Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_E17
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002748-1|AAH02748.2| 260|Homo sapiens transmembrane protein 7... 111 3e-24
AK000540-1|BAA91240.1| 161|Homo sapiens protein ( Homo sapiens ... 103 6e-22
AL606833-1|CAI41228.1| 402|Homo sapiens ring finger protein 128... 32 2.8
AL391315-2|CAI39546.1| 402|Homo sapiens ring finger protein 128... 32 2.8
AK126553-1|BAC86589.1| 402|Homo sapiens protein ( Homo sapiens ... 32 2.8
BC113617-1|AAI13618.1| 757|Homo sapiens relaxin/insulin-like fa... 31 3.7
BC112142-1|AAI12143.1| 757|Homo sapiens leucine-rich repeat-con... 31 3.7
AY899850-1|AAX85198.1| 724|Homo sapiens LGR7.10 protein. 31 3.7
AY899849-1|AAX85197.1| 709|Homo sapiens LGR7.2 protein. 31 3.7
AF190500-1|AAG17167.1| 757|Homo sapiens leucine-rich repeat-con... 31 3.7
AB208943-1|BAD92180.1| 627|Homo sapiens leucine-rich repeat-con... 31 3.7
>BC002748-1|AAH02748.2| 260|Homo sapiens transmembrane protein 70
protein.
Length = 260
Score = 111 bits (267), Expect = 3e-24
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Frame = +1
Query: 253 IYYGTLTPQIKAIKIFSLCTSIAGIAIQPMLIREASSIGSTSLL---VAICSVVGFFTFV 423
IY G + + +K FS TS+ G+ P + + ++I + L + ++G FT +
Sbjct: 95 IYTGNMARAVFGVKCFSYSTSLIGLTFLPYIFTQNNAISESVPLPIQIIFYGIMGSFTVI 154
Query: 424 TPILLHFITKKYVTEIYYNAETSTYKAITINFFATKRIHEFKVEDVFVPDVPGMFTTMHA 603
TP+LLHFITK YV +Y+ A T TYKAIT N + F DV +PD +FTT +A
Sbjct: 155 TPVLLHFITKGYVIRLYHEATTDTYKAITYNAMLAETSTVFHQNDVKIPDAKHVFTTFYA 214
Query: 604 NGKPLFIEARFFNNPLHYAKIMGYDK-PMDFKLGETQESKNQK 729
K L + F N Y +MGYDK + ET E K K
Sbjct: 215 KTKSLLVNPVLFPNREDYIHLMGYDKEEFILYMEETSEEKRHK 257
>AK000540-1|BAA91240.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ20533 fis, clone KAT10931. ).
Length = 161
Score = 103 bits (248), Expect = 6e-22
Identities = 56/151 (37%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Frame = +1
Query: 289 IKIFSLCTSIAGIAIQPMLIREASSIGSTSLL---VAICSVVGFFTFVTPILLHFITKKY 459
+K FS TS+ G+ P + + ++I + L + ++G FT +TP+LLHFITK Y
Sbjct: 8 VKCFSYSTSLIGLTFLPYIFTQNNAISESVPLPIQIIFYGIMGSFTVITPVLLHFITKGY 67
Query: 460 VTEIYYNAETSTYKAITINFFATKRIHEFKVEDVFVPDVPGMFTTMHANGKPLFIEARFF 639
V +Y+ A T TYKAIT N + F DV +PD +FTT +A K L + F
Sbjct: 68 VIRLYHEATTDTYKAITYNAMLAETSTVFHQNDVKIPDAKHVFTTFYAKTKSLLVNPVLF 127
Query: 640 NNPLHYAKIMGYDK-PMDFKLGETQESKNQK 729
N Y +MGYDK + E E K K
Sbjct: 128 PNREDYIHLMGYDKEEFILYMEEASEEKRHK 158
>AL606833-1|CAI41228.1| 402|Homo sapiens ring finger protein 128
protein.
Length = 402
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1
Query: 412 FTFVTPILLHFITKKYVTEIYYNAETSTYKAI 507
FTF+ I F YVT YYN ETS Y AI
Sbjct: 16 FTFLLKITASFSMSAYVTVTYYN-ETSNYTAI 46
>AL391315-2|CAI39546.1| 402|Homo sapiens ring finger protein 128
protein.
Length = 402
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1
Query: 412 FTFVTPILLHFITKKYVTEIYYNAETSTYKAI 507
FTF+ I F YVT YYN ETS Y AI
Sbjct: 16 FTFLLKITASFSMSAYVTVTYYN-ETSNYTAI 46
>AK126553-1|BAC86589.1| 402|Homo sapiens protein ( Homo sapiens
cDNA FLJ44589 fis, clone BEAST2000981, weakly similar
to Mus musculus ring finger protein 130 (Rnf130). ).
Length = 402
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1
Query: 412 FTFVTPILLHFITKKYVTEIYYNAETSTYKAI 507
FTF+ I F YVT YYN ETS Y AI
Sbjct: 16 FTFLLKITASFSMSAYVTVTYYN-ETSNYTAI 46
>BC113617-1|AAI13618.1| 757|Homo sapiens relaxin/insulin-like
family peptide receptor 1 protein.
Length = 757
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 307 IKRIFLWPLSEVLMFRNIFFLCL*VFLPS 221
I+R+F+W +S V F NIF +C+ ++ S
Sbjct: 407 IQRVFVWVVSAVTCFGNIFVICMRPYIRS 435
>BC112142-1|AAI12143.1| 757|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 protein.
Length = 757
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 307 IKRIFLWPLSEVLMFRNIFFLCL*VFLPS 221
I+R+F+W +S V F NIF +C+ ++ S
Sbjct: 407 IQRVFVWVVSAVTCFGNIFVICMRPYIRS 435
>AY899850-1|AAX85198.1| 724|Homo sapiens LGR7.10 protein.
Length = 724
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 307 IKRIFLWPLSEVLMFRNIFFLCL*VFLPS 221
I+R+F+W +S V F NIF +C+ ++ S
Sbjct: 374 IQRVFVWVVSAVTCFGNIFVICMRPYIRS 402
>AY899849-1|AAX85197.1| 709|Homo sapiens LGR7.2 protein.
Length = 709
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 307 IKRIFLWPLSEVLMFRNIFFLCL*VFLPS 221
I+R+F+W +S V F NIF +C+ ++ S
Sbjct: 359 IQRVFVWVVSAVTCFGNIFVICMRPYIRS 387
>AF190500-1|AAG17167.1| 757|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 protein.
Length = 757
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 307 IKRIFLWPLSEVLMFRNIFFLCL*VFLPS 221
I+R+F+W +S V F NIF +C+ ++ S
Sbjct: 407 IQRVFVWVVSAVTCFGNIFVICMRPYIRS 435
>AB208943-1|BAD92180.1| 627|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 variant
protein.
Length = 627
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 307 IKRIFLWPLSEVLMFRNIFFLCL*VFLPS 221
I+R+F+W +S V F NIF +C+ ++ S
Sbjct: 277 IQRVFVWVVSAVTCFGNIFVICMRPYIRS 305
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,660,242
Number of Sequences: 237096
Number of extensions: 2347856
Number of successful extensions: 3730
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3730
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -