Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_F01
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 270 3e-71
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 264 1e-69
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 244 2e-63
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 238 8e-62
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 235 5e-61
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 235 7e-61
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 225 1e-57
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 222 5e-57
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 219 4e-56
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 217 2e-55
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 216 3e-55
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 212 7e-54
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 209 5e-53
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 204 2e-51
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 202 5e-51
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 200 3e-50
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 195 9e-49
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 194 1e-48
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 186 3e-46
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 184 2e-45
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 184 2e-45
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 182 5e-45
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 181 2e-44
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 180 2e-44
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 176 5e-43
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 169 7e-41
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 165 6e-40
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 165 6e-40
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 165 9e-40
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 161 2e-38
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 159 7e-38
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 154 2e-36
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 147 2e-34
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 146 4e-34
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 132 6e-30
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 130 4e-29
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 127 2e-28
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 126 6e-28
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 124 3e-27
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 114 2e-24
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 113 4e-24
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 112 6e-24
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 110 3e-23
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 110 3e-23
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 109 6e-23
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 108 1e-22
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 107 3e-22
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 107 3e-22
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 107 3e-22
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 106 6e-22
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 105 1e-21
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 105 1e-21
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 105 1e-21
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 104 2e-21
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 101 2e-20
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 101 2e-20
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 95 2e-18
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 94 2e-18
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 94 2e-18
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 94 3e-18
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 94 3e-18
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 94 3e-18
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 92 1e-17
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 92 1e-17
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 91 2e-17
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 91 3e-17
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 90 4e-17
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 89 9e-17
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 88 2e-16
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 85 2e-15
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 83 4e-15
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 83 6e-15
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 83 8e-15
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 82 1e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 81 2e-14
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 81 3e-14
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 79 7e-14
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 79 7e-14
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 78 2e-13
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 77 5e-13
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 76 9e-13
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 75 1e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 75 1e-12
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 75 2e-12
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 74 3e-12
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 73 6e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 8e-12
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 72 1e-11
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 72 1e-11
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 71 2e-11
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 70 6e-11
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 68 2e-10
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 64 3e-09
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 8e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 57 3e-07
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 52 2e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 47 4e-04
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 46 0.001
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 43 0.008
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 38 0.29
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 35 2.0
UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1; Pi... 35 2.0
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 33 4.7
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 8.2
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 8.2
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 33 8.2
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 270 bits (661), Expect = 3e-71
Identities = 140/219 (63%), Positives = 149/219 (68%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GTSLSLLIR ELG PGSLIG DQIYNTIVTAHA N L+PL+LG
Sbjct: 2 VGTSLSLLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLG 61
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIF
Sbjct: 62 APDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIF 121
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGISS SFDQ+PLF+ AVGITA AGAIT+
Sbjct: 122 SLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITM 181
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 657
LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 264 bits (648), Expect = 1e-69
Identities = 138/215 (64%), Positives = 147/215 (68%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GTSLSLLIRAELG PGSLIG DQIYNTIVTAHA N LVPL+LG
Sbjct: 26 VGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLG 85
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIF
Sbjct: 86 APDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIF 145
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGISS SFDQ+PLFV AVGITAF AGAIT+
Sbjct: 146 SLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITM 205
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 645
LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 206 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 244 bits (596), Expect = 2e-63
Identities = 130/222 (58%), Positives = 143/222 (64%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IGT+LSLLIRAELG PG+L+G DQIYN IVTAHA N LVPL++G
Sbjct: 30 IGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIG 89
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIF
Sbjct: 90 APDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIF 149
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGISS S Q PLFV +V ITA A IT+
Sbjct: 150 SLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITM 209
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILI PG
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 251
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 238 bits (583), Expect = 8e-62
Identities = 125/222 (56%), Positives = 140/222 (63%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GT+LSLLIRAEL PG+L+G DQIYN IVTAHA N LVPL++G
Sbjct: 29 VGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIG 88
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 89 APDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIF 148
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS S Q PLFV AV +TA A IT+
Sbjct: 149 SLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITM 208
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILI PG
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 250
