Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_D10
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.12 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    27   0.48 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     27   0.63 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.3  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   4.4  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   4.4  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    24   4.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   7.7  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
 Frame = +1

Query: 496 ELTQSIYIPKGINVPSLAREVDWEFNPL--NVKVGSHITGGDLYGIVHENTLVKHRMLVP 669
           E     YIPKG +   ++ ++ W   P   ++   SH  GG    I    T  K R    
Sbjct: 697 EAKNDAYIPKGGDKKIISTKLQWNAKPKIGSLDNASHKPGGGDKRIESIKTDFKERAKPK 756

Query: 670 PKAKGTVTYIAPAGNYKVTDVVLE 741
             +K  +TY    G+ K+    L+
Sbjct: 757 IGSKDNITYKPGGGDVKIVHQKLD 780


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 27.5 bits (58), Expect = 0.48
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +1

Query: 460 FDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 567
           +DG Q  L+ I+E+ ++  +  G+++      V+W+
Sbjct: 171 YDGFQVDLRHIDEMNETNVVEVGVDLSEFYTSVEWD 206


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 27.1 bits (57), Expect = 0.63
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 307 NELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVEL 435
           N   GEI R+  D+  ++V +E+   T GDP +      SVE+
Sbjct: 547 NTQTGEI-RISRDVRFLEVDDESKEQTYGDPKIEDNPTESVEI 588


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = -3

Query: 558  DLPGQGRHVDTLGDVDGLSQLVDVLE---GTLNTVKDGTQDTRTKFY 427
            D PG+GR V    DV+    L DV E   G +    D + DT  K Y
Sbjct: 2122 DGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTVWKVY 2168


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 470 IPSKMEPKIPGPSSTDKGFPVRSTGSPTVT 381
           + +K EP+ PG  +T    P  +T  PT T
Sbjct: 84  VNAKCEPQSPGDQTTTTLRPATTTLRPTTT 113


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 470 IPSKMEPKIPGPSSTDKGFPVRSTGSPTVT 381
           + +K EP+ PG  +T    P  +T  PT T
Sbjct: 84  VNAKCEPQSPGDQTTTTLRPATTTLRPTTT 113


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -3

Query: 666 DQHPVLDQSVLMYNTIQISTGDVGSDLNI*WVKFPVDLPGQG 541
           D  PVL++       + IS   +G+ ++  +V +P+ +PG+G
Sbjct: 104 DIRPVLERYTRRGRMLSISNLWLGAFISACFVTYPLFVPGRG 145


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 448 LGS-IFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 567
           LGS  +DG +  L+ ++E + S  +  G+++      V+W+
Sbjct: 170 LGSWTYDGFKVDLRHMDEKSGSNIVDVGVDLSEFYMSVEWD 210


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = -3

Query: 345 VTFKTDNLTDEFIVTDTDQLVHSRSGHFFGSDDGSRYGEDISE--PLLILLIGD--RPQA 178
           V  +TD  T     TDT+ ++         S D SR GE + +   L+ L  GD  R + 
Sbjct: 672 VKLETDAETAGGGATDTESVLGRAIADLVASGDDSRQGEMLRKLLALIKLFAGDVNRSRQ 731

Query: 177 AFARHF 160
             A H+
Sbjct: 732 LLASHW 737


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,338
Number of Sequences: 2352
Number of extensions: 16144
Number of successful extensions: 54
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)