+G+ LYG G GKT+L
Sbjct: 87 IISPRGIYLYGSVGCGKTML 106
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.9 bits (59), Expect = 9.0
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Frame = +1
Query: 274 RLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 453
R K LKL+ KD + +E L+ + EK+ E+ + ++ LE+I +
Sbjct: 367 RQKELKLQLEKDMEDLRKEHEGQMAELEKRLEKVSEKEKE---------AIEQLEKIQKE 417
Query: 454 NHAIVSTSV--GSEHYVSILSFVD-KDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMK 624
N IV +V V + S ++ K++L+ +V L + H V G+ + +S K
Sbjct: 418 NKTIVKENVYLSESKQVLLESEINLKNELDE-MAVKLRNSQHQVAGL-----NEKISEEK 471
Query: 625 LEKAPQETYADIGGLDTQ----IQEIKESVEL 708
+ Q+ AD+ LD Q ++E ++S EL
Sbjct: 472 RRRKKQD--ADVTRLDEQNQKLLREAQDSAEL 501
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.9 bits (59), Expect = 9.0
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Frame = +1
Query: 274 RLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 453
R K LKL+ KD + +E L+ + EK+ E+ + ++ LE+I +
Sbjct: 367 RQKELKLQLEKDMEDLRKEHEGQMAELEKRLEKVSEKEKE---------AIEQLEKIQKE 417
Query: 454 NHAIVSTSV--GSEHYVSILSFVD-KDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMK 624
N IV +V V + S ++ K++L+ +V L + H V G+ + +S K
Sbjct: 418 NKTIVKENVYLSESKQVLLESEINLKNELDE-MAVKLRNSQHQVAGL-----NEKISEEK 471
Query: 625 LEKAPQETYADIGGLDTQ----IQEIKESVEL 708
+ Q+ AD+ LD Q ++E ++S EL
Sbjct: 472 RRRKKQD--ADVTRLDEQNQKLLREAQDSAEL 501
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Frame = +1
Query: 268 RCRLKLLKLERIKDYLLMEEEFI-----RNQERLKPQEEKIEEERSKV 396
R + + K+++ ++ L EEE + RN+E++K +EE+++ E KV
Sbjct: 890 RVKAEREKVKKEEERLKAEEEKVKVEKERNKEKVKAEEERLKAEEEKV 937
>AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical
protein T24E12.3 protein.
Length = 288
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 325 EEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 453
++F+ NQE+L +EKI+ ++ + D + S G+ E + D
Sbjct: 236 QKFLNNQEKLNEDQEKIKNDKER-DSISQVENSDGSSESGLAD 277
>AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical
protein Y54F10BM.3 protein.
Length = 745
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 KKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLL-MEEEFIRNQERL-KPQEEKIE 378
K R A G D A K P+ + +K + L+R LL ME+ ++N+E+ KPQ E E
Sbjct: 241 KNRNAGGVDPA-KRPRESAKWLKHVKEVTLKRGGVELLPMEDVIVKNKEKFKKPQNELRE 299
Query: 379 EE 384
E
Sbjct: 300 NE 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,370,220
Number of Sequences: 27780
Number of extensions: 346262
Number of successful extensions: 1363
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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