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 235 bits (576), Expect = 5e-61
Identities = 123/222 (55%), Positives = 140/222 (63%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GT+LSLLIRAEL PG+L+G DQIYN IVTAHA N LVPL++G
Sbjct: 29 VGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIG 88
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 89 APDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIF 148
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS + Q PLFV +V +TA A IT+
Sbjct: 149 SLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITM 208
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILI PG
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 250
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 235 bits (575), Expect = 7e-61
Identities = 123/222 (55%), Positives = 140/222 (63%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GT+LSLLIRAELG PG+L+G D IYN IVTAHA N LVPL++G
Sbjct: 29 LGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIG 88
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IF
Sbjct: 89 APDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIF 148
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS + Q PLFV +V ITA A IT+
Sbjct: 149 SLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITM 208
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILI PG
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 250
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 225 bits (549), Expect = 1e-57
Identities = 116/222 (52%), Positives = 137/222 (61%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G S+SL+IR ELG PGSLIG DQIYN+IVT+HA N L+PL+LG
Sbjct: 13 LGFSMSLIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLG 72
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
+PD++FPR+NN+ F + G GTG TVYPPLS + H G SVDL IF
Sbjct: 73 SPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIF 132
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG SS + D++ LF +V ITA AGAIT+
Sbjct: 133 SLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITM 192
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILI PG
Sbjct: 193 LLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPG 234
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 222 bits (543), Expect = 5e-57
Identities = 119/224 (53%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT+ S+LIR EL PG L G Q+YN I+TAHA N LVP++
Sbjct: 27 IGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVM 86
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLA
Sbjct: 87 IGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLA 146
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLHL+GISS + +LPLFV A+ +TA AGAI
Sbjct: 147 IFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAI 206
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
T+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI PG
Sbjct: 207 TMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPG 250
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 219 bits (536), Expect = 4e-56
Identities = 114/224 (50%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLI--GXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+GT S+LIR EL PG I G Q+YN ++TAHA N VP++
Sbjct: 30 MGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPIL 89
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H G +VDLA
Sbjct: 90 IGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLA 149
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLHL+G+SS + +LPLFV +V +TAF AGAI
Sbjct: 150 IFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAI 209
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
T+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILI PG
Sbjct: 210 TMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPG 253
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 217 bits (531), Expect = 2e-55
Identities = 119/206 (57%), Positives = 137/206 (66%)
Frame = -1
Query: 620 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 441
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 440 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 261
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 260 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIV 81
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 80 L*I*SXPINDPGXPNSARIKRLKDVP 3
L I S PI PG PNSARIK L DVP
Sbjct: 180 L-IWSFPIKLPGCPNSARIKSLSDVP 204
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 216 bits (528), Expect = 3e-55
Identities = 114/207 (55%), Positives = 127/207 (61%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IGT+LSLLIR ELG PGS IG DQ+YN +VTAHA N LVPL+LG
Sbjct: 12 IGTALSLLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLG 71
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIF
Sbjct: 72 APDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIF 131
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS + + LFV +V ITA AGAIT+
Sbjct: 132 SLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITM 191
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF 621
LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 192 LLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 212 bits (517), Expect = 7e-54
Identities = 111/224 (49%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G +S+LIR EL P + L+G QIYN ++TAHA N LVP++
Sbjct: 35 LGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIM 94
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H G +VDLA
Sbjct: 95 IGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLA 154
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLH++G SS S ++PLFV ++ +TAF AGAI
Sbjct: 155 IFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAI 214
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
T+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILI PG
Sbjct: 215 TMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPG 258
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 209 bits (510), Expect = 5e-53
Identities = 109/211 (51%), Positives = 129/211 (61%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IGT+ S+LIR EL +PGS++G D +YN IVTAHA N VPL++G
Sbjct: 30 IGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIG 89
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIF
Sbjct: 90 APDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIF 149
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS + ++PLFV +V ITA AGAIT+
Sbjct: 150 SLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITM 209
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 633
LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 210 LLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 204 bits (497), Expect = 2e-51
Identities = 110/223 (49%), Positives = 131/223 (58%), Gaps = 2/223 (0%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
GT++SL+IR EL PGS L G Q++N +V HA N L+PL++
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAI
Sbjct: 89 GATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F+LHL ISS + +LPLFV ++ ITAF + IT
Sbjct: 149 FALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGIT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI PG
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPG 251
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 202 bits (494), Expect = 5e-51
Identities = 110/223 (49%), Positives = 128/223 (57%), Gaps = 1/223 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPG-SLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
IGT+ S+LIR EL PG I +Q+YN+I+TAHA N L+PL L
Sbjct: 29 IGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGL 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
G PD+ FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAI
Sbjct: 89 GGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F LHL+GISS +L LF AV ITA AG IT
Sbjct: 149 FGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGIT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI PG
Sbjct: 209 MVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPG 251
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 200 bits (487), Expect = 3e-50
Identities = 107/223 (47%), Positives = 130/223 (58%), Gaps = 2/223 (0%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
G+++S++IR EL PGS L G Q++N +V HA N ++PL++
Sbjct: 29 GSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAI
Sbjct: 89 GATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
FSLHL ISS S ++PLFV A+ ITAF + IT
Sbjct: 149 FSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGIT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI PG
Sbjct: 209 MLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPG 251
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 195 bits (475), Expect = 9e-49
Identities = 103/223 (46%), Positives = 127/223 (56%), Gaps = 1/223 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPG-SLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
+GT+ S+LIR EL PG I +Q+YN+I+T+H N L+P+++
Sbjct: 55 LGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILI 114
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H VDL I
Sbjct: 115 GGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGI 174
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F LHL+GISS +L LF AV ITA A AIT
Sbjct: 175 FGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAIT 234
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI PG
Sbjct: 235 MLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPG 277
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 194 bits (474), Expect = 1e-48
Identities = 106/209 (50%), Positives = 123/209 (58%), Gaps = 2/209 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT+ S+LIR EL PG L G Q+YN I+TAHA N LVP++
