Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_D18
(870 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic... 324 1e-87
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 304 2e-81
UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;... 223 3e-57
UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=... 200 5e-50
UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor... 197 3e-49
UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor... 190 4e-47
UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative; ... 181 2e-44
UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor... 166 6e-40
UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release fa... 151 2e-35
UniRef50_P58227 Cluster: Peptide chain release factor subunit 1;... 128 1e-28
UniRef50_A0RX46 Cluster: Peptide chain release factor 1; n=2; Cr... 116 1e-24
UniRef50_A7DMG3 Cluster: ERF1 domain 2 protein; n=1; Candidatus ... 115 1e-24
UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;... 111 2e-23
UniRef50_Q58239 Cluster: Peptide chain release factor subunit 1;... 104 3e-21
UniRef50_Q9HNF0 Cluster: Peptide chain release factor subunit 1;... 102 1e-20
UniRef50_Q74N59 Cluster: NEQ052; n=1; Nanoarchaeum equitans|Rep:... 97 7e-19
UniRef50_Q8TS00 Cluster: Peptide chain release factor subunit 1-... 95 2e-18
UniRef50_Q46FF0 Cluster: Peptide chain release factor, subunit 1... 93 1e-17
UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;... 85 2e-15
UniRef50_UPI000150A1F7 Cluster: eRF1 domain 1 family protein; n=... 84 4e-15
UniRef50_Q8ZU81 Cluster: Peptide chain release factor subunit 1;... 80 8e-14
UniRef50_Q3UUT4 Cluster: 16 days neonate thymus cDNA, RIKEN full... 37 0.58
UniRef50_Q97DK8 Cluster: Uncharacterized conserved protein, phnB... 35 3.1
UniRef50_A0CCA2 Cluster: Chromosome undetermined scaffold_167, w... 34 5.4
UniRef50_UPI00006CC094 Cluster: hypothetical protein TTHERM_0021... 33 9.4
>UniRef50_UPI0000DB724B Cluster: PREDICTED: similar to eukaryotic
release factor 1 CG5605-PA, isoform A; n=1; Apis
mellifera|Rep: PREDICTED: similar to eukaryotic release
factor 1 CG5605-PA, isoform A - Apis mellifera
Length = 265
Score = 324 bits (797), Expect = 1e-87
Identities = 156/158 (98%), Positives = 158/158 (100%)
Frame = +3
Query: 378 SEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNI 557
+EE+SADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNI
Sbjct: 3 NEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNI 62
Query: 558 KSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINT 737
KSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINT
Sbjct: 63 KSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINT 122
Query: 738 SLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGT 851
SLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGT
Sbjct: 123 SLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGT 160
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 304 bits (747), Expect = 2e-81
Identities = 145/157 (92%), Positives = 153/157 (97%)
Frame = +3
Query: 381 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 560
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 561 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 740
SRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64 SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTS 123
Query: 741 LYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGT 851
LYLCDNKFHTEALTALL+DD+KFGFIV+DG+GALFGT
Sbjct: 124 LYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGT 160
>UniRef50_Q8SRZ6 Cluster: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;
n=1; Encephalitozoon cuniculi|Rep: PEPTIDE CHAIN RELEASE
FACTOR SUBUNIT 1 - Encephalitozoon cuniculi
Length = 386
Score = 223 bits (546), Expect = 3e-57
Identities = 99/149 (66%), Positives = 127/149 (85%)
Frame = +3
Query: 405 VEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSV 584
VE+W++KKL+++L +RGNGTSMIS+IIPPKDQISRVSKML DE+GTASNIKSRVNRLSV
Sbjct: 5 VEMWRMKKLLRNLRDSRGNGTSMISIIIPPKDQISRVSKMLTDEYGTASNIKSRVNRLSV 64
Query: 585 LGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKF 764
LGAITS Q +LK Y+K PPNGL I+ GT++T++ KEKK+++ EP KP+NTSLY+CD+KF
Sbjct: 65 LGAITSAQSKLKQYSKTPPNGLGIFVGTVLTDQNKEKKISVGIEPIKPVNTSLYMCDSKF 124
Query: 765 HTEALTALLADDNKFGFIVMDGNGALFGT 851
H + L AL D+ ++GFIVMDG+ +F T
Sbjct: 125 HVDDLLALFEDEARYGFIVMDGHSTVFAT 153
>UniRef50_Q98RP4 Cluster: Eukaryotic release factor 1 homolog; n=1;
Guillardia theta|Rep: Eukaryotic release factor 1
homolog - Guillardia theta (Cryptomonas phi)
Length = 409
Score = 200 bits (487), Expect = 5e-50
Identities = 90/147 (61%), Positives = 111/147 (75%)
Frame = +3
Query: 408 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 587
E+WKIKK + L +GNGTSMISL+IP + IS+VSKML+DE TASNIKSR+NR SVL
Sbjct: 9 ELWKIKKTYQYLSTIKGNGTSMISLVIPSNEHISKVSKMLSDELATASNIKSRINRSSVL 68
Query: 588 GAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFH 767
AI+SVQ +LK YTK P NGL+IYCGT E KEKK+ I+ EP KP+N+S Y+CD+KFH
Sbjct: 69 SAISSVQQKLKYYTKTPNNGLIIYCGTFTDENNKEKKILIEIEPLKPLNSSFYICDSKFH 128
Query: 768 TEALTALLADDNKFGFIVMDGNGALFG 848
T L ++ D K FI++DG GALFG
Sbjct: 129 TNILLEMIQVDQKIAFIILDGKGALFG 155
>UniRef50_Q9NAX8 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=6; Trypanosomatidae|Rep: Eukaryotic peptide
chain release factor subunit 1 - Trypanosoma brucei
brucei
Length = 452
Score = 197 bits (480), Expect = 3e-49
Identities = 90/157 (57%), Positives = 120/157 (76%)
Frame = +3
Query: 381 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 560
E S +++ +E +K+KKLI+ LE ARG GTS+IS+ + PK+QIS + L +E+GTASNIK
Sbjct: 5 ELSESEKAIERYKVKKLIQMLESARGMGTSVISIYMTPKEQISGMVTKLNNEYGTASNIK 64
Query: 561 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 740
S N+LSV AIT+ RLK Y ++PPNGL++YCGT++T E KEKK+ +D EPFKP++ S
Sbjct: 65 SHTNKLSVQSAITASLGRLKQYNRLPPNGLLLYCGTVLTAENKEKKLTLDIEPFKPVSRS 124
Query: 741 LYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGT 851
LYLCDNKFHTE L +L D KFGFIV+DG+G + T
Sbjct: 125 LYLCDNKFHTEELHRMLESDEKFGFIVVDGSGTTYAT 161
>UniRef50_Q9NCP1 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=2; Giardia intestinalis|Rep: Eukaryotic
peptide chain release factor subunit 1 - Giardia lamblia
(Giardia intestinalis)
Length = 457
Score = 190 bits (463), Expect = 4e-47
Identities = 88/154 (57%), Positives = 116/154 (75%)
Frame = +3
Query: 396 DRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNR 575
+R + IW++K+ I+ LE G+GTS+ISL+IPP +Q+S V+ ML +E+GTASNIKSRVN+
Sbjct: 15 ERQIAIWQLKRTIEKLESYTGSGTSVISLLIPPGEQLSSVTGMLTNEYGTASNIKSRVNK 74
Query: 576 LSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 755
+VL AITS RLKLY ++PPNGL +YCG I E+GK KV ID+ P+KPI+ +YLCD
Sbjct: 75 NAVLSAITSAMSRLKLYNRLPPNGLAVYCGEI-EEDGKNTKVVIDYTPYKPISNFIYLCD 133
Query: 756 NKFHTEALTALLADDNKFGFIVMDGNGALFGTPS 857
+KFHTE L LL +D+ FGFI+MDG L T S
Sbjct: 134 SKFHTEHLRELLTNDDTFGFIIMDGKETLMATLS 167
>UniRef50_A2EPZ2 Cluster: Eukaryotic release factor 1, putative;
n=2; Trichomonas vaginalis|Rep: Eukaryotic release
factor 1, putative - Trichomonas vaginalis G3
Length = 438
Score = 181 bits (441), Expect = 2e-44
Identities = 82/148 (55%), Positives = 110/148 (74%)
Frame = +3
Query: 405 VEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSV 584
+E++KIK+LI L A G+GTSM++++IPP D + R+ + L DE GTASNIK+RVNR SV
Sbjct: 14 IELFKIKRLINYLRDAHGDGTSMVTILIPPGDAVHRMRQKLTDELGTASNIKNRVNRQSV 73
Query: 585 LGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKF 764
AIT+ +L + PPNGL ++CGTI+ EEGKEKK+ DFEPF+P++ SLY+CD +F
Sbjct: 74 EAAITAAIQKLGQFNSTPPNGLCVFCGTII-EEGKEKKLMKDFEPFRPLHQSLYICDRRF 132
Query: 765 HTEALTALLADDNKFGFIVMDGNGALFG 848
H E L LL + KFGFI+MDG G L+G
Sbjct: 133 HVEPLADLLQTNEKFGFIIMDGQGTLYG 160
>UniRef50_Q5CD84 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=5; Eukaryota|Rep: Eukaryotic peptide chain
release factor subunit 1 - Loxodes striatus
Length = 436
Score = 166 bits (404), Expect = 6e-40
Identities = 75/147 (51%), Positives = 109/147 (74%), Gaps = 1/147 (0%)
Frame = +3
Query: 414 WKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGA 593
WKI++LI+ LE A+GNGTS+ISLIIPPK+QIS +++ L D G A NIKS+ + +V A
Sbjct: 12 WKIRRLIEYLEKAKGNGTSLISLIIPPKEQISLINQKLTDAHGRAQNIKSKAVQKAVQDA 71
Query: 594 ITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGK-EKKVNIDFEPFKPINTSLYLCDNKFHT 770
I S + +L + ++PPNGL++YCG + E+ K EK++ EP + INT+ +LC+N F+T
Sbjct: 72 IISTKQKLSVIKQIPPNGLILYCGKFIGEDEKTEKQILEVLEPLRAINTTFFLCENTFYT 131
Query: 771 EALTALLADDNKFGFIVMDGNGALFGT 851
+ L +L + +KFGFI+MDGNG+LFGT
Sbjct: 132 QPLRDMLQEQDKFGFIIMDGNGSLFGT 158
>UniRef50_Q965E7 Cluster: Eukaryotic polypeptide chain release
factor 1; n=3; Paramecium tetraurelia|Rep: Eukaryotic
polypeptide chain release factor 1 - Paramecium
tetraurelia
Length = 437
Score = 151 bits (367), Expect = 2e-35
Identities = 73/156 (46%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Frame = +3
Query: 387 SSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSR 566
+ A+ +E +++KKLIK+L R GTS++S+ IPPK IS ++ L ++ A++IK +
Sbjct: 6 NDAEIALEQFRLKKLIKTLSQERTAGTSVVSVYIPPKRIISDITNRLNTQYAEAASIKDK 65
Query: 567 VNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGK-EKKVNIDFEPFKPINTSL 743
NR+SV AI + RL+ Y K P NGLV++CG + +GK EKK+++ EP++P++ SL
Sbjct: 66 GNRISVQEAIQAAILRLRPYNKAPNNGLVVFCGIVQQADGKGEKKISVVIEPYRPLDLSL 125
Query: 744 YLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGT 851
Y CD +FH E L ALL D FGFI+MDGNG+LF T
Sbjct: 126 YFCDPQFHVEELRALLNIDPPFGFIIMDGNGSLFAT 161
>UniRef50_P58227 Cluster: Peptide chain release factor subunit 1;
n=5; Thermoplasmatales|Rep: Peptide chain release factor
subunit 1 - Thermoplasma volcanium
Length = 418
Score = 128 bits (310), Expect = 1e-28
Identities = 65/151 (43%), Positives = 89/151 (58%)
Frame = +3
Query: 396 DRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNR 575
D + ++ K+ ++ L G GT +ISL IPP+ QIS V L DE+ T+SNIKS+ R
Sbjct: 7 DEQIRRYEFKRALEELSKLHGRGTELISLYIPPEKQISDVVAYLRDEYSTSSNIKSKSTR 66
Query: 576 LSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCD 755
+VL AI S+ RLK Y PPNGLV + G I T + + EP +PI T +Y CD
Sbjct: 67 KNVLAAIESIMSRLKYYRFPPPNGLVFFVGHIATRGDQTEMYTKIIEPPEPITTFMYKCD 126
Query: 756 NKFHTEALTALLADDNKFGFIVMDGNGALFG 848
++FHTE L A+L + +G IV+D A G
Sbjct: 127 SEFHTEMLKAMLDEKEIYGLIVIDRKEATVG 157
>UniRef50_A0RX46 Cluster: Peptide chain release factor 1; n=2;
Crenarchaeota|Rep: Peptide chain release factor 1 -
Cenarchaeum symbiosum
Length = 411
Score = 116 bits (278), Expect = 1e-24
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 4/150 (2%)
Frame = +3
Query: 411 IWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLG 590
++KI+K++ L G GT +IS+ IP Q+ + +L +E GTA NIKS + R V+
Sbjct: 1 MYKIRKMLDELSGISGRGTELISVYIPKGKQLHEIISVLKEEQGTADNIKSDLTRTHVVD 60
Query: 591 AITSVQHRLKLYTKVPPNGLVIYCGTIVTE----EGKEKKVNIDFEPFKPINTSLYLCDN 758
++ V RL+LY K P GLVI+CG + E G E + +P K + T LY CD+
Sbjct: 61 SLAKVVQRLRLYKKTPERGLVIFCGALPPEGGGPTGSETVRAFEIDPPKELRTFLYRCDD 120
Query: 759 KFHTEALTALLADDNKFGFIVMDGNGALFG 848
FH + L +L DDN GF+ +D A +G
Sbjct: 121 HFHVDILKGMLKDDNLIGFLAIDAKDAGWG 150
>UniRef50_A7DMG3 Cluster: ERF1 domain 2 protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: ERF1 domain 2 protein
- Candidatus Nitrosopumilus maritimus SCM1
Length = 426
Score = 115 bits (277), Expect = 1e-24
Identities = 59/153 (38%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Frame = +3
Query: 402 NVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLS 581
+V+++KI+K ++ L G GT +I++ IP Q+ + L E GTA NIKS + R
Sbjct: 11 SVKVYKIRKTLEELSKKSGRGTELITVYIPKGKQLHEIIGTLQQEQGTADNIKSDLTRSH 70
Query: 582 VLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEG---KEKKVNI-DFEPFKPINTSLYL 749
V+ ++ V RLKLY K P GLV++CG + EEG + V + + +P K +N LY
Sbjct: 71 VVDSLGKVVQRLKLYKKTPERGLVMFCGALPPEEGGPLGSEVVKVWEIDPPKDLNQYLYR 130
Query: 750 CDNKFHTEALTALLADDNKFGFIVMDGNGALFG 848
CD+ FH + L +L DDN GF+ +D A +G
Sbjct: 131 CDDHFHVDILKDMLKDDNLIGFLAIDSKDAGWG 163
>UniRef50_Q8U0J4 Cluster: Peptide chain release factor subunit 1;
n=5; Archaea|Rep: Peptide chain release factor subunit 1
- Pyrococcus furiosus
Length = 420
Score = 111 bits (268), Expect = 2e-23
Identities = 57/150 (38%), Positives = 83/150 (55%)
Frame = +3
Query: 399 RNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRL 578
R+ +++++KK I L+ RG GT +ISL IP +S+V + L +E+ TA NIKS+ R
Sbjct: 7 RDAQLYELKKKIDELKKIRGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKTTRK 66
Query: 579 SVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDN 758
+VLGA+ LKLY + P NGL ++ G + EG P +P+N LY CD
Sbjct: 67 NVLGALERAMQHLKLYKQTPENGLALFVGNVSEMEGVTDIRLWAIIPPEPLNVRLYRCDQ 126
Query: 759 KFHTEALTALLADDNKFGFIVMDGNGALFG 848
F TE L +L +G I ++ N A G
Sbjct: 127 TFVTEPLEEMLRVKEAYGLITVEKNEATIG 156
>UniRef50_Q58239 Cluster: Peptide chain release factor subunit 1;
n=12; Euryarchaeota|Rep: Peptide chain release factor
subunit 1 - Methanococcus jannaschii
Length = 421
Score = 104 bits (250), Expect = 3e-21
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
Frame = +3
Query: 408 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 587
+++ KK++K L+ +G GT +ISL IP +IS V++ L +E ASNIKS+ R +V
Sbjct: 8 QLYLFKKMLKELKSKKGKGTELISLYIPAGRRISDVAQHLREEMSQASNIKSKSTRKNVQ 67
Query: 588 GAITSVQHRLKLYTKVPPNGLVIYCGTIV-TEEGKEKKVNIDFEPFKPINTSLYLCDNKF 764
AI ++ RLKL + G+VI+ G + + G EK EP +PI T +Y CD++F
Sbjct: 68 SAIEAILQRLKLLKEPLEKGVVIFAGMVPRSGPGTEKMETYVIEPPEPIKTYIYRCDSEF 127
Query: 765 HTEALTALLADDNKFGFIVMDGNGA 839
+ E L L D + +G I++D N A
Sbjct: 128 YLEPLEEFLEDKDAYGVILVDRNEA 152
>UniRef50_Q9HNF0 Cluster: Peptide chain release factor subunit 1;
n=7; Euryarchaeota|Rep: Peptide chain release factor
subunit 1 - Halobacterium salinarium (Halobacterium
halobium)
Length = 416
Score = 102 bits (245), Expect = 1e-20
Identities = 57/155 (36%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Frame = +3
Query: 369 NKMSEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTA 548
++ E S DR ++ +K+I+ L+ G+GT ++++ IPP QIS V + E A
Sbjct: 2 SEQDEVPSEDRRK--YEFRKVIEELKDYEGSGTQLVTIYIPPDKQISDVVAHVTQEHSEA 59
Query: 549 SNIKSRVNRLSVLGAITSVQHRLKLYTKVPP-NGLVIYCGTIVTEEGKEKKVNIDFE-PF 722
SNIKS+ R +V A+TS++ RL+ Y PP NG+V++ G + + G+ V E P
Sbjct: 60 SNIKSKQTRTNVQDALTSIKDRLRYYDTFPPDNGMVVFSGAVDSGGGRTDMVTEVLESPP 119
Query: 723 KPINTSLYLCDNKFHTEALTALLADDNKFGFIVMD 827
+PI + Y CD+ F TE L +L D +G IV+D
Sbjct: 120 QPIESFRYHCDSAFLTEPLAEMLGDKGLYGLIVLD 154
>UniRef50_Q74N59 Cluster: NEQ052; n=1; Nanoarchaeum equitans|Rep:
NEQ052 - Nanoarchaeum equitans
Length = 358
Score = 96.7 bits (230), Expect = 7e-19
Identities = 50/147 (34%), Positives = 79/147 (53%)
Frame = +3
Query: 408 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 587
E +K+K L++ L+ G GT ++SL IP I ++ L E+ TA+NIK R +V
Sbjct: 5 EKYKLKSLLRQLKSIEGRGTELVSLYIPSNYPIGKILDQLNYEYATAANIKDDTTRKNVQ 64
Query: 588 GAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFH 767
A+ + + LK + K+P NGLVI+ G I ++ ++ P K N LY CD+KF+
Sbjct: 65 AALAKIINYLKDFKKIPENGLVIFAGNIAGRGDQDVRLWAIVPPEKS-NLKLYRCDSKFY 123
Query: 768 TEALTALLADDNKFGFIVMDGNGALFG 848
E L +L + +G + +D A G
Sbjct: 124 VEPLEEMLEEKKLYGIVTIDKGEAAIG 150
>UniRef50_Q8TS00 Cluster: Peptide chain release factor subunit 1-2;
n=9; Euryarchaeota|Rep: Peptide chain release factor
subunit 1-2 - Methanosarcina acetivorans
Length = 415
Score = 95.1 bits (226), Expect = 2e-18
Identities = 52/147 (35%), Positives = 83/147 (56%)
Frame = +3
Query: 408 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 587
E + KK +++L+ G T +ISL IPP QIS V+K L +E ASNI S++ R +V
Sbjct: 8 EKYVFKKQLETLKSKNGRSTELISLYIPPDKQISDVTKHLREEHEQASNIISKLIRNNVQ 67
Query: 588 GAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFH 767
A+ S+ +L+ K+P NG+V + GT+ T + VN P +P+ +Y CD+ F+
Sbjct: 68 EALHSLLAKLRSLHKIPENGIVYFTGTVDTGANRTGMVNEVLFPPEPVADYIYRCDSVFY 127
Query: 768 TEALTALLADDNKFGFIVMDGNGALFG 848
E L +L + +G +++D A G
Sbjct: 128 LEPLEEMLRECTTYGLLLLDLREATIG 154
>UniRef50_Q46FF0 Cluster: Peptide chain release factor, subunit 1;
n=2; Methanosarcinaceae|Rep: Peptide chain release
factor, subunit 1 - Methanosarcina barkeri (strain
Fusaro / DSM 804)
Length = 415
Score = 92.7 bits (220), Expect = 1e-17
Identities = 52/153 (33%), Positives = 82/153 (53%)
Frame = +3
Query: 408 EIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVL 587
E + KK +++L G T +ISL IP QIS V+ L +E AS IKS++ +V
Sbjct: 8 EKYVFKKKLETLRNKNGKSTELISLYIPSDKQISDVTNHLREEHEQASKIKSKLTSNNVQ 67
Query: 588 GAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFH 767
GA+ S+ +L+ K+P NG+V + G I T + V P +P+ +Y CD+ F+
Sbjct: 68 GALDSLLAKLRSLNKIPENGIVYFTGVIDTGANRTGMVTEVLIPPEPVVDYIYHCDSVFY 127
Query: 768 TEALTALLADDNKFGFIVMDGNGALFGTPSRKH 866
E L +L + + +GFI++D A G +H
Sbjct: 128 LEPLEEMLRECSTYGFILLDLREATIGMLVGRH 160
>UniRef50_Q9YAF1 Cluster: Peptide chain release factor subunit 1;
n=9; Thermoprotei|Rep: Peptide chain release factor
subunit 1 - Aeropyrum pernix
Length = 373
Score = 85.4 bits (202), Expect = 2e-15
Identities = 47/144 (32%), Positives = 79/144 (54%)
Frame = +3
Query: 417 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAI 596
++ +L+K L+ T ++SL IPP +S V +L E+ NIK + R +V A+
Sbjct: 16 ELARLLKELKKWSAPATVLLSLYIPPGRPLSDVMTLLRQEYSITDNIKLKRTRQAVKRAL 75
Query: 597 TSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEA 776
++ RL++ T PPNGLV++CG ++ GK + F P +PI Y D +F T+
Sbjct: 76 SAAMDRLQMLTSTPPNGLVLFCGEDMS-TGKFE--CFMFSPPEPIRVFYYRTDKRFITDF 132
Query: 777 LTALLADDNKFGFIVMDGNGALFG 848
L ++ D+N G I+++ + A G
Sbjct: 133 LEDMVEDNNAIGIIIVERDQATIG 156
>UniRef50_UPI000150A1F7 Cluster: eRF1 domain 1 family protein; n=1;
Tetrahymena thermophila SB210|Rep: eRF1 domain 1 family
protein - Tetrahymena thermophila SB210
Length = 519
Score = 84.2 bits (199), Expect = 4e-15
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 4/163 (2%)
Frame = +3
Query: 375 MSEESSADRNVEI--WKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTA 548
MS+++ + ++I ++++K ++ L RG TS +SL IP + ++ V L E A
Sbjct: 63 MSKQAEEQKRLQISQYQLRKQLQMLRNMRGEQTSCVSLYIPERKKLYEVVNYLQQEESGA 122
Query: 549 SNIKSRVNRLSVLGAITSVQHRLKLYT--KVPPNGLVIYCGTIVTEEGKEKKVNIDFEPF 722
++IK+ NR SV A++ ++ RLK + K P G++ +C + + K + I +P
Sbjct: 123 ASIKNTQNRKSVQSALSMLRERLKNFNLHKKYPKGMIFFCADSL--DSKRLLIEI-LDPP 179
Query: 723 KPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGT 851
K + + Y C+ F+ + L +L D +GF+V DG+G L T
Sbjct: 180 KAVQSFRYSCNTIFYLDDLEYMLKDQPTYGFVVADGHGYLIAT 222
>UniRef50_Q8ZU81 Cluster: Peptide chain release factor subunit 1;
n=5; Thermoproteaceae|Rep: Peptide chain release factor
subunit 1 - Pyrobaculum aerophilum
Length = 388
Score = 79.8 bits (188), Expect = 8e-14
Identities = 43/142 (30%), Positives = 73/142 (51%)
Frame = +3
Query: 417 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAI 596
+++ + L+ +G T++I+L I + I V +L E+ TA+NIK + R V +
Sbjct: 18 ELRAFVNLLKKFKGYATTLITLYINAERPIPDVVNLLRSEWSTAANIKDKTTRTHVQDTL 77
Query: 597 TSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEA 776
+ + LK K P NG+ ++ G + +G + V P +PINT Y+CD FHTE
Sbjct: 78 ERIINNLKGEAKAPENGMAVFAGFHMINQGNYEWVYYVVIPPQPINTFKYICDTAFHTEL 137
Query: 777 LTALLADDNKFGFIVMDGNGAL 842
L L +G +V++ A+
Sbjct: 138 LEDQLHAGVVYGIVVIERGEAV 159
>UniRef50_Q3UUT4 Cluster: 16 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A130075O06
product:hypothetical protein, full insert sequence; n=1;
Mus musculus|Rep: 16 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A130075O06
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 103
Score = 37.1 bits (82), Expect = 0.58
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 690 EKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTPSRKH 866
+KK +DFEPFKP++TSL + D + EA L+ ++ V+ G+ L P RKH
Sbjct: 28 KKKARVDFEPFKPMSTSLRVADAR---EAHVTQLSGTARW-LCVVGGSAVLCHNP-RKH 81
>UniRef50_Q97DK8 Cluster: Uncharacterized conserved protein, phnB
family; n=3; Bacteria|Rep: Uncharacterized conserved
protein, phnB family - Clostridium acetobutylicum
Length = 294
Score = 34.7 bits (76), Expect = 3.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 588 GAITS-VQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKF 764
G++T + ++ YT + N + + E K K I+F FK NT+ DN F
Sbjct: 142 GSVTGKAEEAMEFYTSIFENSEITFINRYAEGEAKAKNAKINFASFKLNNTNFSASDNGF 201
Query: 765 HT 770
T
Sbjct: 202 DT 203
>UniRef50_A0CCA2 Cluster: Chromosome undetermined scaffold_167,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_167,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 243
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = -2
Query: 413 YFDISIGRRFFRHFVSLFI*LINHKHYICINN*NNVFAQHQNFK*TNTMEREPEFQFQTA 234
Y I R + FVS+F LI H C N+ NN F Q Q + + E F
Sbjct: 54 YVTIPCARSLSQIFVSVFFNLIYLFHIFCNNSINNYFQQMQYYYFSQYFRSHSEMHFNNL 113
Query: 233 LI 228
LI
Sbjct: 114 LI 115
>UniRef50_UPI00006CC094 Cluster: hypothetical protein
TTHERM_00215930; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00215930 - Tetrahymena
thermophila SB210
Length = 905
Score = 33.1 bits (72), Expect = 9.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 417 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEF 539
K++ LI+ L NGT+ +SL I K Q +++S+ L DEF
Sbjct: 182 KVEYLIEQLLEGSNNGTNTLSLKILQKQQANQLSQDLKDEF 222
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 860,668,853
Number of Sequences: 1657284
Number of extensions: 16982657
Number of successful extensions: 40531
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 39110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40515
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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