Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_D23
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 153 9e-38
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 90 1e-18
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 90 2e-18
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 84 8e-17
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 49 3e-06
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 49 3e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 48 9e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 44 1e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 44 1e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 44 1e-04
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 44 1e-04
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 44 1e-04
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 44 1e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 42 4e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 42 4e-04
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 42 4e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 42 4e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 42 4e-04
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 41 0.001
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 41 0.001
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 41 0.001
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 41 0.001
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 41 0.001
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 41 0.001
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 41 0.001
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 40 0.002
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 40 0.002
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 40 0.002
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 40 0.002
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 39 0.004
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 38 0.005
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 38 0.005
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.005
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.005
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 37 0.013
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 37 0.013
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 37 0.013
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 37 0.013
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 37 0.013
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.022
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.022
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.038
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 35 0.051
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 35 0.051
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 35 0.067
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 35 0.067
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 35 0.067
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 35 0.067
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 35 0.067
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 34 0.088
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 34 0.088
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 34 0.088
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 34 0.12
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 33 0.27
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 33 0.27
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 32 0.47
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 32 0.47
Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical pr... 31 0.82
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 30 1.4
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 30 1.4
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 30 1.4
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 30 1.4
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 2.5
U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 29 3.3
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 4.4
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 4.4
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41552-2|AAC69104.1| 640|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41552-1|AAC69101.2| 640|Caenorhabditis elegans Hypothetical pr... 28 7.7
AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA ... 28 7.7
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 153 bits (372), Expect = 9e-38
Identities = 72/126 (57%), Positives = 96/126 (76%), Gaps = 1/126 (0%)
Frame = +2
Query: 341 IKARVREMEEEAEKLKQMQTEVDKQMSMG-SPPGLTSPLNMSIEEKIEADNRSVYVGNVD 517
I+ + E+EEE +KLK +Q E+ M++ S +S ++ EEK EAD +SVYVGNVD
Sbjct: 27 IEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVD 86
Query: 518 YGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFXGR 697
YGATAEE+EQHFHGCGS++RVTI C+++ GHPKGFAY+EF +K+ +Q A+AM +SL GR
Sbjct: 87 YGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGR 146
Query: 698 QIKVMP 715
QIKV P
Sbjct: 147 QIKVDP 152
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 90.2 bits (214), Expect = 1e-18
Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
Frame = +2
Query: 359 EMEEEAEK--LKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATA 532
EME EAE L+Q+Q ++ K + + T EE+ D +SV++GNVD+ +T
Sbjct: 21 EMEIEAESAILEQIQNKMAKNLESAAYVPPTE------EEQKAIDAKSVFIGNVDFNSTI 74
Query: 533 EELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFXGRQIKV 709
EE+E+HF GCG I R TI +K+ K FAYIEF D S++ A+ M+ SLF R I V
Sbjct: 75 EEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVV 133
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 89.8 bits (213), Expect = 2e-18
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
Frame = +2
Query: 359 EMEEEAEK--LKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATA 532
EME EAE L+Q+Q ++ K + + T EE+ D +SV++GNVD+ +T
Sbjct: 15 EMEIEAESAILQQIQNKMAKHLESAAYVPPTE------EEQKAIDAKSVFIGNVDFNSTI 68
Query: 533 EELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFXGRQIKV 709
EE+E+HF GCG I + TI +K+ K FAYIEF D S++ A+ M+ SLF R I V
Sbjct: 69 EEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVV 127
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 84.2 bits (199), Expect = 8e-17
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +2
Query: 467 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDK 646
EE+ + D RSVYVGNVD+ +T E+E+HF CG + RVTI +K+ G+ K FA++EF
Sbjct: 38 EEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKL 97
Query: 647 DSVQTAMAMDESLFXGRQIKV 709
+SVQ A+ + ++F R+I V
Sbjct: 98 ESVQLALVLSGTMFRNRKIMV 118
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 670
SVYVGN + T EEL F G IN V I+C++ G P+GFA+IEF ++ S Q A+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 671 MDESLFXGRQIKV 709
M+ + F GR ++V
Sbjct: 66 MNGAEFNGRPLRV 78
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 670
SVYVGNV Y T EE+ +F G +N V I+ ++ G P+GFA++EF ++ Q A+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 671 MDESLFXGRQIKV 709
++ F GR ++V
Sbjct: 67 LNGVAFNGRNLRV 79
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAM 673
SVYVGN + T ++L +F G+++ V I+C++ G P+GFA++EF ++ + Q A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 674 DESL-FXGRQIKV 709
+ F GR ++V
Sbjct: 65 FNGVDFNGRALRV 77
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +2
Query: 485 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
+++ ++VG + E+L HF G + + + ++ +G +GFA++EF + + A
Sbjct: 27 EDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Query: 665 MAMDESLFXGRQIKVMP 715
+A E G+ ++V P
Sbjct: 87 LAAREQTIKGKSVEVKP 103
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 485 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
+N+ V+VG + + ++L HF G ++ + +K + FA+I F +++S A
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 665 MAMDESLFXGRQIKV 709
+ + F R+ V
Sbjct: 168 SSQTKQTFGTRECDV 182
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +2
Query: 485 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
+++ ++VG + E+L HF G + + + ++ +G +GFA++EF + + A
Sbjct: 27 EDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Query: 665 MAMDESLFXGRQIKVMP 715
+A E G+ ++V P
Sbjct: 87 LAAREQTIKGKSVEVKP 103
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 485 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
+N+ V+VG + + ++L HF G ++ + +K + FA+I F +++S A
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 665 MAMDESLFXGRQIKV 709
+ + F R+ V
Sbjct: 168 SSQTKQTFGTRECDV 182
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/98 (24%), Positives = 53/98 (54%)
Frame = +2
Query: 371 EAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQH 550
+AE ++ + + D+ ++ G+ + E R+++VG ++Y + +L +
Sbjct: 64 KAEAKEEKRRQKDELLAYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKLRRE 123
Query: 551 FHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
F G I ++T++ ++ G P+G+A+IE+ DK + TA
Sbjct: 124 FEAYGKIKKLTMVHDEA-GKPRGYAFIEYSDKAEMHTA 160
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +2
Query: 479 EADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ 658
+ RSV+VGN+ Y + + + F G++ + ++ ++ G PKG+ +IEF D + +
Sbjct: 14 DRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAE 73
Query: 659 TAM 667
A+
Sbjct: 74 VAI 76
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/93 (27%), Positives = 46/93 (49%)
Frame = +2
Query: 437 GLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPK 616
G+T+ ++ IE + + ++VY+ +V + +LE +F GSI V + + G +
Sbjct: 7 GVTTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHR 66
Query: 617 GFAYIEFGDKDSVQTAMAMDESLFXGRQIKVMP 715
GFA I F KD A+ + G ++ V P
Sbjct: 67 GFASITFDSKDGANKAIEQRPHVIDGDRVDVEP 99
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 461 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFG 640
++ EKI R +++ N+ Y ++L+ F G ++ V ++ +K G KGFA +EF
Sbjct: 270 TVREKILETGR-LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFV 328
Query: 641 DKDSVQTA-MAMDESLFXGRQIKVMP 715
++ A A+D +F GR + ++P
Sbjct: 329 FPEAAVAAYSALDGYVFKGRMMHILP 354
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +2
Query: 476 IEADNRSVYVGNVDYGATAEEL----EQHFHGCG---SINRVTILCNKYDGHPKGFAYIE 634
+ +R +YVGN+ +G E + Q H CG + +LC K FA+IE
Sbjct: 179 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQI--NLDKNFAFIE 236
Query: 635 FGDKDSVQTAMAMDESLFXGRQIKV 709
F D MA D F G+Q+KV
Sbjct: 237 FRSIDETTAGMAFDGINFMGQQLKV 261
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 482 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQ 658
++++ VYVGN+ +E+E FH G I V I G FA++EF D +D+
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAED 61
Query: 659 TAMAMDESLFXGRQIKV 709
A D F GR+I+V
Sbjct: 62 AVRARDGYEFDGRRIRV 78
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 482 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQ 658
++++ VYVGN+ +E+E FH G I V I G FA++EF D +D+
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAED 61
Query: 659 TAMAMDESLFXGRQIKV 709
A D F GR+I+V
Sbjct: 62 AVRARDGYEFDGRRIRV 78
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +2
Query: 476 IEADNRSVYVGNVDYGATAEEL----EQHFHGCG---SINRVTILCNKYDGHPKGFAYIE 634
+ +R +YVGN+ +G E + Q H CG + +LC K FA+IE
Sbjct: 179 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQI--NLDKNFAFIE 236
Query: 635 FGDKDSVQTAMAMDESLFXGRQIKV 709
F D MA D F G+Q+KV
Sbjct: 237 FRSIDETTAGMAFDGINFMGQQLKV 261
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +2
Query: 476 IEADNRSVYVGNVDYGATAEEL----EQHFHGCG---SINRVTILCNKYDGHPKGFAYIE 634
+ +R +YVGN+ +G E + Q H CG + +LC K FA+IE
Sbjct: 154 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQI--NLDKNFAFIE 211
Query: 635 FGDKDSVQTAMAMDESLFXGRQIKV 709
F D MA D F G+Q+KV
Sbjct: 212 FRSIDETTAGMAFDGINFMGQQLKV 236
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +2
Query: 476 IEADNRSVYVGNVDYGATAEEL----EQHFHGCG---SINRVTILCNKYDGHPKGFAYIE 634
+ +R +YVGN+ +G E + Q H CG + +LC K FA+IE
Sbjct: 157 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQI--NLDKNFAFIE 214
Query: 635 FGDKDSVQTAMAMDESLFXGRQIKV 709
F D MA D F G+Q+KV
Sbjct: 215 FRSIDETTAGMAFDGINFMGQQLKV 239
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM- 667
R++YVGN+D T + + F+ GS+ + ++ +DG +A++EF D A+
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI---FDGSNDPYAFVEFSDHGQASQALQ 102
Query: 668 AMDESLFXGRQIKV 709
M++ L R++KV
Sbjct: 103 TMNKRLLLDREMKV 116
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +2
Query: 464 IEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD 643
I + DN SVYVGN+ T +E+ Q F G I V I +G+A+++F +
Sbjct: 232 IYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDN 284
Query: 644 KDSVQTAMAMDESLFXGRQI 703
KD+ A+ + G Q+
Sbjct: 285 KDAAAKAIVQMNNQDVGGQL 304
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/68 (16%), Positives = 32/68 (47%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 676
V+VG++ ++L + F G ++ ++ + KG+ ++ + ++ + A+
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 677 ESLFXGRQ 700
+ GR+
Sbjct: 197 NGQWLGRR 204
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/104 (30%), Positives = 50/104 (48%)
Frame = +2
Query: 359 EMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEE 538
+++EEA+ K TE D+ M+MG P I+ +D + V N+ +E
Sbjct: 141 QLDEEADADKD--TEKDR-MAMGMRPD-----GRQIDRN-RSDENTCRVTNLPQEMNEDE 191
Query: 539 LEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 670
L F G + R+ I +K G PKGFA++ F +D A+A
Sbjct: 192 LRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQTAMAM 673
VYVG + AT++ELE+ F G I +V + P GFA++E+ D +D+ A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVA-----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 674 DESLFXGRQIKV 709
D S G + +V
Sbjct: 60 DGSRICGVRARV 71
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQTAMAM 673
VYVG + AT++ELE+ F G I +V + P GFA++E+ D +D+ A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVA-----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 674 DESLFXGRQIKV 709
D S G + +V
Sbjct: 60 DGSRICGVRARV 71
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQTAMAM 673
VYVG + AT++ELE+ F G I +V + P GFA++E+ D +D+ A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVA-----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 674 DESLFXGRQIKV 709
D S G + +V
Sbjct: 60 DGSRICGVRARV 71
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 670
S+ + N+ Y T +L + F G I V I +KY KGF ++ F ++ + A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 671 MDESLFXGRQIKV 709
D L GR+++V
Sbjct: 80 TDGKLVDGRELRV 92
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 670