Sbjct: 27 IGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVM 86
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLA
Sbjct: 87 IGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLA 146
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLHL+GISS + +LPLFV A+ +TA AGAI
Sbjct: 147 IFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAI 206
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF 621
T+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 207 TMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 186 bits (454), Expect = 3e-46
Identities = 101/220 (45%), Positives = 116/220 (52%), Gaps = 2/220 (0%)
Frame = +1
Query: 13 LSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 186
LS+L+R EL PG L G YN I T H N VP+++GAP
Sbjct: 35 LSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAP 94
Query: 187 DIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 366
D++FPR+NN F E G GTG TVYPPLSS +H G SVDL IFS
Sbjct: 95 DMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSF 154
Query: 367 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILL 546
HL GI S LPLFV +V +T+F A AIT+LL
Sbjct: 155 HLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLL 214
Query: 547 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILI PG
Sbjct: 215 FDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPG 254
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 184 bits (448), Expect = 2e-45
Identities = 96/223 (43%), Positives = 128/223 (57%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELG--NPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G SLS+L+R EL NP L+ Q++N ++TAHA N LVPL
Sbjct: 45 VGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQ 104
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+A
Sbjct: 105 IGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMA 164
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IF+LHL+G+SS + +LPLFV +V ITA A +
Sbjct: 165 IFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGL 224
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI P
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVP 267
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 184 bits (448), Expect = 2e-45
Identities = 96/223 (43%), Positives = 128/223 (57%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELG--NPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G SLS+L+R EL NP L+ Q++N ++TAHA N LVPL
Sbjct: 45 VGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQ 104
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+A
Sbjct: 105 IGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMA 164
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IF+LHL+G+SS + +LPLFV +V ITA A +
Sbjct: 165 IFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGL 224
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI P
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVP 267
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 182 bits (444), Expect = 5e-45
Identities = 101/220 (45%), Positives = 124/220 (56%), Gaps = 2/220 (0%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
GT++SL+IR EL PGS L G Q++N +V HA N L+PL++
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAI
Sbjct: 89 GATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F+LHL ISS + +LPLFV ++ ITAF + IT
Sbjct: 149 FALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGIT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 657
+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIM 248
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 181 bits (440), Expect = 2e-44
Identities = 99/194 (51%), Positives = 114/194 (58%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GT+LSLLIRAEL PG+L+G DQIYN IVTAHA N L+PL++G
Sbjct: 18 VGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIG 77
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 78 APDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIF 137
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGISS S Q PLFV AV ITA A IT+
Sbjct: 138 SLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITM 197
Query: 541 LLTDRNLNTSFFDP 582
LLTDRNLNT+FFDP
Sbjct: 198 LLTDRNLNTTFFDP 211
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 180 bits (439), Expect = 2e-44
Identities = 101/227 (44%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPG-SLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
+GT+ S+LIR EL PG I +Q+YN+I+TAHA N L+PL++
Sbjct: 57 LGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMI 116
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSV 345
G PD+AFPR+NNI F I+E G GTG T+ YPPLS +H G SV
Sbjct: 117 GGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSV 176
Query: 346 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 525
DLAIF+LHL+G+SS +L LF +
Sbjct: 177 DLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALF-------GWATWSSRSRYF 229
Query: 526 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI PG
Sbjct: 230 LGITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPG 276
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 176 bits (428), Expect = 5e-43
Identities = 96/212 (45%), Positives = 120/212 (56%), Gaps = 2/212 (0%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
GT++SL+IR EL PG L G +Q++N +V HA N ++PL++
Sbjct: 29 GTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAI
Sbjct: 89 GATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAI 148
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F+LH+ ISS + +LPLFV A+ ITA + +T
Sbjct: 149 FALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVT 208
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 633
+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 209 MLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 169 bits (410), Expect = 7e-41
Identities = 95/220 (43%), Positives = 119/220 (54%), Gaps = 2/220 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT LS +IR EL N GS L G Q +N ++TAHA N L+PL+
Sbjct: 33 IGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLM 92
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H G +VDLA
Sbjct: 93 LGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLA 152
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IFSLHL+G SS ++ +PLF AV TA A +
Sbjct: 153 IFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGL 212
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 654
T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+
Sbjct: 213 TMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKII 252
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 165 bits (402), Expect = 6e-40
Identities = 84/214 (39%), Positives = 117/214 (54%), Gaps = 2/214 (0%)
Frame = +1
Query: 28 RAELGNPGSLIGXDQ--IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 201
+A LG L G ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 202 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 381
R+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 202 RLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGA 261
Query: 382 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 561
SS + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 262 SSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNF 321
Query: 562 NTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
T+FFDPAGGGDPIL+QH+F FFGHPEVYI+I P
Sbjct: 322 GTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILP 355
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 165 bits (402), Expect = 6e-40
Identities = 90/223 (40%), Positives = 124/223 (55%), Gaps = 4/223 (1%)
Frame = +1
Query: 1 IGTSLSLLIRAELG--NPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G SLS+L+R EL NP L+ Q++N ++TAHA N LVPL
Sbjct: 45 VGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQ 104
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+A
Sbjct: 105 IGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMA 164
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IF+LHL+G+SS + +LPLFV +V ITA A +
Sbjct: 165 IFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGL 224
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILI 657
T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIII 267
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 165 bits (401), Expect = 9e-40
Identities = 100/242 (41%), Positives = 127/242 (52%), Gaps = 20/242 (8%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPG----------------SLIGXDQIYNTIVTAHAXXXXXXXXXX 132
IG ++S L+RAEL PG +L ++N ++TAH
Sbjct: 53 IGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNVLITAHGLIMVFFMVMP 112
Query: 133 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TV 300
N VP+++GAPD+AFPR+NNI F V NGAGTG TV
Sbjct: 113 AMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTV 172
Query: 301 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 480
Y PLS++ G +VD+AI SLH+AG SS + ++PLFV +V
Sbjct: 173 YAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSV 231
Query: 481 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIX 660
+TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+I
Sbjct: 232 LVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMIL 291
Query: 661 PG 666
PG
Sbjct: 292 PG 293
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 161 bits (390), Expect = 2e-38
Identities = 87/156 (55%), Positives = 96/156 (61%)
Frame = +1
Query: 169 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 348
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 349 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 528
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 529 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 636
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 159 bits (385), Expect = 7e-38
Identities = 84/209 (40%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELG--NPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G SLS+L+R EL NP L+ Q++N ++TAHA N LVPL
Sbjct: 45 VGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQ 104
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+A
Sbjct: 105 IGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMA 164
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
IF+LHL+G+SS + +LPLFV +V ITA A +
Sbjct: 165 IFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGL 224
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF 621
T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 154 bits (373), Expect = 2e-36
Identities = 82/222 (36%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
G+ LS+LIR EL +PG G Q+YN+++T H N ++PL+L
Sbjct: 39 GSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLML 98
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
GAP++AFPR+N + F + G G+ T YPPLS S+D I
Sbjct: 99 GAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMI 157
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
LH GI S + DQ+ +FV +T+F AG++
Sbjct: 158 LGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLL 217
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++I P
Sbjct: 218 FLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILP 259
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 147 bits (357), Expect = 2e-34
Identities = 82/223 (36%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELG--NPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+G SL IR EL G L G Q YN ++T+H N +P++
Sbjct: 30 VGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVM 89
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
G PD+ FPR+NN+ F + E G G G T+YP L H + D
Sbjct: 90 AGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFV 149
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 534
+F++HL GISS SF LF+ A ITA AG +
Sbjct: 150 MFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGV 209
Query: 535 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++ P
Sbjct: 210 TLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLP 252
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 146 bits (354), Expect = 4e-34
Identities = 80/221 (36%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 183
G SLS +R EL +PG + +Y++I+T HA N +PL++
Sbjct: 32 GLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKI 91
Query: 184 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 363
D++ PR+NN+ + G G G T+YPPLS++ G +DLA+FS
Sbjct: 92 KDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFS 151
Query: 364 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXAGAITI 540
LH+AG+SS F L P+ + + T+ A +T+
Sbjct: 152 LHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTL 211
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILI P
Sbjct: 212 LLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILP 252
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 132 bits (320), Expect = 6e-30
Identities = 78/178 (43%), Positives = 93/178 (52%), Gaps = 2/178 (1%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT+ S+LIR EL PG L G Q+YN I+TAHA N LVP++
Sbjct: 27 IGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVM 86
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 354
+GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLA
Sbjct: 87 IGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLA 146
Query: 355 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 528
IFSLHL+GISS + +LPLFV A+ +TA AG
Sbjct: 147 IFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 130 bits (313), Expect = 4e-29
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPG-SLIGXD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 171
IG +S+LIR EL G +I D +IYN + T H N L P+
Sbjct: 34 IGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPV 93
Query: 172 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 351
+LG D+ +PR+N +E G+GTG T+YPPLS+++++ G +D
Sbjct: 94 LLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDF 151
Query: 352 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 531
IF L AGI+S D++ ++ +T+F
Sbjct: 152 IIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAV 211
Query: 532 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+I PG
Sbjct: 212 FLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPG 256
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 127 bits (307), Expect = 2e-28
Identities = 82/222 (36%), Positives = 103/222 (46%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IG LSLLIR L +P + +YN +VT H N +P+ L
Sbjct: 127 IGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLC 186
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
D+ PR+N++ G G G T+YPPLS G VD +F
Sbjct: 187 LDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMF 243
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAG+SS S + V A T+ A IT+
Sbjct: 244 SLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSLPVLASGITM 298
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LI PG
Sbjct: 299 LLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPG 340
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 126 bits (303), Expect = 6e-28
Identities = 75/224 (33%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGSLIGXDQ---IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
G LS+++R EL + I + +YN I T H N +P++
Sbjct: 32 GFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPIL 91
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDL 351
G+P++A+PRIN+I E G GTG T+YPPLS+++ +VD+
Sbjct: 92 CGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDV 151
Query: 352 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 531
IF L ++G++S + L + ++ IT+ G
Sbjct: 152 IIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGG 211
Query: 532 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+ +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILI P
Sbjct: 212 VLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILP 255
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 124 bits (298), Expect = 3e-27
Identities = 78/221 (35%), Positives = 107/221 (48%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G S SLL R +L P S++ D +YN VT H N L+P
Sbjct: 26 LGMSFSLLFRLQLAFP-SILTSD-VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCN 83
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
PD+ FPR+N + F ++ + A G T YPPLSS SV+ ++F
Sbjct: 84 LPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVF 134
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SLHLAGI+S + L LF ++ + + A IT+
Sbjct: 135 SLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGITL 192
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+LTD++L T F+D GGDP+LYQHLF FFGHPEVY++I P
Sbjct: 193 ILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILP 233
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 114 bits (274), Expect = 2e-24
Identities = 80/229 (34%), Positives = 109/229 (47%), Gaps = 8/229 (3%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G + +L+R EL +PG + + YN+++T+H N L+PL++G
Sbjct: 111 VGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIG 169
Query: 181 APDIAFPRINNIRFXXX--XXXXXXXXXXXIVEN-GAGTG*TVYPPLS-----SNIAHRG 336
A D+AFPRIN I F I E A TG T+Y PLS N A+ G
Sbjct: 170 ADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG 229
Query: 337 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 516
VDL + LHL+G+S+ S+ L +F + +
Sbjct: 230 --VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFP 287
Query: 517 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++ P
Sbjct: 288 LLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLP 334
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 113 bits (272), Expect = 4e-24
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 6/227 (2%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXD----QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 168
+G +S+LIR EL G I IYN +T H N L+P
Sbjct: 35 LGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNYLIP 94
Query: 169 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRS 342
+++G +++ PR+N I F ++ +G T+YPPLS+ A G +
Sbjct: 95 MLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVN 154
Query: 343 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 522
+DL++ +H+ GISS +F + ++ ++ +T+
Sbjct: 155 IDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSLPIL 214
Query: 523 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++I P
Sbjct: 215 GVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILP 259
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 112 bits (270), Expect = 6e-24
Identities = 69/222 (31%), Positives = 97/222 (43%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G +LL+R +L P + +++N + T H N VPL++G
Sbjct: 49 VGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIG 107
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D+AFPR+N+ F + + G Y PLSS + VD I
Sbjct: 108 ARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWII 167
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
L + GI S S ++PLFV + + A A+ +
Sbjct: 168 GLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAM 227
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
LL DR L ++FFDP GG +L+QH F FGHPEVYILI PG
Sbjct: 228 LLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPG 269
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 110 bits (265), Expect = 3e-23
Identities = 72/222 (32%), Positives = 100/222 (45%), Gaps = 1/222 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGS-LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
+G L+LL+R +L P + IG D+ YN I T H LVPL++
Sbjct: 46 LGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMV 103
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
G IAFPR+N + V+ G G Y PLS G+ D+
Sbjct: 104 GTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWA 163
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
+ +S+ S D++PLFV ++ +T+F A T
Sbjct: 164 QMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIAST 223
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ P
Sbjct: 224 SLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLP 265
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 110 bits (264), Expect = 3e-23
Identities = 66/202 (32%), Positives = 88/202 (43%), Gaps = 6/202 (2%)
Frame = +1
Query: 76 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 255
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 256 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 432
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 433 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 597
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 598 PILYQHLF*FFGHPEVYILIXP 663
PIL+QHLF FGHPEVYI+I P
Sbjct: 266 PILWQHLFWIFGHPEVYIMILP 287
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 109 bits (262), Expect = 6e-23
Identities = 72/221 (32%), Positives = 95/221 (42%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IG S + +R EL P ++YN ++T H N L+PL++G
Sbjct: 44 IGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVG 102
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
D+AFPR+N + F V G T YPPLS G +L I
Sbjct: 103 TEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWIL 159
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
SL L G SS +PLF A+ T+ A A+ +
Sbjct: 160 SLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALIL 219
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
L D TSFF+P GGGDP++YQHLF F+ HP VYI+I P
Sbjct: 220 LSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILP 260
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 108 bits (260), Expect = 1e-22
Identities = 71/222 (31%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G +LLIR EL PG I YN T H N ++PL+LG
Sbjct: 59 VGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLG 118
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D+AFPR+N + ++ G TG T Y P S AH +V +F
Sbjct: 119 AKDVAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGWTFYTPYS---AHTTTTVAPVLF 174
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ G SS ++ ++PLFV A+ T+ G + +
Sbjct: 175 GAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATSCIQVLATPVI-GLLLV 233
Query: 541 LLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
L+T NL FDPA GGDP+L+QHLF F+ HP VYI++ P
Sbjct: 234 LVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLP 275
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 107 bits (256), Expect = 3e-22
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 3/224 (1%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G L++++R EL P + + +YN + T H N L+P ++G
Sbjct: 53 VGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIG 111
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDL 351
APD+AFP++N F G A +G YPP+S + + H L
Sbjct: 112 APDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFL 171
Query: 352 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 531
I ++ L+GISS F ++P+FV G
Sbjct: 172 WILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGG 231
Query: 532 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+ P
Sbjct: 232 AVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLP 275
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 107 bits (256), Expect = 3e-22
Identities = 66/221 (29%), Positives = 96/221 (43%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G +LLIR EL PG I YN + T H N L+P+++G
Sbjct: 52 LGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIG 111
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D+AFP++N + F +V+ GA TG T Y P S+ + V L F
Sbjct: 112 AKDVAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYTPYSTTTITKVVPVLLGAF 170
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
L G SS + +LPLFV ++ T+ ++ +
Sbjct: 171 IL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLL 227
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+ + FDPA GGDP+L+QH F F+ HP VYI++ P
Sbjct: 228 VAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLP 268
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 107 bits (256), Expect = 3e-22
Identities = 70/221 (31%), Positives = 94/221 (42%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IG +LL+R +LG P + +YN + T H N +VPL++G
Sbjct: 48 IGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIG 106
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D+AFPR+N + V G Y PL+ VD I
Sbjct: 107 ARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIV 166
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ L G++S + +++PLFV + AF A
Sbjct: 167 GIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQ 226
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILI P
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILP 267
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 106 bits (254), Expect = 6e-22
Identities = 63/206 (30%), Positives = 92/206 (44%)
Frame = +1
Query: 46 PGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 225
PG + + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 226 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 405
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 406 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 585
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 586 GGGDPILYQHLF*FFGHPEVYILIXP 663
GGDP++YQ++F F+ HP VY+ + P
Sbjct: 180 KGGDPLIYQNIFWFYSHPVVYVQVLP 205
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 105 bits (252), Expect = 1e-21
Identities = 68/222 (30%), Positives = 96/222 (43%), Gaps = 1/222 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G ++LLIRAEL PG ++ +N + T H N ++PL +G
Sbjct: 55 LGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIG 113
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAI 357
APD+AFPR+N F + GA G T+Y PLS I G D+ I
Sbjct: 114 APDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWI 173
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
+ GI S + ++P+F + + + A
Sbjct: 174 VGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAAL 233
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+L DR L +DPA GG +L+QHLF FFGHPEVY+L P
Sbjct: 234 GVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALP 274
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 105 bits (251), Expect = 1e-21
Identities = 57/105 (54%), Positives = 66/105 (62%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IGT+LSLLIRAELG PG+L+G DQ N IVTAHA N LVPL++G
Sbjct: 30 IGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIG 89
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 315
APD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 90 APDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 105 bits (251), Expect = 1e-21
Identities = 67/217 (30%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Frame = +1
Query: 19 LLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 198
LL+R EL + +YN ++T+H N +PL++ A D+AF
Sbjct: 91 LLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAF 149
Query: 199 PRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 372
PRIN I F ++ A T T+Y PLS ++ +VD+ + LHL
Sbjct: 150 PRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHL 207
Query: 373 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 552
G+S+ + L +F + + A+ +LL D
Sbjct: 208 TGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGSALIMLLLD 267
Query: 553 RNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
RN T+FF AGG DPI +QHLF FFGHPEVY+L+ P
Sbjct: 268 RNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLP 303
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 104 bits (249), Expect = 2e-21
Identities = 71/223 (31%), Positives = 98/223 (43%), Gaps = 2/223 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
I SL+LL R +L P S Y VT H N +VPL +G
Sbjct: 38 IAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQIG 96
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAI 357
A D+AFPR+N + + E+GA G T+Y PL++ I G +DLA
Sbjct: 97 ARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAA 156
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
++ L +S + ++P+F ++ T
Sbjct: 157 LAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGGA 216
Query: 538 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFP 257
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 101 bits (241), Expect = 2e-20
Identities = 58/129 (44%), Positives = 70/129 (54%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+GTSLSL+IR ELG PGSL+ DQ+YN +VTAH N LVPL+LG
Sbjct: 13 LGTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLG 72
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
APD+AFPR+NN+ F + G + PL G SVDLAIF
Sbjct: 73 APDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIF 130
Query: 361 SLHLAGISS 387
LHLAG+SS
Sbjct: 131 PLHLAGVSS 139
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 101 bits (241), Expect = 2e-20
Identities = 62/217 (28%), Positives = 92/217 (42%), Gaps = 1/217 (0%)
Frame = +1
Query: 16 SLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 195
SLLIR +L P + + YN I+T H N +VPL+LGA D+A
Sbjct: 46 SLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVA 105
Query: 196 FPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 372
PR+N + GA G T Y P S A VD + ++ L
Sbjct: 106 LPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILL 162
Query: 373 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 552
G SS S ++P++V +V + A ++L +
Sbjct: 163 LGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLE 222
Query: 553 RNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
R + S+F+PA GGDP+L+Q F F+ HP VY+++ P
Sbjct: 223 RKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLP 259
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 94.7 bits (225), Expect = 2e-18
Identities = 56/221 (25%), Positives = 94/221 (42%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G ++ IR +L P + Q YN ++T H N +VPL +G
Sbjct: 41 VGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIG 99
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
A D++FP +N + F + G T Y LS + +G +D +
Sbjct: 100 ARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVL 157
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
L ++G+ + ++ +LPLF + + + +
Sbjct: 158 GLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLAL 217
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
++ DR T+FF+P GG+ ++++HLF FGHPEVYILI P
Sbjct: 218 MMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILP 258
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 94.3 bits (224), Expect = 2e-18
Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 2/219 (0%)
Frame = +1
Query: 13 LSLLIRAELGNPGSLIGXD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 189
+++LIR EL G I D +YNT + H N +PL++GA D
Sbjct: 35 MAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKD 94
Query: 190 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 369
+AFPR+N + + + T YPP S I H + FS+
Sbjct: 95 VAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVL 151
Query: 370 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILL 546
L G +S +++L +FV A + AF G A+T+L
Sbjct: 152 LLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLT 210
Query: 547 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
D+ + T FFD A GGD + YQ+LF F+ HP VY++ P
Sbjct: 211 FDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLP 249
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 94.3 bits (224), Expect = 2e-18
Identities = 61/221 (27%), Positives = 90/221 (40%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G L++LIRA+L P S + YN + T H L+P +LG
Sbjct: 46 VGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLG 104
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
+ D+AFPR+ F + +G +YPPLSS + G + D +
Sbjct: 105 SRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLI 164
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ IS+ S ++P+F +TA +
Sbjct: 165 GITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSIL 224
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
L +R + FF A GGD +L+QHLF FGHPEVYI+ P
Sbjct: 225 LELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLP 265
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 93.9 bits (223), Expect = 3e-18
Identities = 72/208 (34%), Positives = 84/208 (40%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 183
G L R L G +IG QI VTA A L PL +GA
Sbjct: 20 GXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGA 79
Query: 184 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 363
P +A PR+ N+ F + G G VYPP SS +AH +VDL IF
Sbjct: 80 PXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFX 139
Query: 364 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 543
LHLAGISS ++ LF A AIT+L
Sbjct: 140 LHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITML 199
Query: 544 LTDRNLNTSFFDPAGGGDPILYQHLF*F 627
R N SFF P G P + F F
Sbjct: 200 XXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 93.9 bits (223), Expect = 3e-18
Identities = 59/176 (33%), Positives = 82/176 (46%), Gaps = 6/176 (3%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 330
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 331 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 510
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 511 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILIXP 663
A +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+ P
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLP 259
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 93.9 bits (223), Expect = 3e-18
Identities = 70/222 (31%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGS-LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
+G +L+LLIRAEL PG+ I +N + T H N VP+++
Sbjct: 37 LGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMV 95
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 357
D+A+P++N I F + T PP S I+ G + D+ I
Sbjct: 96 RYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPAADMWI 149
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
F L + GISS S Q+PL + ++ A A+
Sbjct: 150 FGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTFAAALL 209
Query: 538 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+LLTDR + FF+PA GGDPI Y HLF F HPEVY+L+ P
Sbjct: 210 MLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIP 251
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 92.3 bits (219), Expect = 1e-17
Identities = 59/216 (27%), Positives = 89/216 (41%)
Frame = +1
Query: 16 SLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 195
+LL+R +L P + + YN + T H L+PL++GA D+
Sbjct: 77 ALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMIGARDLV 135
Query: 196 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 375
FPR+ + + + G +Y PLS++ G S D + + LA
Sbjct: 136 FPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWLIGITLA 195
Query: 376 GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 555
I+S S ++P+ + + TAF +L +R
Sbjct: 196 EIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAER 255
Query: 556 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
L FFD GGDP+L+QHLF FGHPEVYI+ P
Sbjct: 256 LLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLP 291
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 92.3 bits (219), Expect = 1e-17
Identities = 60/215 (27%), Positives = 87/215 (40%)
Frame = +1
Query: 19 LLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 198
L++RA+L P + YN I T H N +VPL +GA D+AF
Sbjct: 76 LMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAF 134
Query: 199 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 378
P +NN+ F ++ G T Y PL+SN G + + L +AG
Sbjct: 135 PYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAG 194
Query: 379 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 558
I + + ++P+F IT A+ +L DR
Sbjct: 195 IGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRL 254
Query: 559 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
FF GG P+L+ +LF +GHPEVYI+I P
Sbjct: 255 FGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILP 289
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 91.5 bits (217), Expect = 2e-17
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 15/213 (7%)
Frame = +1
Query: 70 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 249
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 250 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 417
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 418 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 582
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 583 ------AGGGDPILYQHLF*FFGHPEVYILIXP 663
AGGG P+L+QHLF F+ HP VYI+I P
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILP 298
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 90.6 bits (215), Expect = 3e-17
Identities = 61/221 (27%), Positives = 90/221 (40%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G L+LL+R +L P + + YN + + H ++PL+LG
Sbjct: 53 LGVILALLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLG 111
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
D+ FPR+N + ++ G YPPL+ G +D
Sbjct: 112 TRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTT 171
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ IS+ S +++P+FV AV + +F A +
Sbjct: 172 VVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLM 231
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
L DR FF A GDPIL+QHLF FFGHPEVYI+ P
Sbjct: 232 LALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIP 271
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 90.2 bits (214), Expect = 4e-17
Identities = 73/233 (31%), Positives = 98/233 (42%), Gaps = 16/233 (6%)
Frame = +1
Query: 13 LSLLIRAELGNPG--SLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 186
LS L+R +LG PG S I +Q Y +T H N L+PL++GA
Sbjct: 59 LSWLMRLQLGFPGTFSFIDANQ-YLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGAR 117
Query: 187 DIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAI 357
D+ FP +N + + V G G G T+YPP + S + + L +
Sbjct: 118 DMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLML 177
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAI 534
SL L I + +LPL V + T G++
Sbjct: 178 SSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSV 237
Query: 535 TILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILIXP 663
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ P
Sbjct: 238 MLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALP 289
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 89.0 bits (211), Expect = 9e-17
Identities = 59/221 (26%), Positives = 91/221 (41%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
IG L++LIRA+L +P S + Y + T H L+P +LG
Sbjct: 46 IGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLG 104
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
+ D+A+PR++ F + +G +YPPL+S + G + D +
Sbjct: 105 SRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLL 164
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ IS+ S D++P++ +TA +
Sbjct: 165 GITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSIL 224
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
L +R FF A GGD +L+QHLF FGHPEVYI+ P
Sbjct: 225 LELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLP 265
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 88.2 bits (209), Expect = 2e-16
Identities = 59/221 (26%), Positives = 91/221 (41%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G +L++R +L P + + Y+++ T H N L PL+LG
Sbjct: 66 LGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLG 124
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
+ D+AFPR+ + + G Y PL+S G ++D+
Sbjct: 125 SRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGL 184
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
+ L GIS+ S D+LP+ V + + A +
Sbjct: 185 GMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLL 244
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
L DRN T FFD A GG P+L+QHLF F HP VY+++ P
Sbjct: 245 LWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLP 285
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 84.6 bits (200), Expect = 2e-15
Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 1/218 (0%)
Frame = +1
Query: 13 LSLLIRAELGNP-GSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 189
L L++R +L P L+G D YN I T H L+P +L A D
Sbjct: 60 LGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQMLAARD 117
Query: 190 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 369
+ FPR++ + G +YPPL+ G + D + +
Sbjct: 118 LPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFWLLGIG 177
Query: 370 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 549
IS+ S ++P+F A+ I A A +L
Sbjct: 178 FIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEI 237
Query: 550 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+R+ FF GGDP+L+QHLF FFGHPEVYI+ P
Sbjct: 238 ERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLP 275
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 83.4 bits (197), Expect = 4e-15
Identities = 63/212 (29%), Positives = 90/212 (42%), Gaps = 14/212 (6%)
Frame = +1
Query: 70 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 249
+ Y +VT H N L+PL +GA D+A +N + +
Sbjct: 100 EFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSSVI 159
Query: 250 XXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 417
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 160 MFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITT 219
Query: 418 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----A 585
SF +LPL + A ITA A +L+ DR+L TSFF A
Sbjct: 220 VINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIA 279
Query: 586 G------GGDPILYQHLF*FFGHPEVYILIXP 663
G GG P+L+QHLF F GHPEVYI++ P
Sbjct: 280 GEALHHQGGSPVLFQHLFWFLGHPEVYIVLIP 311
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 83.0 bits (196), Expect = 6e-15
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 4/225 (1%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G + ++R +L PG + + +N + T HA N +PL++G
Sbjct: 46 VGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIG 104
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSNIAHRGRSVD 348
A D+AFPR+N + ++ G G Y L+S G D
Sbjct: 105 ARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGPD 164
Query: 349 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 528
L L GI + + ++P+FV +T+
Sbjct: 165 FWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTV 224
Query: 529 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILI P
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILP 269
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 82.6 bits (195), Expect = 8e-15
Identities = 49/110 (44%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT+ S+LIR EL PG L G Q+YN I+TAHA N LVP++
Sbjct: 27 IGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVM 86
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 324
+GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 87 IGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 82.2 bits (194), Expect = 1e-14
Identities = 56/196 (28%), Positives = 80/196 (40%)
Frame = +1
Query: 76 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 255
Y+ I TAH N +VPL +GA D+AFP +N++ F
Sbjct: 100 YDQIFTAHGVIMIIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVN 158
Query: 256 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 435
V N A TG YPPL+ VD I++L ++GI +
Sbjct: 159 LSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRA 218
Query: 436 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 615
+P+F GA+ +L DR L+ FF GG+ ++Y +
Sbjct: 219 PGMKLMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLN 278
Query: 616 LF*FFGHPEVYILIXP 663
LF +GHPEVYIL+ P
Sbjct: 279 LFWAWGHPEVYILVLP 294
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +1
Query: 169 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 348
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 349 LAIFS 363
LAI+S
Sbjct: 61 LAIYS 65
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 468 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 635
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 80.6 bits (190), Expect = 3e-14
Identities = 56/196 (28%), Positives = 78/196 (39%)
Frame = +1
Query: 76 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 255
Y+ I TAH N VPL +GA D+AFP +N++ F
Sbjct: 99 YDQIFTAHGVIMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVN 157
Query: 256 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 435
V A TG YPPL+ G VD I++L L+G+ +
Sbjct: 158 ISLGVGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRA 217
Query: 436 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 615
+P+F A+ +L DR L+ F GG+P++Y +
Sbjct: 218 PGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVN 277
Query: 616 LF*FFGHPEVYILIXP 663
LF +GHPEVYILI P
Sbjct: 278 LFWAWGHPEVYILILP 293
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 79.4 bits (187), Expect = 7e-14
Identities = 54/221 (24%), Positives = 82/221 (37%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 180
+G L+L IR +L P + YN ++T HA N +PL LG
Sbjct: 49 LGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLG 108
Query: 181 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 360
D+A PR+N G T Y PL+ + G SV +
Sbjct: 109 VRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMVAV 168
Query: 361 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 540
L+ G+ S ++P+F ++ T+ A +
Sbjct: 169 ILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALL 226
Query: 541 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+ L S F+P GG P+LYQ F F+ HP VY+++ P
Sbjct: 227 TYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLP 267
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 79.4 bits (187), Expect = 7e-14
Identities = 54/171 (31%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 330
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 331 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 510
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVWGFFTTAILMIIA 196
Query: 511 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+ +R T FFD A GG P+L+Q LF FFGHPEVYILI P
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILP 247
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 77.8 bits (183), Expect = 2e-13
Identities = 53/217 (24%), Positives = 85/217 (39%)
Frame = +1
Query: 13 LSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 192
L++L+R +L PG+ +N T H L+P +LGA D+
Sbjct: 78 LAVLMRVQLAVPGNDFLSADRFNQFFTMHGSAMMFLFAVPMFEAISII-LLPALLGARDL 136
Query: 193 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 372
FPR++ + + + +G +YPPL++ G D+ + L
Sbjct: 137 PFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGLGSDIWLLGLSF 194
Query: 373 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 552
++S + +PL+ V + + +
Sbjct: 195 IEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPPLIAGDLLFEME 254
Query: 553 RNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
R + FFDP GGDP+L+QHLF FGHPEVYI+ P
Sbjct: 255 RGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLP 291
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 76.6 bits (180), Expect = 5e-13
Identities = 54/217 (24%), Positives = 86/217 (39%)
Frame = +1
Query: 13 LSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 192
++L++R +L + +YN + T H L+P +LGA D+
Sbjct: 119 VALMMRTQLAVAENDFIGPALYNQLFTMHGTVMMFLFAVPAVEAMGIL-LLPNMLGARDL 177
Query: 193 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 372
FPR++ F V G + PPL++ G + D + +
Sbjct: 178 PFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGYNADFWLLGIGF 237
Query: 373 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 552
IS+ + ++P+F A+ + A A +L +
Sbjct: 238 IEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPAVILATALLELE 297
Query: 553 RNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
R + FF GGDP+L+QHLF FFGHPEVYI+ P
Sbjct: 298 RAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLP 334
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 75.8 bits (178), Expect = 9e-13
Identities = 46/110 (41%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
IGT LS +IR EL N GS L G Q +N ++TAHA N L+PL+
Sbjct: 33 IGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLM 92
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 324
LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 93 LGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLI--GXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 174
+GT S+LIR EL PG+ I G Q+YN ++TAHA N VP++
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPIL 90
Query: 175 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 300
+G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 91 IGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 75.4 bits (177), Expect = 1e-12
Identities = 46/128 (35%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Frame = +1
