Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_D21
         (856 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   1.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    24   1.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   4.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   7.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.4  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 649 LIVVNLSKAWPKQYPAITTPDMLNI*LPGNT 557
           L+ +NL      Q PA++TP++L++ L  N+
Sbjct: 447 LLHLNLDNVSLSQVPALSTPNLLSLSLAFNS 477


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = +3

Query: 375 TRPPLLK*TSKREQDKQKGRESILNKLLSAIPSLVETKQYIGV 503
           T PP+++   ++ +  +K R     + L A+      KQY+ +
Sbjct: 100 TGPPIVRCALRKHKPNRKPRTPFTTQQLLALEKKFRDKQYLSI 142


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 652 GLIVVNLSKAWPK 614
           G+I  NL+K+WP+
Sbjct: 275 GIIFFNLAKSWPQ 287


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 373 LSYIVILIRSINIVHLSETVATDYRKI 293
           L Y +      NIV+L+  + T Y KI
Sbjct: 76  LKYAIFQKNFTNIVNLTHLLETQYAKI 102


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -2

Query: 198 SDGDVSN--VSPKPFDHFKRPXNNKYITIQHMRTQ 100
           SD  + N  +  KP+  +K P N   + +  MR++
Sbjct: 407 SDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSE 441


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -2

Query: 198 SDGDVSN--VSPKPFDHFKRPXNNKYITIQHMRTQ 100
           SD  + N  +  KP+  +K P N   + +  MR++
Sbjct: 299 SDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSE 333


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 400 VYFKSGGLVLSYIVILIRSINIVHLSETVA 311
           V+F+    +  + +I IR+IN V    T+A
Sbjct: 55  VFFEKRSALSPFELIQIRTINFVATFRTIA 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,624
Number of Sequences: 336
Number of extensions: 4100
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)