S+ + N+ Y T +L + F G I V I +KY KGF ++ F ++ + A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 671 MDESLFXGRQIKV 709
D L GR+++V
Sbjct: 80 TDGKLVDGRELRV 92
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = +2
Query: 473 KIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 652
K+E R+VYVGN+ G E+ + F+ + + D P +AY+EF + S
Sbjct: 157 KVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQAS 216
Query: 653 VQTAMAMDESLFXGRQIKV 709
V A+ D F R +K+
Sbjct: 217 VCNALQNDGFEFKERPLKI 235
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = +2
Query: 473 KIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 652
K+E R+VYVGN+ G E+ + F+ + + D P +AY+EF + S
Sbjct: 157 KVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQAS 216
Query: 653 VQTAMAMDESLFXGRQIKV 709
V A+ D F R +K+
Sbjct: 217 VCNALQNDGFEFKERPLKI 235
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 670
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 671 MDESLFXGRQIKV 709
+ G + V
Sbjct: 174 QKSHMVNGHRCDV 186
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 455 NMSIEEKIEADN-RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYI 631
N S + +E +N R ++VG + T + + + + G I + ++ + +GF ++
Sbjct: 10 NGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFV 69
Query: 632 EFGDKDSVQTAMAMDESLFXGRQI 703
F K V AM + G+ +
Sbjct: 70 TFSGKTEVDAAMKQRPHIIDGKTV 93
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 670
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 671 MDESLFXGRQIKV 709
+ G + V
Sbjct: 136 QKSHMVNGHRCDV 148
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 670
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 671 MDESLFXGRQIKV 709
+ G + V
Sbjct: 136 QKSHMVNGHRCDV 148
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 670
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 671 MDESLFXGRQIKV 709
+ G + V
Sbjct: 174 QKSHMVNGHRCDV 186
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 455 NMSIEEKIEADN-RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYI 631
N S + +E +N R ++VG + T + + + + G I + ++ + +GF ++
Sbjct: 10 NGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFV 69
Query: 632 EFGDKDSVQTAMAMDESLFXGRQI 703
F K V AM + G+ +
Sbjct: 70 TFSGKTEVDAAMKQRPHIIDGKTV 93
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 670
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 671 MDESLFXGRQIKV 709
+ G + V
Sbjct: 174 QKSHMVNGHRCDV 186
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 455 NMSIEEKIEADN-RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYI 631
N S + +E +N R ++VG + T + + + + G I + ++ + +GF ++
Sbjct: 10 NGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFV 69
Query: 632 EFGDKDSVQTAMAMDESLFXGRQI 703
F K V AM + G+ +
Sbjct: 70 TFSGKTEVDAAMKQRPHIIDGKTV 93
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +2
Query: 485 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
D +++G + + TAE L +F G +N ++ + +GF +I F D SV
Sbjct: 43 DPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Query: 665 MAMDESLFXGRQI 703
+ E G++I
Sbjct: 103 LNNREHELDGKKI 115
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +2
Query: 467 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDK 646
+ K+ + V++G + +T E+++Q+F G + ++ +K +GF ++ F D
Sbjct: 126 QAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF-DS 184
Query: 647 DSV 655
D V
Sbjct: 185 DEV 187
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +2
Query: 485 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
D +++G + + TAE L +F G +N ++ + +GF +I F D SV
Sbjct: 43 DPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Query: 665 MAMDESLFXGRQI 703
+ E G++I
Sbjct: 103 LNNREHELDGKKI 115
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +2
Query: 467 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDK 646
+ K+ + V++G + +T E+++Q+F G + ++ +K +GF ++ F D
Sbjct: 126 QAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF-DS 184
Query: 647 DSV 655
D V
Sbjct: 185 DEV 187
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +2
Query: 464 IEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD 643
I + DN SVYVGN+ T +E+ Q F G I V I +G+A+++F +
Sbjct: 119 IYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDN 171
Query: 644 KDSVQTAMAMDESLFXGRQI 703
KD+ A+ + G Q+
Sbjct: 172 KDAAAKAIVQMNNQDVGGQL 191
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/68 (16%), Positives = 32/68 (47%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 676
V+VG++ ++L + F G ++ ++ + KG+ ++ + ++ + A+
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 677 ESLFXGRQ 700
+ GR+
Sbjct: 84 NGQWLGRR 91
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +2
Query: 464 IEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD 643
I + DN SVYVGN+ T +E+ Q F G I V I +G+A+++F +
Sbjct: 129 IYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDN 181
Query: 644 KDSVQTAMAMDESLFXGRQI 703
