Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_E04
(744 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 62 6e-10
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 54 1e-07
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 53 3e-07
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 52 4e-07
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 51 8e-07
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 49 3e-06
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 49 5e-06
07_01_0547 + 4052618-4052659,4055575-4055741,4055839-4056556,405... 31 0.97
05_01_0335 + 2652334-2652340,2652459-2652550,2652642-2653362,265... 30 2.2
03_05_0695 - 26851370-26851495,26852949-26853398 30 2.2
07_03_0536 - 19205515-19205686,19205807-19205931,19206428-192065... 29 5.2
07_01_0601 + 4464745-4465010,4465274-4466582 29 5.2
04_04_1647 + 35032328-35033803 29 5.2
03_05_0880 - 28450248-28450458,28451911-28452013,28452135-284522... 29 5.2
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 29 5.2
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 29 5.2
01_07_0255 - 42322111-42322308,42322658-42322750,42323127-423233... 29 5.2
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904... 28 9.0
07_03_0683 + 20671067-20671951,20672030-20672203 28 9.0
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 61.7 bits (143), Expect = 6e-10
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Frame = +2
Query: 353 ANVPADSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDP---PSIANSPGYSLIT 523
A A+ +YD+I+VGGG+AGC LA L VL++E G P P +A + G+
Sbjct: 47 AETAAEEAYDYIVVGGGTAGCPLAATLAGPGGGRVLVLERGGAPAEFPPLATAGGFVRTL 106
Query: 524 STLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAENG 703
+ P F+S+ + + R ++LGG++S+N+ FY R + + + E G
Sbjct: 107 AMADPAPESDAPAQTFASE----DGVPNVRARVLGGATSINAGFYSRAHPDWFRSHGEGG 162
Query: 704 NE-GWDWNTV 730
WD V
Sbjct: 163 EAMNWDMKLV 172
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +2
Query: 374 SYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSLITSTLLPNWGYF 553
+YD+IIVGGG+AGC LA L++ + VL++E G P Y + L N+
Sbjct: 49 AYDYIIVGGGTAGCPLAATLSQ--KYKVLLLERGGSP--------YGNRNISHLENFHIC 98
Query: 554 GVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGN 670
+D +S Q F S + + R K+LGG +S+N+ FY R +
Sbjct: 99 LADDSPNSPSQGFISTDGVINARAKVLGGGTSVNAGFYSRAD 140
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 52.8 bits (121), Expect = 3e-07
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Frame = +2
Query: 350 HA-NVPADSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSLITS 526
HA + P SSY++I++GGG+AGC LA L+E + VL++E G P AN T
Sbjct: 44 HAQDAPLVSSYNYIVIGGGTAGCPLAATLSEHSR--VLLLERGGLP--YANMSSEQHFTD 99
Query: 527 TLLPNWGYFGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGN 670
L + +S Q+F S + + R ++LGG S LN+ FY R +
Sbjct: 100 AL--------ADTSPASPAQRFISEDGVVNARARVLGGGSCLNAGFYTRAS 142
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 52.4 bits (120), Expect = 4e-07
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Frame = +2
Query: 362 PADSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSLITSTLLPN 541
P S YD+IIVGGG+AGC LA L++ + VL++E G P + TL
Sbjct: 44 PQVSYYDYIIVGGGTAGCPLAATLSQ--RFRVLLLERGGSPYDDERIGNMTRFADTL--- 98
Query: 542 WGYFGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGN 670
+ SS Q+F S + ++R ++LGG S +N+ FY R +
Sbjct: 99 -----SDTSPSSPAQRFVSEDGVINSRPRVLGGGSCINAGFYTRAS 139
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 51.2 bits (117), Expect = 8e-07
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 362 PADSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSLITSTLLPN 541
P + YD+II+GGG+AGC LA L+E + VL++E G P A + L
Sbjct: 38 PVMAYYDYIIIGGGTAGCPLAATLSE--RYRVLLLERGGSPYDDARVLNMAHFADVLADT 95
Query: 542 WGYFGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVR 664
G +S Q+F S + + R ++LGG S +N+ F+ R
Sbjct: 96 SG--------ASPSQRFVSEDGVINARPRVLGGGSCINAGFFTR 131
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Frame = +2
Query: 374 SYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDP---PSIANSPGYSLITSTLLPNW 544
+YD+I+VGGG+AGC LA L+ + VL++E G P +++ + + S + P
Sbjct: 50 TYDYIVVGGGTAGCPLAATLS--LKYKVLLLERGGSPYGNRNVSYMENFHIGLSNMAP-- 105
Query: 545 GYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVR--GNRADYDNWAEN-GNEGW 715
D S + + R ++LGG + +N+ FY R N W E+ NE +
Sbjct: 106 ------DSASQAFISTDGVINARARVLGGGTCINAGFYSRASSNFIQEVGWDEDLVNESF 159
Query: 716 DW 721
W
Sbjct: 160 PW 161
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 48.8 bits (111), Expect = 5e-06
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = +2
Query: 341 YPAHA-NVPADSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSL 517
+ HA + P S Y++I+VGGG+AGC LA L+E + VL++E G P N
Sbjct: 44 FARHARDAPLVSYYNYIVVGGGTAGCPLAATLSERSR--VLLLERGGLPYGNRNVSSEYH 101
Query: 518 ITSTLLPNWGYFGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGN 670
L + S Q+F S + + R ++LGG S LN+ FY R +
Sbjct: 102 FADAL--------ADTSPRSPAQRFVSEDGVVNARARVLGGGSCLNAGFYTRAS 147
>07_01_0547 +
4052618-4052659,4055575-4055741,4055839-4056556,
4056678-4057114,4057241-4057315,4057490-4057673,
4057759-4057854,4057952-4058018,4058556-4058715,
4058808-4059199,4059254-4059300
Length = 794
Score = 31.1 bits (67), Expect = 0.97
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 385 HNRGRRISRLRTS*QTHRSRQLVCADDRSWRRPSKHS**SRLFAYNFDLT 534
H+ ++ S+L S S VCAD+ +PSK S RLFA LT
Sbjct: 59 HDNAQKESKLSKSSFAEFSESEVCADESDKNKPSKSSNAVRLFACTSTLT 108
>05_01_0335 +
2652334-2652340,2652459-2652550,2652642-2653362,
2653456-2653533,2653658-2653684,2653871-2653938,
2654089-2654174,2654251-2654333,2654478-2654620,
2654709-2654810,2654906-2655199,2655282-2655404,
2655733-2656119
Length = 736
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +2
Query: 563 DDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAENGNEGWDWNTV 730
+D ++ + K ++ +GK+ G ++S+F G D+ +++ + +DWNTV
Sbjct: 97 EDLETERRLAKKLKVKKGKLGGPDDGMDSLFADLGFEGDFG--SDDEAKEFDWNTV 150
>03_05_0695 - 26851370-26851495,26852949-26853398
Length = 191
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 248 ALFQVKILIPILEVIQLLI-IALSSFEIGEPLYPAHANVPADSSYDFIIVGGGSAGCVLA 424
AL + L+P E+++ + A +S G+ A A+ P D I GGG L
Sbjct: 86 ALRGSRYLLPAQELLREAVSAAAASARGGDDDDEAVASFPHDGKSTGIGGGGGGVQAKLL 145
Query: 425 NRLTEVANWSV 457
+ L+E++NW +
Sbjct: 146 SLLSEISNWFI 156
>07_03_0536 -
19205515-19205686,19205807-19205931,19206428-19206554,
19206653-19206777,19207616-19207708,19207779-19208052,
19208138-19208269,19208391-19208470,19209049-19209117,
19209227-19209343,19209416-19209484,19209839-19209892,
19210012-19210049,19211243-19211354,19211497-19211619,
19211728-19211755,19212048-19212104,19212984-19213028,
19213340-19213361,19213817-19213844,19214338-19214418
Length = 656
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 501 LLAMLGGSSPASIISTDQLATSVSLLASTQPADPP 397
+L LG S +S+ S + ATSV S P++PP
Sbjct: 594 MLHRLGSSKESSLQSLQETATSVFAKKSEPPSEPP 628
>07_01_0601 + 4464745-4465010,4465274-4466582
Length = 524
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 483 GSSPASIISTDQLATSVSLLASTQPADPPP 394
G P +ISTD L + +A+T P PPP
Sbjct: 168 GQCPQEVISTD-LCLGLGPIAATAPLQPPP 196
>04_04_1647 + 35032328-35033803
Length = 491
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 275 PILEVIQLLIIALSSFEIGEPLYPAHANVPADSSY 379
P++ ++QLL++ L S I PLY VPAD+ +
Sbjct: 6 PLVVLLQLLLLPLLSTAITLPLYRNLPPVPADTDH 40
>03_05_0880 -
28450248-28450458,28451911-28452013,28452135-28452280,
28452629-28452801,28453267-28453539
Length = 301
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 695 ENGNEGWDWNTVIXYF 742
ENG+E W W TV+ Y+
Sbjct: 281 ENGSEKWIWKTVVLYY 296
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
Frame = +2
Query: 365 ADSSYDFIIVGGGSAGCVL-------ANRLTEVANWSVLMIEAGDDP 484
+D YD + G G A + A L+ NW +++ G+DP
Sbjct: 215 SDGFYDLYVTGNGPASITMPSLKDLRAQSLSHRVNWEAVLVHRGEDP 261
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 501 LLAMLGGSSPASIISTDQLATSVSLLASTQPADPPPTI 388
L+ +LG S PA + S+ + S A+ QP P P +
Sbjct: 117 LMQLLGSSGPAHLDSSASMPPPASEFAAAQPPQPIPAM 154
>01_07_0255 -
42322111-42322308,42322658-42322750,42323127-42323344,
42323476-42323642,42324097-42324207,42324267-42324409,
42324492-42324710,42324975-42325055,42325202-42325381,
42325971-42326301,42326775-42326888,42327036-42327127,
42327631-42328059
Length = 791
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 368 DSSYDFIIVGGGSAGCVLA 424
+ YD I+VGGG AGC A
Sbjct: 102 EERYDVIVVGGGHAGCEAA 120
>10_08_0628 +
19389508-19389637,19389774-19389850,19390332-19390438,
19390545-19390626,19390702-19390814,19391023-19391086,
19391192-19391266,19391691-19391807,19392131-19392199,
19392319-19392411,19392733-19392835,19393040-19393164,
19393317-19393366,19393477-19393543,19393663-19393742,
19394038-19394166,19394274-19394340,19394429-19394512
Length = 543
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +2
Query: 374 SYDFIIVGGGSAGCVLANRLTEV-----ANWSVLMIEAGDD 481
SYD ++VG G AG A RL ++ + SV ++E G +
Sbjct: 2 SYDVVVVGAGPAGLAAAIRLKQLCRDADTDLSVCVLEKGSE 42
>07_03_0683 + 20671067-20671951,20672030-20672203
Length = 352
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 380 DFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDP 484
D ++VG GSAG A L++ + SV +IE P
Sbjct: 84 DVVVVGAGSAGLSCAYELSKDPSVSVAVIEQSVSP 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,628,329
Number of Sequences: 37544
Number of extensions: 377587
Number of successful extensions: 1050
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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