Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_E21
         (678 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025723-5|AAK29936.2|  183|Caenorhabditis elegans Hypothetical ...   116   1e-26
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr...    36   0.020
Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical p...    33   0.14 
Z81536-5|CAB04366.1|  297|Caenorhabditis elegans Hypothetical pr...    31   0.76 
AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine re...    30   1.7  
Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    28   7.0  
AF078157-18|AAG24080.1|  338|Caenorhabditis elegans Seven tm rec...    28   7.0  
U41559-10|AAC24264.2|  371|Caenorhabditis elegans Hypothetical p...    27   9.3  
U41108-2|AAQ23121.2|  639|Caenorhabditis elegans Tropomodulin pr...    27   9.3  
U41007-1|AAA82264.1|  326|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>AC025723-5|AAK29936.2|  183|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.5 protein.
          Length = 183

 Score =  116 bits (280), Expect = 1e-26
 Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
 Frame = +3

Query: 114 MVVTADVYLPEDSELTV-QEVNLSGSTLYAGSFHLGKYCETINNEYMLCRQEENDPRKCI 290
           M +T D + P D ELTV QE+ LS   L + + ++ K+CE   NE+ML R+E  DPR  +
Sbjct: 1   MSITKDTHFPSDEELTVPQEITLSTPWLKSIAPYMAKHCEKEANEFMLRRKEAEDPRAVL 60

Query: 291 NEGKAVTACTLEFFKKVKKTCLAEFNQYSNCLDKSSGDYAFRHCRKTQGVFDQCMLENLN 470
            EG A+TAC + F + +K++CL +  + + C+D+SS       C   Q   D C+  NLN
Sbjct: 61  KEGAALTACGVNFLQSLKRSCLPQTQKLAECVDQSSAKLYMSKCHDDQKELDACVEANLN 120

Query: 471 LPRPGFGYFCEARVHDTKRPKPLPEPKAVYPDATPALPE 587
           L RP  GYF +  V+D+    P  + +    +A   L E
Sbjct: 121 LTRPKLGYFSKLHVYDSATAAPEVKLRDYKAEAAKVLNE 159


>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
           protein H03E18.1 protein.
          Length = 1147

 Score = 36.3 bits (80), Expect = 0.020
 Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 11/163 (6%)
 Frame = +3

Query: 156 LTVQEVNLS---GSTLYAGSFHLGKYC-ETINNEYMLCRQEENDPRKCINEGKAVTACTL 323
           LT+Q+ + S   G     G+   G  C  TI + Y+L    E      +N+ + + A T 
Sbjct: 216 LTLQQNDASVAKGGKTGDGNKGKGPVCYRTIRHRYLLGADFEEHDVDSVNDCRCLCAATY 275

Query: 324 EFFKKVKKTCLAEFNQYSNCLDKSS--GDYAFRHCRKTQGVFDQC----MLENLNLPRPG 485
               K  K    +F   +  L+K +  G Y     RKT   +  C    +LE  +   P 
Sbjct: 276 LPNNKKNKCMSFQFRNKTCTLNKGNHLGQYDLIEQRKTLYQYVGCDPEILLETASSKCPN 335

Query: 486 FG-YFCEARVHDTKRPKPLPEPKAVYPDATPALPEDAEKKPPR 611
           F     E +  DTK+  P  +PK     A     E  E K P+
Sbjct: 336 FKPKSAEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPK 378


>Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical
           protein F40D4.7 protein.
          Length = 295

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +3

Query: 246 YMLCRQEENDPRKCINEGKAVTACTLEFFKKVK 344
           Y++C  + N P  C+N G A+ +C  ++F+ +K
Sbjct: 146 YVICNYQLNVPYNCVNVGCAMNSCFRQYFRPLK 178


>Z81536-5|CAB04366.1|  297|Caenorhabditis elegans Hypothetical
           protein F40D4.6 protein.
          Length = 297

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 246 YMLCRQEENDPRKCINEGKAVTACTLEFFKKVK 344
           Y++C  + N P  C+N G A+ +C  ++F   K
Sbjct: 149 YVICNYKLNIPYNCVNIGCAINSCYRQYFLSSK 181


>AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 23 protein.
          Length = 293

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 246 YMLCRQEENDPRKCINEGKAVTACTLEFFKKVK 344
           Y  C  E   PR C+  G ++ AC+  F+ K K
Sbjct: 146 YYFCNFELTFPRNCLTIGCSINACSSRFWTKSK 178


>Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +3

Query: 177 LSGSTLYAGSFHLGKYCETINNEYMLCRQEENDPRKCINEGKAVTACTLEFFKKVKKTCL 356
           ++GS L  GSF +G +C+ I   Y+L          C     ++ +   E+FKK + T +
Sbjct: 108 IAGSFLTGGSFVVGPFCKNI---YLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTVM 164

Query: 357 A 359
           A
Sbjct: 165 A 165


>Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +3

Query: 177 LSGSTLYAGSFHLGKYCETINNEYMLCRQEENDPRKCINEGKAVTACTLEFFKKVKKTCL 356
           ++GS L  GSF +G +C+ I   Y+L          C     ++ +   E+FKK + T +
Sbjct: 108 IAGSFLTGGSFVVGPFCKNI---YLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTVM 164

Query: 357 A 359
           A
Sbjct: 165 A 165


>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
           potassium channelsprotein 2 protein.
          Length = 1564

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +3

Query: 438 VFDQCMLENLNLPRPGFGYFCEARVHDTKRPKPLPEPKAVYPDATP-ALPEDAEKKPP 608
           +F QC +       P         VH++K P P  +P+    D  P A+  + EK+PP
Sbjct: 812 LFSQCSVSGKKYEPPEI---IPEEVHESKLPSPSFDPQTSESDEEPMAVFVEEEKRPP 866


>AF078157-18|AAG24080.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 28 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 305 RLTLVDTFSRIILFLTTQHIL-IVNGFTIFSQMKGTS 198
           R   V TFS  ++ L TQ+++ +V GF ++ +++G +
Sbjct: 195 RWNSVSTFSMFVVILLTQYVICLVCGFIMYRRIEGNA 231


>U41559-10|AAC24264.2|  371|Caenorhabditis elegans Hypothetical
           protein C26B2.4 protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 144 EDSELTVQEVNLSGSTLYAGSFHLGKYCETINNEYMLCRQEEN 272
           +D+E+ V E  +  + +Y    +L KYCE    E  +CR+EEN
Sbjct: 108 KDTEMGVAEA-MEMAQVY---MNLEKYCENNYCESNMCREEEN 146


>U41108-2|AAQ23121.2|  639|Caenorhabditis elegans Tropomodulin
           protein 2, isoform b protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 528 PKPLPEPKAVYPDATPALPEDAEKKPPR 611
           PK  PEPK + P   PA+P+      P+
Sbjct: 273 PKKEPEPKKMAPKIPPAVPKSLVSPEPK 300


>U41007-1|AAA82264.1|  326|Caenorhabditis elegans Hypothetical
           protein C33H5.7 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 320 CTGSDRLTLVDTFSRIILFLTTQH 249
           CT S +L LVD F+ +I F   +H
Sbjct: 218 CTNSSQLLLVDAFTGLIKFTLEEH 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,831,513
Number of Sequences: 27780
Number of extensions: 308020
Number of successful extensions: 983
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)