Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_D11
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23450-3|AAN39678.1| 132|Caenorhabditis elegans Hypothetical pr... 140 8e-34
U23450-4|AAN39679.1| 130|Caenorhabditis elegans Hypothetical pr... 133 9e-32
AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical ... 29 4.0
Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF101318-2|AAK68599.1| 331|Caenorhabditis elegans Seven tm rece... 28 5.3
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 28 5.3
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 27 9.2
AC024755-5|AAK84601.1| 153|Caenorhabditis elegans Hypothetical ... 27 9.2
>U23450-3|AAN39678.1| 132|Caenorhabditis elegans Hypothetical
protein C30B5.2a protein.
Length = 132
Score = 140 bits (339), Expect = 8e-34
Identities = 63/125 (50%), Positives = 90/125 (72%)
Frame = +2
Query: 89 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAG 268
M G++ + +LAFAG +G+TF++L CALP+Y W P FV+ FY+L P+P +IARR +
Sbjct: 1 MGGVRAVAALAFAGVVGLTFLVLGCALPRYGTWTPMFVITFYVLSPVPLLIARRFQEDMT 60
Query: 269 GSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIF 448
G+N AC+E A+FIT G ++S+FALPIVLA AG I AC+L G+VI++ TI+ +F +
Sbjct: 61 GTN-ACIELALFITTGIVISAFALPIVLAHAGTIANSACFLVNTGSVIMFGTIIAYFYLH 119
Query: 449 DMDDS 463
DDS
Sbjct: 120 RDDDS 124
>U23450-4|AAN39679.1| 130|Caenorhabditis elegans Hypothetical
protein C30B5.2b protein.
Length = 130
Score = 133 bits (322), Expect = 9e-32
Identities = 62/125 (49%), Positives = 89/125 (71%)
Frame = +2
Query: 89 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAG 268
M G++ + +LAFAG +G+TF++L CALP + W P FV+ FY+L P+P +IARR +
Sbjct: 1 MGGVRAVAALAFAGVVGLTFLVLGCALP--RTWTPMFVITFYVLSPVPLLIARRFQEDMT 58
Query: 269 GSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIF 448
G+N AC+E A+FIT G ++S+FALPIVLA AG I AC+L G+VI++ TI+ +F +
Sbjct: 59 GTN-ACIELALFITTGIVISAFALPIVLAHAGTIANSACFLVNTGSVIMFGTIIAYFYLH 117
Query: 449 DMDDS 463
DDS
Sbjct: 118 RDDDS 122
>AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical
protein F52G3.4 protein.
Length = 1009
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 262 CWRFKFRLYGNCSIYHNGIFSQLFC 336
C+R++ RLY C H+G +L+C
Sbjct: 736 CYRYQDRLYYVCRFQHHGSIIELWC 760
>Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical
protein F17C8.1 protein.
Length = 1253
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 107 LVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAGGSNSAC 286
+VSL I F ACA + + P + +++C + +I A + A
Sbjct: 96 IVSLCLCAIIFAMFAFTACAAQYQRFYMPTSFLCTFLICLVTLLIFSAENQAAFMTPVAS 155
Query: 287 METAVFITMGFLVSSFALPIVLA-RAGVIF 373
+ T+ + + + + LP+ L G+I+
Sbjct: 156 LATSFQVVL-LIYTVIPLPLYLCILIGIIY 184
>AF101318-2|AAK68599.1| 331|Caenorhabditis elegans Seven tm
receptor protein 66 protein.
Length = 331
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 317 FLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFD 451
F ++F LPI ++ A + W YLT + V L I + +FD
Sbjct: 75 FSATNFQLPINISNAFITVWSCFYLTTFSFISV-LFIYRYLCLFD 118
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 251 HTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGN 406
HT GA ++ ++TA ++SS P + A ++ WG + GN
Sbjct: 163 HTPGAVFNDLWRLDTATLKWSRVIISSAPYPSAMCYASLVTWGTQLILFGGN 214
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -3
Query: 414 TITLPASVR*HAPQKITPALARTIGSAKELTKNPIVINTAVSIQA 280
T+T+P++ + P+ +PA R+ S++E+T P V A ++A
Sbjct: 50 TLTMPSTSQDIQPES-SPAHGRSAPSSQEITSPPTVRRVATPLEA 93
>AC024755-5|AAK84601.1| 153|Caenorhabditis elegans Hypothetical
protein Y34B4A.5 protein.
Length = 153
Score = 27.5 bits (58), Expect = 9.2
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +1
Query: 100 KRFGVV---GIRGFNWNDICHTSLCLTTIQTMVAILRCAILHSVPNTYDDR*EAY*WCWR 270
K+FG G GF+ ND+C +++ +T QT ++ R ++ Y + C
Sbjct: 54 KQFGFACGAGFEGFSNNDVCMSNI-FSTKQTQISDCRATFAKNLLADYKNH------C-- 104
Query: 271 FKFRLYGNCSIYHNGIFSQLFCATDSSRQGWCDF 372
F Y C N +F C ++SS G C++
Sbjct: 105 MYFEQYTGC---FNALFDHSSCNSESSWWG-CEY 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,202,123
Number of Sequences: 27780
Number of extensions: 322947
Number of successful extensions: 846
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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