Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_E21
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.88 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.88 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   4.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.7  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   8.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 133 SIYPKIQS*PSKRSIYLDPLYMLVPFIWEN 222
           S+Y  + + P  + I L PLY + P+ + N
Sbjct: 143 SLYTAVITRPDTKFIQLPPLYEMCPYFFFN 172


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 133 SIYPKIQS*PSKRSIYLDPLYMLVPFIWEN 222
           S+Y  + + P  + I L PLY + P+ + N
Sbjct: 143 SLYTAVITRPDTKFIQLPPLYEMCPYFFFN 172


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 576 LAWRPGRQPSAPVEASVSWYRGLE 505
           ++W P  QP  P++    W   LE
Sbjct: 431 ISWNPLMQPKQPIKLFEQWKSILE 454


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 507 RVHDTKRPKPLPEPKAVYP 563
           +VH TK PKP  + K   P
Sbjct: 244 KVHATKPPKPQTKTKPTSP 262


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +3

Query: 321 LEFFKKVKKTCLAEFNQYSNCLDKSSGDYAFRHCRKTQGVFDQ 449
           ++F  +V + C   FN     + +    YA  H +  Q  F+Q
Sbjct: 523 IDFKIEVTEDCNKSFNDLLTQVAELDQIYADTHAKLVQAAFEQ 565


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/59 (18%), Positives = 23/59 (38%)
 Frame = +3

Query: 216 GKYCETINNEYMLCRQEENDPRKCINEGKAVTACTLEFFKKVKKTCLAEFNQYSNCLDK 392
           G + E +  E      +EN+  K I E  A++   +         C A++      +++
Sbjct: 77  GNFNEVVVREIAEIYLDENEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIMNE 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,009
Number of Sequences: 438
Number of extensions: 4140
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)