Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_E16
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.68 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.68 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    25   0.90 
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   6.4  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 446  NIREQVEEEAEGKADLQRQLSKANAEAQLWRSKYESEGVARSEELE-EAKRKLQARLAEA 622
            N  +++EE+   K D       ANA+      ++    + +      +A  K   +L + 
Sbjct: 1046 NAVQKIEEKKPEKKDKVLTFLGANAQDDEGGLEFSVNKLFKCMICTYKADNKENEQLRKI 1105

Query: 623  EETIESLNQKVVALEK 670
            +E++  LN+K+ +LEK
Sbjct: 1106 QESLRDLNRKIESLEK 1121


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 446  NIREQVEEEAEGKADLQRQLSKANAEAQLWRSKYESEGVARSEELE-EAKRKLQARLAEA 622
            N  +++EE+   K D       ANA+      ++    + +      +A  K   +L + 
Sbjct: 1046 NAVQKIEEKKPEKKDKVLTFLGANAQDDEGGLEFSVNKLFKCMICTYKADNKENEQLRKI 1105

Query: 623  EETIESLNQKVVALEK 670
            +E++  LN+K+ +LEK
Sbjct: 1106 QESLRDLNRKIESLEK 1121


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 446 NIREQVEEEAEGKADLQRQLSKANAEAQLWRSKYESE 556
           N+R+ +    + K D+ +QL      +  +RSKY+ E
Sbjct: 80  NVRKVLHHLIDNKPDMWKQLEAKYDPSGEYRSKYKDE 116


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 165 IFSWAAFSLDKWSRPARRSL 106
           I SW +F L++ + PAR +L
Sbjct: 83  IISWVSFWLNRNATPARVAL 102


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 661 SDNLLVEGFDCLLGFGE 611
           S+ L+   F+CLLG G+
Sbjct: 34  SERLMKSYFECLLGTGK 50


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 213  TKPTAPSTTWMPLRRSCPSRTPT 281
            T+PT  STT  P   + P++  T
Sbjct: 1063 TRPTTTSTTTRPTTTNWPTQGTT 1085


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 569 SEELEEAK-RKLQARLAEAEETIESLNQKVVALEKTKQRLATEVEDLQLEVDR 724
           +E ++EA   KL + ++         NQK+  L +   ++  +VEDL+   DR
Sbjct: 262 NEAIKEAYFPKLDSLVSSRAWPSRVANQKLRDLNREVDQIKQDVEDLKRWSDR 314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,468
Number of Sequences: 336
Number of extensions: 2325
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)