Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_E22
         (774 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0158 + 32052426-32052529,32052645-32052702,32052847-320529...    29   5.4  
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989...    28   7.2  

>03_06_0158 +
           32052426-32052529,32052645-32052702,32052847-32052983,
           32053824-32053899,32053965-32054017,32054415-32054896,
           32055097-32055184,32055482-32055665,32056443-32056640,
           32057351-32057534,32057982-32058109,32058236-32058317,
           32058444-32058496,32058625-32058700,32059253-32059314
          Length = 654

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 675 DRIVQTINFTNVEVNFVMFIFTEES 601
           + +++T+N TN E N   F FTE S
Sbjct: 243 ESVLKTVNLTNGEANLGSFFFTESS 267


>09_02_0496 -
           9892242-9892499,9892956-9893045,9893046-9893094,
           9893330-9893557,9894095-9894261,9894312-9894395,
           9894614-9894820,9894919-9895251,9895371-9895513,
           9895607-9895723,9895824-9895980,9896054-9896157,
           9896272-9896432,9896518-9896707,9896732-9896834,
           9896950-9897231,9897327-9897649,9897750-9897786,
           9898109-9898162,9898292-9898368,9898449-9898502,
           9898738-9898822,9900289-9900426,9900592-9900603
          Length = 1150

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 379 QLIYI*IRKHSFVIMKTMDFNILDSIPDLDNLKTFTERYFSKRYLINVD 525
           Q++Y   R H     K++ F  L+ I   D L+  T R   K+Y I+ D
Sbjct: 227 QVVYSGPRDHVLEFFKSLGFKCLERIGVADFLQEVTSRKDQKQYWIHGD 275


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,987,453
Number of Sequences: 37544
Number of extensions: 275781
Number of successful extensions: 542
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)