Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_E17
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    26   0.36 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.4  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 26.2 bits (55), Expect = 0.36
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +1

Query: 208 YAIKLKEETPIGTEKIYYGTLTPQIKAIK--IFSLCTSIAGIAIQPMLIREASSIGSTSL 381
           Y +  +EE        Y  +  PQ ++ +  +++L T  AG+AI   L   A+  G+T +
Sbjct: 7   YLLGSEEEGNQLNRSFYSASYPPQNRSQEEDLWNLATDRAGLAILLFLFSVATVFGNTLV 66

Query: 382 LVAI 393
           ++A+
Sbjct: 67  ILAV 70


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 681 LIIAHDLCIVQWVIEESCFNEQRLAISMHSSEHSW 577
           L +   L    WV      NEQR  ++MH +  S+
Sbjct: 82  LYVCRVLHTTVWVAGAQRGNEQRCTVTMHGTVQSY 116


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 157 PSKSLKCTSTFNSITRKYAIKLKEETPIGTE 249
           P  +L C  TF+ +  ++ +  KE  P  T+
Sbjct: 101 PGNALSCKETFSLLYYEFDVATKEPPPWETD 131


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 475 YNAETSTYKAITINFFATK 531
           YNA  ST KAI   F  TK
Sbjct: 271 YNAAVSTTKAINQGFRTTK 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,217
Number of Sequences: 438
Number of extensions: 4899
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)