Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_D20
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 279 1e-74
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 278 1e-74
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 278 1e-74
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 278 1e-74
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 278 1e-74
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 278 1e-74
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 276 5e-74
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 3e-41
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 126 6e-29
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 118 2e-26
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 279 bits (683), Expect = 1e-74
Identities = 125/196 (63%), Positives = 151/196 (77%)
Frame = +1
Query: 163 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 342
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 343 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 522
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 523 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDE 702
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDE 216
Query: 703 DSFKRQFXKYIKLGVT 750
D++K+QF +YIK VT
Sbjct: 217 DAYKKQFSQYIKNSVT 232
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 120 RREGKTDYYARKRL 161
RREGKTDYYARKRL
Sbjct: 23 RREGKTDYYARKRL 36
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 278 bits (682), Expect = 1e-74
Identities = 125/196 (63%), Positives = 151/196 (77%)
Frame = +1
Query: 163 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 342
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 343 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 522
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 523 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDE 702
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 703 DSFKRQFXKYIKLGVT 750
D++K+QF +YIK VT
Sbjct: 217 DAYKKQFSQYIKNSVT 232
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 120 RREGKTDYYARKRL 161
RREGKTDYYARKRL
Sbjct: 23 RREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 278 bits (682), Expect = 1e-74
Identities = 125/196 (63%), Positives = 151/196 (77%)
Frame = +1
Query: 163 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 342
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 343 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 522
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 523 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDE 702
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 703 DSFKRQFXKYIKLGVT 750
D++K+QF +YIK VT
Sbjct: 217 DAYKKQFSQYIKNSVT 232
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 120 RREGKTDYYARKRL 161
RREGKTDYYARKRL
Sbjct: 23 RREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 278 bits (682), Expect = 1e-74
Identities = 125/196 (63%), Positives = 151/196 (77%)
Frame = +1
Query: 163 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 342
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 343 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 522
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 523 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDE 702
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 703 DSFKRQFXKYIKLGVT 750
D++K+QF +YIK VT
Sbjct: 217 DAYKKQFSQYIKNSVT 232
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 120 RREGKTDYYARKRL 161
RREGKTDYYARKRL
Sbjct: 23 RREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 278 bits (682), Expect = 1e-74
Identities = 125/196 (63%), Positives = 151/196 (77%)
Frame = +1
Query: 163 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 342
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 343 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 522
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 523 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDE 702
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 703 DSFKRQFXKYIKLGVT 750
D++K+QF +YIK VT
Sbjct: 217 DAYKKQFSQYIKNSVT 232
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 120 RREGKTDYYARKRL 161
RREGKTDYYARKRL
Sbjct: 23 RREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 278 bits (682), Expect = 1e-74
Identities = 125/196 (63%), Positives = 151/196 (77%)
Frame = +1
Query: 163 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 342
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 44 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 103
Query: 343 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 522
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 104 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 163
Query: 523 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDE 702
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DE
Sbjct: 164 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 223
Query: 703 DSFKRQFXKYIKLGVT 750
D++K+QF +YIK VT
Sbjct: 224 DAYKKQFSQYIKNSVT 239
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 120 RREGKTDYYARKRL 161
RREGKTDYYARKRL
Sbjct: 30 RREGKTDYYARKRL 43
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 276 bits (677), Expect = 5e-74
Identities = 124/196 (63%), Positives = 150/196 (76%)
Frame = +1
Query: 163 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 342
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYA 96
Query: 343 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 522
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 523 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDE 702
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDE 216
Query: 703 DSFKRQFXKYIKLGVT 750
D++K+QF +YIK VT
Sbjct: 217 DAYKKQFSQYIKNSVT 232
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 120 RREGKTDYYARKRL 161
RREGKTDYYARKRL
Sbjct: 23 RREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (407), Expect = 3e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +1
Query: 205 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 384
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 385 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 564
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 565 LNVPH 579
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 126 bits (305), Expect = 6e-29
Identities = 55/80 (68%), Positives = 69/80 (86%)
Frame = +1
Query: 511 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLE 690
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 691 QDDEDSFKRQFXKYIKLGVT 750
++DED++K+QF +YIK VT
Sbjct: 61 EEDEDAYKKQFSQYIKNSVT 80
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 118 bits (284), Expect = 2e-26
Identities = 49/62 (79%), Positives = 60/62 (96%)
Frame = +1
Query: 163 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 342
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 343 AA 348
AA
Sbjct: 97 AA 98
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 120 RREGKTDYYARKRL 161
RREGKTDYYARKRL
Sbjct: 23 RREGKTDYYARKRL 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,027,795
Number of Sequences: 237096
Number of extensions: 2152720
Number of successful extensions: 3726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3717
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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