BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_F05
(794 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 28 0.075
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 26 0.30
AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2 prot... 23 2.1
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 22 6.5
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 22 6.5
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 21 8.6
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 21 8.6
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 28.3 bits (60), Expect = 0.075
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 384 KEGEQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKF 494
K G E++ K KAN + L+ L++ GW++GT KF
Sbjct: 144 KVGLYERIQKLKKANPS---LKTLLAIGGWSFGTQKF 177
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 26.2 bits (55), Expect = 0.30
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +3
Query: 399 EKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVGTNTAFEIPLHYVSQCNTG 578
E VA N + +L +S+ GWN G A NG V S + + L + SQ
Sbjct: 84 ENVANLKSVNPDLKVL---ISIGGWNAGNAILNGIVASSKLRASLISSC-LSFFSQWGYD 139
Query: 579 KNEVTLEFHQNDD 617
++ E+ N D
Sbjct: 140 GIDIDWEYPANAD 152
>AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2
protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 354 NGTLH---RYGGFKEGEQEKVAKFFKANYNKDMLEKELSLKGWNWGTA 488
NGTL +G ++G +V + N N L+ +S+ GWN G A
Sbjct: 66 NGTLQMIDEWGDIEKGNFAEVEALKEINPN---LKTIISIGGWNAGNA 110
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 702 QQVMNKASVISVSGDAIAIFREL 770
+++MN A+ + GD + IF L
Sbjct: 218 EELMNIANYYRILGDTVEIFNSL 240
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 64 ISHCVLXCVTKNFSFTSFQVF 2
+S+ +L NF F FQVF
Sbjct: 285 LSYIILTSFLNNFYFIIFQVF 305
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 237 FGLSFLTSLVPCFLL 193
+G+ FL+ L+P FLL
Sbjct: 122 YGIIFLSILIPHFLL 136
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 237 FGLSFLTSLVPCFLL 193
+G+ FL+ L+P FLL
Sbjct: 122 YGIIFLSILIPHFLL 136
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,822
Number of Sequences: 336
Number of extensions: 4358
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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