Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_E22
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21324-10|AAM22045.1|  102|Caenorhabditis elegans Hypothetical p...    62   4e-10
AF043699-4|AAB97568.1|  610|Caenorhabditis elegans Serotonin/oct...    28   6.4  
Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>U21324-10|AAM22045.1|  102|Caenorhabditis elegans Hypothetical
           protein C35D10.17 protein.
          Length = 102

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 28/59 (47%), Positives = 36/59 (61%)
 Frame = +2

Query: 137 MHTDLSPHLHTDECNIFIKKLVDCHLNHPFRKFIGYCNDYDRDMRKCLKAERLQRQKAN 313
           M  DLSPHLHT ECN+ I+ L  CH   P  K IG C+ +D  + +C K ER+ R+  N
Sbjct: 1   MLPDLSPHLHTKECNMLIEFLQRCHSEKPIGKMIGKCSYWDEAVWQCTKKERIWRRDNN 59


>AF043699-4|AAB97568.1|  610|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 3 protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
 Frame = +2

Query: 113 SIIKLI*VMHTDLSPHLHT---DECNIFIKKLVDCH-LNHPFRKF 235
           SI+  +  +++ L+P ++T    E  I  K+L+ CH LNHP +K+
Sbjct: 518 SIVFWLGYLNSALNPVIYTVFNREFRICFKRLLTCHHLNHPTQKY 562


>Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical
           protein F52B11.1a protein.
          Length = 508

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 263 DMRKCLKAERLQRQKANLDESRQRHANIRARILAQSA 373
           DMRKC  A+RL  +K      RQ   N++A I+A++A
Sbjct: 42  DMRKCFSAKRLYNEKV----KRQTDENLKA-IMAKTA 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,313,318
Number of Sequences: 27780
Number of extensions: 296491
Number of successful extensions: 655
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)