KD+ A+ + G Q+
Sbjct: 182 KDAAAKAIVQMNNQDVGGQL 201
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/68 (16%), Positives = 32/68 (47%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 676
V+VG++ ++L + F G ++ ++ + KG+ ++ + ++ + A+
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 677 ESLFXGRQ 700
+ GR+
Sbjct: 94 NGQWLGRR 101
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +2
Query: 464 IEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD 643
I + DN SVYVGN+ T +E+ Q F G I V I +G+A+++F +
Sbjct: 200 IYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDN 252
Query: 644 KDSVQTAMAMDESLFXGRQI 703
KD+ A+ + G Q+
Sbjct: 253 KDAAAKAIVQMNNQDVGGQL 272
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/68 (16%), Positives = 32/68 (47%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 676
V+VG++ ++L + F G ++ ++ + KG+ ++ + ++ + A+
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 677 ESLFXGRQ 700
+ GR+
Sbjct: 165 NGQWLGRR 172
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +2
Query: 485 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
D R+++V N+D+ T +E+ Q G SI R N H +GFAY+ + Q A
Sbjct: 591 DARTIFVSNLDFTTTEDEIRQAIEGVASI-RFARKANSDLVH-RGFAYVVMENDQKAQQA 648
Query: 665 MAMDESLFXGR 697
+ D GR
Sbjct: 649 LLKDRVPVKGR 659
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 491 RSVYVG--NVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
RS Y+ + + AT +++ + F G +I RV +C G P G AY+EF + + A
Sbjct: 62 RSQYIRLRGLPFNATEKDIHEFFAGL-TIERVKFVCTT--GRPNGEAYVEFKNTEEAGKA 118
Query: 665 MAMDESLFXGRQIKV 709
M D R I+V
Sbjct: 119 MENDRKEISNRYIEV 133
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-AM 673
+YVG++ + + L + F G I + + + GH K FA++E+ ++ A +M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 674 DESLFXGRQIKV 709
+ + GR +KV
Sbjct: 164 NGQMLGGRNLKV 175
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-AM 673
+YVG++ + + L + F G I + + + GH K FA++E+ ++ A +M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 674 DESLFXGRQIKV 709
+ + GR +KV
Sbjct: 164 NGQMLGGRNLKV 175
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-AM 673
+YVG++ + + L + F G I + + + GH K FA++E+ ++ A +M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 674 DESLFXGRQIKV 709
+ + GR +KV
Sbjct: 164 NGQMLGGRNLKV 175
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
++YVGN+ Y +++ + F G + RV + +++ P GF ++E+ ++ + A+
Sbjct: 38 TLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL 95
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSV-QTAMA 670
+V+V N E+L F G I ++ + G PKGF ++ F D+D+ Q
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDA-QGKPKGFGFVAFADQDAAGQAVEK 297
Query: 671 MDESLFXGRQIKV 709
+++S+ G K+
Sbjct: 298 LNDSILEGTDCKL 310
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAM 673
++YV N++ + L HF G+I ++ ++ +G KGF ++ F +K TA
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCF-EKPEEATAAVT 401
Query: 674 D 676
D
Sbjct: 402 D 402
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +2
Query: 449 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAY 628
P N+ S+Y+G++ + L + F G + + + + G+AY
Sbjct: 43 PTNIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAY 102
Query: 629 IEFGDKDSVQTAM-AMDESLFXGRQIKVM 712
+ F + A+ M+ + GR +++M
Sbjct: 103 VNFQQPADAERALDTMNFEVIHGRPMRIM 131
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +2
Query: 482 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQT 661
A N ++++ N+D + + F G+I + + +G+ KG+ ++ F + S QT
Sbjct: 142 AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD-EGNSKGYGFVHFETEHSAQT 200
Query: 662 AM 667
A+
Sbjct: 201 AI 202
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSV-QTAMA 670
+V+V N E+L F G I ++ + G PKGF ++ F D+D+ Q
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDA-QGKPKGFGFVAFADQDAAGQAVEK 297
Query: 671 MDESLFXGRQIKV 709
+++S+ G K+
Sbjct: 298 LNDSILEGTDCKL 310
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAM 673
++YV N++ + L HF G+I ++ ++ +G KGF ++ F +K TA
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCF-EKPEEATAAVT 401
Query: 674 D 676
D
Sbjct: 402 D 402
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +2
Query: 449 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAY 628
P N+ S+Y+G++ + L + F G + + + + G+AY
Sbjct: 43 PTNIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAY 102
Query: 629 IEFGDKDSVQTAM-AMDESLFXGRQIKVM 712
+ F + A+ M+ + GR +++M
Sbjct: 103 VNFQQPADAERALDTMNFEVIHGRPMRIM 131
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +2
Query: 482 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQT 661
A N ++++ N+D + + F G+I + + +G+ KG+ ++ F + S QT
Sbjct: 142 AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD-EGNSKGYGFVHFETEHSAQT 200
Query: 662 AM 667
A+
Sbjct: 201 AI 202
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 488 NRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 652
+R+V++G + TAEE+ Q F G + VTI ++ G+PKG A + F ++DS
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF-ERDS 371
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 488 NRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 652
+R+V++G + TAEE+ Q F G + VTI ++ G+PKG A + F ++DS
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF-ERDS 371
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 488 NRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 652
+R+V++G + TAEE+ Q F G + VTI ++ G+PKG A + F ++DS
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF-ERDS 157
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +2
Query: 488 NRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 652
+R+V++G + TAEE+ Q F G + VTI ++ G+PKG A + F ++DS
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF-ERDS 371
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +2
Query: 479 EADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ 658
+ D ++VG + ++L F G I TIL +KY G KG A++ + +DS
Sbjct: 25 DPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAV 84
Query: 659 TAMAM--DESLFXG--RQIKVMP 715
A D+ G R ++V P
Sbjct: 85 RCQATLHDQKTLPGMNRAMQVKP 107
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +2
Query: 473 KIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEF 637
K + D++ +++G + + +E+ F G ++ VT+L DG KG A++++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVL-RGADGASKGCAFVKY 171
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +2
Query: 479 EADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ 658
+ D ++VG + ++L F G I TIL +KY G KG A++ + +DS
Sbjct: 25 DPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAV 84
Query: 659 TAMAM--DESLFXG--RQIKVMP 715
A D+ G R ++V P
Sbjct: 85 RCQATLHDQKTLPGMNRAMQVKP 107
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +2
Query: 473 KIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEF 637
K + D++ +++G + + +E+ F G ++ VT+L DG KG A++++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVL-RGADGASKGCAFVKY 171
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 485 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
D+ +Y+G + Y + ++ F G + + ++ +K G KGFA++ + KD T
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCY--KDQRSTI 93
Query: 665 MAMD 676
+A+D
Sbjct: 94 LAVD 97
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 664
V + + +G +EL +F G++ R+ + N+ G+ KG+AY+ F +K + A
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIA 89
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 35.1 bits (77), Expect = 0.051
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +2
Query: 482 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQT 661
ADN SVYVGN+ +E+ + F G IN V +G+A+++F K+S
Sbjct: 253 ADNTSVYVGNI-ANLGEDEIRRAFDRFGPINEVRTF------KIQGYAFVKFETKESAAR 305
Query: 662 AMAMDESLFXGRQI 703
A+ + G QI
Sbjct: 306 AIVQMNNADIGGQI 319
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 34.7 bits (76), Expect = 0.067
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
++YV + T ELE F G I IL + G KG ++ F KD A+
Sbjct: 129 NLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAI 186
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 34.7 bits (76), Expect = 0.067
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFG-DKDSVQTAM 667
R++YVG T + L F G + ++I + G +GF ++EF +D+
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAID 70
Query: 668 AMDESLFXGRQIKV 709
M+ES G+ I+V
Sbjct: 71 NMNESELFGKTIRV 84
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
R +++G + + T E+L +F G + ++ + H +GF ++ F S ++AM
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 107
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 527 TAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 670
+ + L +F G++++V IL G P+G ++ + DK+S +A
Sbjct: 160 SVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLA 202
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
R +++G + + T E+L +F G + ++ + H +GF ++ F S ++AM
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 127
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 527 TAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 670
+ + L +F G++++V IL G P+G ++ + DK+S +A
Sbjct: 180 SVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLA 222
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +2
Query: 491 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
R +++G + + T E+L +F G + ++ + H +GF ++ F S ++AM
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 527 TAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 670
+ + L +F G++++V IL G P+G ++ + DK+S +A
Sbjct: 181 SVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLA 223
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 34.3 bits (75), Expect = 0.088
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 386 KQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCG 565
+Q Q V QM M PG +P S ++K D+ V+VGN+ + E + + + CG
Sbjct: 17 QQQQQIVFGQMRM---PGQHTPAQQSSQQK--PDSSPVFVGNISDKCSDEFIRKILNECG 71
Query: 566 SINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFXG-RQIKVMP 715
++ + +G +GF + F D + A+ + G +++ V P
Sbjct: 72 NVASWKRIKGS-NGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKP 121
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 34.3 bits (75), Expect = 0.088
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 386 KQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCG 565
+Q Q V QM M PG +P S ++K D+ V+VGN+ + E + + + CG
Sbjct: 17 QQQQQIVFGQMRM---PGQHTPAQQSSQQK--PDSSPVFVGNISDKCSDEFIRKILNECG 71
Query: 566 SINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFXG-RQIKVMP 715
++ + +G +GF + F D + A+ + G +++ V P
Sbjct: 72 NVASWKRIKGS-NGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKP 121
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 34.3 bits (75), Expect = 0.088
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 476 IEADNRSV--YVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKD 649
+E D++ V V VD+ T E +++F G++ I K DG+ KGF ++
Sbjct: 166 VERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVG 224
Query: 650 SVQTAMAMDESLFXGRQIKV 709
+A+ + + GR+ V
Sbjct: 225 EQNKVLAIPQHMIDGRRCDV 244
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 EADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKD-SV 655
+ADN SVYVGN+ T +L F G I V I + +A++ + K+ +
Sbjct: 233 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECAT 286
Query: 656 QTAMAMDESLFXGRQIK 706
+ M M+ G Q++
Sbjct: 287 KAIMEMNGKEMAGNQVR 303
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/68 (20%), Positives = 34/68 (50%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 676
V+VG++ + E L+ F G ++ ++ + KG+ ++ F +K + + A+A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 677 ESLFXGRQ 700
+ G++
Sbjct: 197 NGKWIGKR 204
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ 658
++VG T EL +HF ++ V ++ DG KG+ +I F +D +
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMV-KSLDGQSKGYGFITFETEDQAE 120
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ 658
++VG T EL +HF ++ V ++ DG KG+ +I F +D +
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMV-KSLDGQSKGYGFITFETEDQAE 121
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 341 IKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDY 520
+K R R EE+E+ + +V K + PPG+ S ++ + +E++ + N Y
Sbjct: 254 VKRRSRTSTEESEE--KTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGY 311
Query: 521 G 523
G
Sbjct: 312 G 312
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 341 IKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDY 520
+K R R EE+E+ + +V K + PPG+ S ++ + +E++ + N Y
Sbjct: 254 VKRRSRTSTEESEE--KTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGY 311
Query: 521 G 523
G
Sbjct: 312 G 312
>Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical
protein W06D12.1 protein.
Length = 327
Score = 31.1 bits (67), Expect = 0.82
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 374 AEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGA--TAEELEQ 547
+ K++ + D+++S PPG P N + +K + + N DY A +ELE
Sbjct: 148 SSKMQNLDVMTDRKVSDDIPPGFPRPQNNTKLQKSQKFSTDAMTSNSDYSADFLDDELED 207
Query: 548 HFHGCGSINRVTI 586
I VT+
Sbjct: 208 EVDKMSRIPSVTM 220
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
++YV N+D + L++ F G+I ++ ++ +G KGF ++ F + +A+
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAV 374
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
++YV N+D + L++ F G+I ++ ++ +G KGF ++ F + +A+
Sbjct: 258 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAV 314
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
++YV N+D + L++ F G+I ++ ++ +G KGF ++ F + +A+
Sbjct: 255 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAV 311
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
++YV N+D + L++ F G+I ++ ++ +G KGF ++ F + +A+
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAV 374
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
+Y+G + + +++E F G G I V + GF ++EF DK + A+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
+Y+G + + +++E F G G I V + GF ++EF DK + A+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 497 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 667
+Y+G + + +++E F G G I V + GF ++EF DK + A+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 467 EEKIEADNRSVYVGNVDYGATAEEL 541
+ K +NR VYVGN+ + AT +EL
Sbjct: 9 KRKRNVENRQVYVGNMPFDATEKEL 33
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +2
Query: 500 YVGNVDYGATAEELEQHFHGCGSINR------VTILCNKYDGHPKGFAYIEFGDKDSVQT 661
++G + Y + A ++E C + + ++ ++ G KGFAY+ F ++ + T
Sbjct: 9 FIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNT 68
Query: 662 AMA-MDESLFXGRQIKV 709
A++ ++ + F R +KV
Sbjct: 69 AISGLNGADFGNRVLKV 85
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 482 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ 658
++NR V++ N+ Y A +L+ G L +G PKG A +EF ++ +
Sbjct: 42 SNNRMVFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRNGKPKGNAVVEFETREGAE 100
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEF-GDKDSVQTAMA 670
++YVG +D + L + G + V + ++ + +GF ++EF G++D+
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 671 MDESLFXGRQIKV 709
++ G+ IKV
Sbjct: 74 LNMIKLYGKPIKV 86
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 494 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEF-GDKDSVQTAMA 670
++YVG +D + L + G + V + ++ + +GF ++EF G++D+
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 671 MDESLFXGRQIKV 709
++ G+ IKV
Sbjct: 84 LNMIKLYGKPIKV 96
>U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical
protein ZK402.5 protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 356 REMEEEAEKLKQ-MQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVG 508
RE+EE +++K+ + T VDK++ G+ ++I KI+A YVG
Sbjct: 401 RELEELKQQIKKSIGTNVDKKILFAELRGVFEAFLITINRKIKATACPCYVG 452
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 29.1 bits (62), Expect = 3.3
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Frame = +2
Query: 353 VREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLN-MSIEEKIEADNRSVYVGNVDYGAT 529
++E +A+K + + E ++ +G G + + + +K+ A VYV N+ T
Sbjct: 136 LQEKAAKAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHA----VYVSNLPEDIT 191
Query: 530 AEELEQHFHGCG----SINRVTILCNKY---DGHPKGFAYIEFGDKDSVQTAM-AMDESL 685
EE ++ CG I C Y +G KG + K+SV+ A +D +
Sbjct: 192 DEEFQKFMSKCGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYIKKESVELACNILDGAN 251
Query: 686 FXGRQIKV 709
GR++KV
Sbjct: 252 LNGREVKV 259
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 455 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIE 634
N + + ++ + V N+ T ++L F G IN+ ++ ++ G+ +GF +I
Sbjct: 64 NQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIY 123
Query: 635 F 637
F
Sbjct: 124 F 124
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 566 IHNHESAAPAPQPWLHNQHYQH 501
++N +S+A P P HN H+QH
Sbjct: 112 VNNGQSSATVPHPSHHNVHHQH 133
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 350 RVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSP 451
R+++ EE E L Q Q +V Q+ PP TSP
Sbjct: 171 RMKKYTEEMESLVQKQVDVLDQIMSSPPPPPTSP 204
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 350 RVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSP 451
R+++ EE E L Q Q +V Q+ PP TSP
Sbjct: 171 RMKKYTEEMESLVQKQVDVLDQIMSSPPPPPTSP 204
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -1
Query: 714 GITFICLPXNNDSSIAIAVWTLSLSPNSM*AKPFGWPSYLLHN--IVTL 574
G+T C + D++I I +W+L + S+ FGW + +L++ +VT+
Sbjct: 2 GVTACCCCSSKDAAITIGIWSLVYALASL--LLFGWQTGVLNHCRVVTM 48
>Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/88 (20%), Positives = 34/88 (38%)
Frame = +2
Query: 446 SPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFA 625
+P+ E + DN + + A+ + Q F G + LC +G G
Sbjct: 166 APILEDQEVGADGDNVVCRARGLPWQASDHHVAQFFAGLDIVPGGIALCLSSEGRRNGEV 225
Query: 626 YIEFGDKDSVQTAMAMDESLFXGRQIKV 709
++F ++S A+ + R I+V
Sbjct: 226 LVQFSSQESRDLALKRHRNFLLSRYIEV 253
>Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/88 (20%), Positives = 34/88 (38%)
Frame = +2
Query: 446 SPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFA 625
+P+ E + DN + + A+ + Q F G + LC +G G
Sbjct: 166 APILEDQEVGADGDNVVCRARGLPWQASDHHVAQFFAGLDIVPGGIALCLSSEGRRNGEV 225
Query: 626 YIEFGDKDSVQTAMAMDESLFXGRQIKV 709
++F ++S A+ + R I+V
Sbjct: 226 LVQFSSQESRDLALKRHRNFLLSRYIEV 253
>U41552-2|AAC69104.1| 640|Caenorhabditis elegans Hypothetical
protein K07E3.4a protein.
Length = 640
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 515 DYGATAEELEQHFH--GCGSINRVTILCNKYDGHPKGFAYI 631
+YGA + +H+ G G++ L N GHPK F ++
Sbjct: 480 EYGAFDAVVSEHWSQGGAGAVALANSLVNATTGHPKQFKFL 520
>U41552-1|AAC69101.2| 640|Caenorhabditis elegans Hypothetical
protein K07E3.4b protein.
Length = 640
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 515 DYGATAEELEQHFH--GCGSINRVTILCNKYDGHPKGFAYI 631
+YGA + +H+ G G++ L N GHPK F ++
Sbjct: 480 EYGAFDAVVSEHWSQGGAGAVALANSLVNATTGHPKQFKFL 520
>AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA
binding protein SYM-2 protein.
Length = 618
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/88 (20%), Positives = 34/88 (38%)
Frame = +2
Query: 446 SPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFA 625
+P+ E + DN + + A+ + Q F G + LC +G G
Sbjct: 166 APILEDQEVGADGDNVVCRARGLPWQASDHHVAQFFAGLDIVPGGIALCLSSEGRRNGEV 225
Query: 626 YIEFGDKDSVQTAMAMDESLFXGRQIKV 709
++F ++S A+ + R I+V
Sbjct: 226 LVQFSSQESRDLALKRHRNFLLSRYIEV 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,246,317
Number of Sequences: 27780
Number of extensions: 295628
Number of successful extensions: 1072
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -