Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_E20
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 226 2e-60
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 178 7e-46
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 177 2e-45
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 169 3e-43
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 120 3e-28
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 118 8e-28
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 106 3e-24
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 75 8e-15
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 55 1e-08
SPAC3H8.06 |aur1||inositol phosphorylceramide synthase |Schizosa... 29 0.65
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 26 6.1
SPCC320.11c ||SPCC330.18|RNA-binding protein|Schizosaccharomyces... 25 8.0
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 226 bits (553), Expect = 2e-60
Identities = 101/169 (59%), Positives = 129/169 (76%), Gaps = 1/169 (0%)
Frame = +1
Query: 190 PVVFFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRR-DGVPLGYKGATFHRVI 366
PVVF DI + +GR+ LF+ +VPKT+ENFR+FCTGE + P+GYK +TFHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 367 KDFMIQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQFFITC 546
+ FMIQGGDFV+GDGTG +I+ TF DENF LKHD PGLLSMAN+GKD+NGCQFFIT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 547 AKCNFLDNKHVVFGRVIDGLLVMRKIENVPTGPNNKPKIPVTISQCGQM 693
C+FLD KHVVFG VI+G ++++IE+ P G N++PK V I +CG+M
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 178 bits (433), Expect = 7e-46
Identities = 90/163 (55%), Positives = 110/163 (67%)
Frame = +1
Query: 199 FFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFM 378
+F I++ + FELF +VVPKT +NF C G + +DG L YKG+ FHRVIK+FM
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNG-FEKDGRCLTYKGSRFHRVIKNFM 64
Query: 379 IQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQFFITCAKCN 558
+QGGDF G+GTG SIYG F DENF LKHD P LLSMAN+G +TNG QFFIT
Sbjct: 65 LQGGDFTRGNGTGGESIYG-EKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTP 123
Query: 559 FLDNKHVVFGRVIDGLLVMRKIENVPTGPNNKPKIPVTISQCG 687
LD KHVVFG+VI G +R IEN+ T N+ P +PV I +CG
Sbjct: 124 HLDGKHVVFGKVIQGKSTVRTIENLET-KNDDPVVPVVIEECG 165
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 177 bits (430), Expect = 2e-45
Identities = 86/163 (52%), Positives = 111/163 (68%)
Frame = +1
Query: 199 FFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFM 378
FFD+ +GR++F+LF DVVPKT+ NFR CTGE GY G+TFHRVI FM
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKG-----YGYAGSTFHRVIPQFM 59
Query: 379 IQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQFFITCAKCN 558
+QGGDF G+GTG SIYG F DENF LKH+ PGLLSMAN+G +TNG QFFIT
Sbjct: 60 LQGGDFTRGNGTGGKSIYG-EKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTP 118
Query: 559 FLDNKHVVFGRVIDGLLVMRKIENVPTGPNNKPKIPVTISQCG 687
+LD KHVVFG V +G+ V++K+E++ + + + + I +CG
Sbjct: 119 WLDGKHVVFGEVTEGMDVVKKVESLGSN-SGATRARIVIDKCG 160
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 169 bits (412), Expect = 3e-43
Identities = 87/166 (52%), Positives = 105/166 (63%)
Frame = +1
Query: 196 VFFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDF 375
V+FD+ G +GR+ LF VPKT+ENFR TGE GY+G+ FHRVI +F
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKG-----FGYEGSIFHRVIPNF 83
Query: 376 MIQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQFFITCAKC 555
MIQGGD GDGTG SIYG S F DENF L H PGLLSMAN+G D+NG QFFIT K
Sbjct: 84 MIQGGDITKGDGTGGKSIYG-SRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKT 142
Query: 556 NFLDNKHVVFGRVIDGLLVMRKIENVPTGPNNKPKIPVTISQCGQM 693
+LD HVVFG V+ G +++KI T +KP V I + GQ+
Sbjct: 143 PWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQL 188
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 120 bits (288), Expect = 3e-28
Identities = 68/152 (44%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Frame = +1
Query: 223 TEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFMIQGGDFVN 402
T G + EL D P NF + Y Y+ FHR I FMIQGGD +
Sbjct: 282 TNHGEINIELHTDYAPHAVYNFVQLAKQGY--------YRNTIFHRNIARFMIQGGD-PS 332
Query: 403 GDGTGVMSIYGGSTFADENFG-LKHDSPGLLSMANSGKDTNGCQFFITCAKCNFLDNKHV 579
G G G SI+G F DE LKHD G++SMAN GK+TNG QFFI LDNKH
Sbjct: 333 GTGRGGQSIWG-KPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHT 391
Query: 580 VFGRVIDGLLVMRKIENVPTGPNNKPKIPVTI 675
+FGRV+ GL V+ +E VPT N+ PK+P+ +
Sbjct: 392 IFGRVVGGLNVLDALEKVPTNSNDHPKLPIKL 423
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 118 bits (284), Expect = 8e-28
Identities = 66/152 (43%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Frame = +1
Query: 223 TEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFMIQGGDFVN 402
T +G+++ EL+ + PKT +NF Y Y G FHRVI DF+IQGGD
Sbjct: 8 TSLGKILIELYTEHAPKTCQNFYTLAKEGY--------YDGVIFHRVIPDFVIQGGD-PT 58
Query: 403 GDGTGVMSIYGGSTFADE-NFGLKHDSPGLLSMANSGKDTNGCQFFITCAKCNFLDNKHV 579
G G G SIYG F DE + L H G+LSMAN+G +TN QFFIT A +LD KH
Sbjct: 59 GTGRGGTSIYGDK-FDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHT 117
Query: 580 VFGRVIDGLLVMRKIENVPTGPNNKPKIPVTI 675
+FGRV+ GL V +++ + T +++P P+ I
Sbjct: 118 IFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKI 149
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 106 bits (255), Expect = 3e-24
Identities = 67/168 (39%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Frame = +1
Query: 175 RXPNNPVVFFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATF 354
R N ++ + T G + +L+ + PK +NF Y Y F
Sbjct: 445 RQENGNILLGKAAIIHTTQGDISIKLYPEEAPKAVQNFTTHAENGY--------YDNTIF 496
Query: 355 HRVIKDFMIQGGDFVNGDGTGVMSIYGGSTFADE-NFGLKHDSPGLLSMANSGKDTNGCQ 531
HR+IK+FMIQGGD + GDGTG SI+ F DE + LKHD P +SMANSG +TNG Q
Sbjct: 497 HRIIKNFMIQGGDPL-GDGTGGESIWK-KDFEDEISPNLKHDRPFTVSMANSGPNTNGSQ 554
Query: 532 FFITCAKCNFLDNKHVVFGRVIDGLLVMRKIENVPTGPNNKPKIPVTI 675
FFIT +LD KH +F R GL V+ +IE T ++P P I
Sbjct: 555 FFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETDKYDRPLEPTKI 602
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 75.4 bits (177), Expect = 8e-15
Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Frame = +1
Query: 190 PVVFFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIK 369
P+ + + TT G + EL+ VPK NF + C Y Y G HRV+
Sbjct: 9 PLATGTVILKTTR-GDIQIELWCKEVPKACRNFIQLCLEGY--------YDGTIVHRVVP 59
Query: 370 DFMIQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQFFITCA 549
+F+IQGGD G G G SIYG + + L+ GL+ MA + + N QFFIT
Sbjct: 60 EFLIQGGD-PTGTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLG 118
Query: 550 KCNFLDNKHVVFGRVI-DGLLVMRKIENVPTGPNNKPKIPVTI 675
+ K +FGRV+ D + + +I + N +P P I
Sbjct: 119 PTPEWNGKQTLFGRVVGDTIYNVVRISELELDANQRPVFPPKI 161
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 54.8 bits (126), Expect = 1e-08
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Frame = +1
Query: 223 TEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFMIQGGDFVN 402
T +G ++ +LF PKT ENF + C +Y Y F+ + ++ Q GD +
Sbjct: 7 TTVGDLVIDLFVKEAPKTCENFLKLCKLKY--------YNFCPFYNIQHNYTCQTGDPLG 58
Query: 403 GDGTGVMSIYG----GSTF--ADENFGLKHDSPGLLSMAN---SGKDTN----GCQFFIT 543
G G ++ G+ F A+ N L H+ GL+SM+ S +D G QF IT
Sbjct: 59 PTGDGGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIIT 118
Query: 544 CA-KCNFLDNKHVVFGRVIDGLLVMRKIENVPTGPNNKP 657
+ LD ++ ++G+V +G + KI + +P
Sbjct: 119 LSDNLEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQP 157
>SPAC3H8.06 |aur1||inositol phosphorylceramide synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 422
Score = 29.1 bits (62), Expect = 0.65
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -2
Query: 678 RYCYWYFRFIIWSCWYIFYFPH 613
RY + ++ +++W CW Y H
Sbjct: 272 RYRFCFYGYVLWLCWCTMYLTH 293
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -3
Query: 296 NSLKFSLV-FGTTSANNSNIIRPISVVPTVMS-KNTT 192
NS K S++ G +N+SNII+P + T++S +N T
Sbjct: 479 NSYKNSVLSIGNNHSNHSNIIKPNTYKNTILSNENNT 515
>SPCC320.11c ||SPCC330.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 180
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 705 KFYLHLSTLRYCYWYFRFIIW 643
KF LH++ L Y Y R+ IW
Sbjct: 78 KFRLHITALDYIAQYARYKIW 98
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,854,886
Number of Sequences: 5004
Number of extensions: 60146
Number of successful extensions: 174
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -