BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_D18
(870 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 26 1.7
AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein. 25 4.0
DQ388479-1|ABD43194.1| 79|Anopheles gambiae adipokinetic hormo... 24 6.9
AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled ... 24 6.9
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 23 9.2
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 9.2
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 25.8 bits (54), Expect = 1.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 827 IHNNETKLVIISQQCR*SLGVELVVAEIKRCVDRLERLKINVHFLLLTFF 678
+H + ++ Q LG L+ + R VDR ++ HF + TFF
Sbjct: 112 VHQLQDLAALVLQDLPTELGEYLI--SVNRRVDRFSKIYCCCHFSMATFF 159
>AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein.
Length = 438
Score = 24.6 bits (51), Expect = 4.0
Identities = 12/58 (20%), Positives = 29/58 (50%)
Frame = -3
Query: 643 FGGTLVYSLSRCCTEVIAPSTERRFTRDLILEAVPNSSANIFDTLEI*SLGGMIRDII 470
FG LV++ + C + RR+ +LE N + + F +++ + G ++ +++
Sbjct: 270 FGLALVFTPGKSCGDTHGQVGTRRYMAPEVLEGAINFTRDAFLRIDVYACGLVLWELV 327
>DQ388479-1|ABD43194.1| 79|Anopheles gambiae adipokinetic hormone
I preproprotein protein.
Length = 79
Score = 23.8 bits (49), Expect = 6.9
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +3
Query: 270 SIRLFKVLVLCKDIILVIYTNIVF 341
+++LF VL++C ++L+ + F
Sbjct: 3 TVKLFTVLLICASLMLITEAQLTF 26
>AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled
receptor 3 protein.
Length = 605
Score = 23.8 bits (49), Expect = 6.9
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 787 CWLMITSLVSLLWMVTVHYSVPL 855
CW LV+ W ++ +S+P+
Sbjct: 337 CWSRARKLVAAAWSFSILFSLPI 359
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 88 TCLGVTEIXKNPRIPAQEEKSEQ 156
+C+G T + KNPR + +E Q
Sbjct: 63 SCIGCTNMLKNPRCRSVKEIGAQ 85
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.4 bits (48), Expect = 9.2
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = -3
Query: 652 TRPFGGT-----LVYSLSRCCTEVIAPSTERRFTRDLILEAVPNSSANI 521
T+P GGT ++ LSR E+ RR+ RD+ E NI
Sbjct: 2932 TQPIGGTKSRGAILLELSRELRELREELEARRYDRDMSTETSKRDIPNI 2980
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 918,131
Number of Sequences: 2352
Number of extensions: 17308
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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