Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_E09
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z49067-3|CAA88852.3|  591|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z34799-8|CAA84319.3|  591|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z27079-2|CAA81589.1|  205|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical
           protein F37D6.2c protein.
          Length = 584

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +1

Query: 235 GFKSWSWT*HERCSHFHDCR*RREKNDETANQRKREDINHG 357
           GFKSW+   +   SH+H C  RR  ND    +RKRE +  G
Sbjct: 469 GFKSWNG--NRTASHYHKC--RRSIND---IERKREIVRLG 502


>Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical
           protein F37D6.2b protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +1

Query: 235 GFKSWSWT*HERCSHFHDCR*RREKNDETANQRKREDINHG 357
           GFKSW+   +   SH+H C  RR  ND    +RKRE +  G
Sbjct: 466 GFKSWNG--NRTASHYHKC--RRSIND---IERKREIVRLG 499


>Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical
           protein F37D6.2a protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +1

Query: 235 GFKSWSWT*HERCSHFHDCR*RREKNDETANQRKREDINHG 357
           GFKSW+   +   SH+H C  RR  ND    +RKRE +  G
Sbjct: 467 GFKSWNG--NRTASHYHKC--RRSIND---IERKREIVRLG 500


>Z49067-3|CAA88852.3|  591|Caenorhabditis elegans Hypothetical
           protein C44F1.1 protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 287 SWKWLHRSC-*VQDQLLKPCP 228
           +W+WLHR+C  +QD   K CP
Sbjct: 300 TWQWLHRACEMIQDVGHKLCP 320


>Z34799-8|CAA84319.3|  591|Caenorhabditis elegans Hypothetical
           protein C44F1.1 protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 287 SWKWLHRSC-*VQDQLLKPCP 228
           +W+WLHR+C  +QD   K CP
Sbjct: 300 TWQWLHRACEMIQDVGHKLCP 320


>Z27079-2|CAA81589.1|  205|Caenorhabditis elegans Hypothetical
           protein T05G5.2 protein.
          Length = 205

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 333 SLISSFVIFFPALSTIVEMAAPFMLGPRPTFEAMSWMFDMP 211
           SL+     F  +L+  V M  P +  P+PTF  M  + D P
Sbjct: 127 SLVDYRSTFASSLAPPVPMQMPSVFSPQPTFPYMKSLLDYP 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,177,005
Number of Sequences: 27780
Number of extensions: 238105
Number of successful extensions: 620
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)