Query: 289 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 459
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 460 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 639
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 640 EVYILIXP 663
EVY+LI P
Sbjct: 403 EVYVLIIP 410
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGSLI--GXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
G +L+ +IR EL +P S G Y +VTAH N L+P +
Sbjct: 78 GAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHV 137
Query: 178 GAPDIAFPRINNIRF 222
G+ D+A+PR+N+I F
Sbjct: 138 GSKDVAYPRLNSIGF 152
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 74.9 bits (176), Expect = 2e-12
Identities = 51/170 (30%), Positives = 70/170 (41%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 333
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 514 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
L DR L+ FF GG+ + + ++F FGHPEVYILI P
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILP 313
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 74.1 bits (174), Expect = 3e-12
Identities = 61/224 (27%), Positives = 90/224 (40%), Gaps = 16/224 (7%)
Frame = +1
Query: 40 GNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 219
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 220 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 384
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 385 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 564
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 565 TSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILIXP 663
TSFF P+G GG +L+QHLF FFGHPEVYI I P
Sbjct: 254 TSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILP 297
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 72.9 bits (171), Expect = 6e-12
Identities = 53/212 (25%), Positives = 80/212 (37%), Gaps = 14/212 (6%)
Frame = +1
Query: 70 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 249
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 250 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 420
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 421 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 588
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 589 -------GGDPILYQHLF*FFGHPEVYILIXP 663
GG P+L+QHLF F+ HP VYI++ P
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLP 301
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 307 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 486
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 487 TAFXXXXXXXXXAGAITILLTDR 555
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 141 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 266
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 72.1 bits (169), Expect = 1e-11
Identities = 46/170 (27%), Positives = 72/170 (42%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 333
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 514 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+ + DR L+T F+ GG +LY +L +GHPEVYILI P
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILP 288
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 71.7 bits (168), Expect = 1e-11
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Frame = +1
Query: 160 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 336
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 337 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 516
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 517 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
G +LL ++ S++ GG +++++LF +FGHPEVY+L+ PG
Sbjct: 231 EITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPG 279
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 71.3 bits (167), Expect = 2e-11
Identities = 59/233 (25%), Positives = 89/233 (38%), Gaps = 13/233 (5%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 183
G L+LL R EL + G+ + YN V+ H N LVPL +GA
Sbjct: 40 GGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQIGA 98
Query: 184 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN--IAHRGRSVDLAI 357
D+AFPR+N + + G T+Y PL++ I G +
Sbjct: 99 DDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIPGEGLGATSVV 158
Query: 358 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 537
+L + + +P+F ++ +T + A+
Sbjct: 159 LALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLFAFAALLAALM 218
Query: 538 ILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILIXP 663
IL +D L T++F D G +L+ HLF FFGHPEVYI+ P
Sbjct: 219 ILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFP 271
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +1
Query: 556 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXPG 666
N T+FFDPAGGGD IL+QHLF FFGHPEVYILI PG
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPG 227
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 177
GT++S++IR EL PG+ L G Q++N +V HA N L+PL++
Sbjct: 29 GTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMI 88
Query: 178 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 300
GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 89 GASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 64.1 bits (149), Expect = 3e-09
Identities = 43/170 (25%), Positives = 69/170 (40%)
Frame = +1
Query: 154 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 333
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 514 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++ P
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLP 312
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 265 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 387
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = +1
Query: 451 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 630
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 631 GHPEVYILI 657
GH +V LI
Sbjct: 72 GHTDVLFLI 80
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = +3
Query: 555 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNXTRI 668
K KYIIF S W F+STFILIFWT SLYFN T I
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSI 44
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 471 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 623
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 47.2 bits (107), Expect = 4e-04
Identities = 37/140 (26%), Positives = 44/140 (31%)
Frame = +3
Query: 147 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YR 326
I KL P NK +KIL TPL Y N C K C + +NSLP Y
Sbjct: 62 IRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYL 121
Query: 327 T*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXX 506
T R +F T CM +YS
Sbjct: 122 TLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTS 181
Query: 507 XTTCFSWSYYNIINRSKLKY 566
+ S+YNI K KY
Sbjct: 182 FSPSIGSSHYNITYWPKPKY 201
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +1
Query: 1 IGTSLSLLIRAELGNPGSLIGXDQIYNTIVTAHA 102
IG+S+S+LIR EL GS++ +QIYNT+VT+HA
Sbjct: 13 IGSSMSMLIRLELETCGSVLRSEQIYNTLVTSHA 46
Score = 40.3 bits (90), Expect = 0.041
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 334 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 513
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 514 XXXAGAITILLTDRNLNT 567
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 42.7 bits (96), Expect = 0.008
Identities = 37/168 (22%), Positives = 60/168 (35%)
Frame = +1
Query: 160 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 339
L+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 180 LIPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGS 235
Query: 340 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 519
+ + ++S S ++P+FV + A
Sbjct: 236 GIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPA 295
Query: 520 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIXP 663
+ L+D + F+ G P+ Y F F HPEVY+ I P
Sbjct: 296 TYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILP 342
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 37.5 bits (83), Expect = 0.29
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGS--LIGXDQIYNTIVTAHA 102
GT++SL+IR EL PGS L G Q++N +V HA
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 34.7 bits (76), Expect = 2.0
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 483 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNXT 662
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 663 RI 668
I
Sbjct: 154 SI 155
>UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1;
Pichia guilliermondii|Rep: Cytochrome c oxidase subunit
1 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 168
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 1 IGTSLSLLIRAEL--GNPGSLIGXDQIYNTIVTAHA 102
+GT +S++IR EL GN G +Q YN ++T HA
Sbjct: 6 VGTGMSVIIRMELSSGNSQFFHGNNQAYNVLITGHA 41
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 625 FFGHPEVYILIXPG 666
FFGHPEVYILI PG
Sbjct: 2 FFGHPEVYILILPG 15
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 554 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 432
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 608 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 471
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 4 GTSLSLLIRAELGNPGS--LIGXDQIYNTIV 90
GT++SL+IR EL PGS L G Q++N +V
Sbjct: 29 GTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,438,153
Number of Sequences: 1657284
Number of extensions: 7916363
Number of successful extensions: 18175
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 16594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17885
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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