Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_F05
         (794 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   1.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.3  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   4.3  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   4.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   10.0 

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = -2

Query: 307 FTSSMSLADICSTLPVLLFLKIMFWSVIFNLPGTMFPFISAETSLYSKNSMFRYLTI 137
           F  S+++AD+   + V+ F   +  +  ++LPG +  F  A     S +S+F  + I
Sbjct: 224 FIVSLAVADLLVAVLVMPFAVYVLVNGSWSLPGFVCDFYIAMDVTCSTSSIFNLVAI 280


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 234 QNIIFKNSKTGKVEQIS 284
           +NI+F +  TGKVE I+
Sbjct: 813 ENILFLDLSTGKVEMIT 829


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 397 CSPSLKPPYLCKVPFLRNKRK 335
           C     P  +C++ +LRNK+K
Sbjct: 63  CIKICAPGCVCRLGYLRNKKK 83


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 397 CSPSLKPPYLCKVPFLRNKRK 335
           C     P  +C++ +LRNK+K
Sbjct: 63  CIKICAPGCVCRLGYLRNKKK 83


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 83  FNLKEIYANFTLLHRVVKYCQITKHGV 163
           FNL E   N+     V ++ Q+ KHG+
Sbjct: 62  FNLVENLDNYNDKEAVNEFMQLLKHGM 88


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +3

Query: 654 PTSEVANDLDAVEAFHQQVMNKASVISVSGDAIA 755
           PT E+  +LD     + + +     ++V+GD ++
Sbjct: 421 PTPEITWELDGKRLSNTERLQVGQYVTVNGDVVS 454


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 83  FNLKEIYANFTLLHRVVKYCQITKHGV 163
           FNL E   N+     V ++ Q+ KHG+
Sbjct: 62  FNLVENLDNYNDKEAVNEFMQLLKHGM 88


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -1

Query: 218 PPWYHVSFYFCGNIVIL*KLHVSLFD 141
           P W    F  C  IV   K+ +  FD
Sbjct: 109 PDWSFAEFKDCSKIVSAFKIAIDKFD 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,640
Number of Sequences: 438
Number of extensions: 5017
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)