Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_D06
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162...   308   3e-84
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315...   297   6e-81
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043...    41   0.001
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412...    40   0.002
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081...    29   5.4  
07_03_0894 + 22362717-22363514                                         29   5.4  
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336...    29   5.4  
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364...    29   5.4  
04_04_0147 - 23109072-23109372,23109638-23109752,23109885-231099...    29   5.4  
03_02_0243 - 6744164-6744415,6744518-6745135                           29   5.4  
02_01_0516 + 3727742-3727936,3729115-3729192,3729292-3729552,372...    29   5.4  
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69...    28   7.2  
10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175     28   9.5  
05_05_0256 - 23647736-23648947                                         28   9.5  

>06_03_0510 -
           21615724-21615909,21615992-21616075,21616164-21616217,
           21616324-21616371,21616529-21616611,21616963-21617113,
           21617648-21617785,21617966-21618094,21618391-21618596,
           21618734-21618845,21619145-21619204,21619331-21619429,
           21619520-21619575,21620230-21620313,21621407-21621500
          Length = 527

 Score =  308 bits (756), Expect = 3e-84
 Identities = 152/203 (74%), Positives = 166/203 (81%), Gaps = 2/203 (0%)
 Frame = +3

Query: 168 LTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSG 347
           + Y+TVSGV GPLVILD+VK PK+ EIV ++L DGT R GQVLEV G KAVVQVFEGTSG
Sbjct: 59  MEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSG 118

Query: 348 IDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSRI 527
           ID K T  +FTG++L+TPVS DMLGR+FNGSGKPID GPPIL E +LDI G  INP  R 
Sbjct: 119 IDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERT 178

Query: 528 YPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICXQAGLVK--VPGKSVLD 701
           YPEEMIQTGIS IDVMNSIARGQKIP+FSAAGLPHNEIAAQIC QAGLVK    GK    
Sbjct: 179 YPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKSLEKGKHAEG 238

Query: 702 DHEDNFAIVFAAMGVNMETAXFF 770
             +DNFAIVFAAMGVNMETA FF
Sbjct: 239 GEDDNFAIVFAAMGVNMETAQFF 261


>01_06_0458 +
           29531069-29531126,29531247-29531302,29531407-29531505,
           29531989-29532048,29532285-29532396,29532459-29532694,
           29533092-29533220,29533325-29533462,29534043-29534193,
           29534394-29534476,29534658-29534705,29534828-29534881,
           29534971-29535054,29535152-29535337
          Length = 497

 Score =  297 bits (729), Expect = 6e-81
 Identities = 155/213 (72%), Positives = 169/213 (79%), Gaps = 12/213 (5%)
 Frame = +3

Query: 168 LTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSG 347
           + Y+TVSGV GPLVILD+VK PK+ EIV ++L DGT R GQVLEV G KAVVQVFEGTSG
Sbjct: 19  MEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSG 78

Query: 348 IDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQ---------G 500
           ID K T  +FTG++L+TPVS DMLGRVFNGSGKPID GPPIL E +LDI          G
Sbjct: 79  IDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEAYLDISDFDIGFAGAG 138

Query: 501 QPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICXQAGLVKV 680
             INP  R YPEEMIQTGIS IDVMNSIARGQKIP+FSAAGLPHNEIAAQIC QAGLVK 
Sbjct: 139 SSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKR 198

Query: 681 PGKS--VLDDHED-NFAIVFAAMGVNMETAXFF 770
             KS  +L+  ED NFAIVFAAMGVNMETA FF
Sbjct: 199 LEKSDNILESSEDENFAIVFAAMGVNMETAQFF 231


>06_03_1014 -
           26902971-26903085,26903182-26903270,26904302-26904380,
           26904488-26904585,26904848-26904952,26905031-26905117,
           26905218-26905412,26905890-26905996,26906559-26906754,
           26906865-26906966,26907100-26907171,26907404-26907505,
           26907638-26907675,26907769-26907880,26907972-26908028,
           26908122-26908177,26908283-26908409,26908856-26908910,
           26908919-26909049
          Length = 640

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 24/90 (26%), Positives = 48/90 (53%)
 Frame = +3

Query: 183 VSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGIDAKN 362
           V  V+GP+V+ D +      E+V++   D  +  G+++ + G  A +QV+E T+G+   +
Sbjct: 60  VLAVSGPVVVADGMGGAAMYELVRVG-NDNLI--GEIIRLEGDSATIQVYEETAGLMVND 116

Query: 363 TLCEFTGDILRTPVSEDMLGRVFNGSGKPI 452
            +   T   L   +   +LG +F+G  +P+
Sbjct: 117 PVLR-TRKPLSVELGPGILGNIFDGIQRPL 145


>02_01_0561 +
           4120268-4120339,4121462-4121588,4121715-4121770,
           4121841-4121912,4122017-4122128,4122247-4122284,
           4122412-4122513,4122619-4122675,4122755-4122826,
           4122992-4123093,4123210-4123405,4123988-4124094,
           4124497-4124691,4124771-4124857,4124905-4124913,
           4125599-4125703,4126067-4126164,4126250-4126328,
           4126912-4127000,4127086-4127200
          Length = 629

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
 Frame = +3

Query: 156 SQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFE 335
           S+    Y  V  V+GP+V+ D +      E+V++   D  +  G+++ + G  A +QV+E
Sbjct: 13  SEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVG-HDNLI--GEIIRLEGDSATIQVYE 69

Query: 336 GTSGIDAKNTLCEFTGDILRTPVSEDM----LGRVFNGSGKPI 452
            T+G+   + +      +   P+S ++    LG +F+G  +P+
Sbjct: 70  ETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPL 112


>11_08_0092 -
           28307180-28307380,28307471-28307936,28308008-28308117,
           28308206-28308493,28309024-28309059
          Length = 366

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 143 WRLPGHVPWSPGRERSPLPFF 81
           WR+ GH+P   G  R P+ FF
Sbjct: 252 WRVQGHLPQRQGPRRVPIDFF 272


>07_03_0894 + 22362717-22363514
          Length = 265

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 481 SSAKIGGPLSMGLPEPLNTRPNMSSETGVRRMSPVNSQSVFFASIPDV 338
           SSA     L+ GLP  +  R +++ E GVR +    ++S F A  P +
Sbjct: 56  SSAAKADALAAGLPRAVAVRADVADEAGVRSLFDA-AESAFGAGAPHI 102


>06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,
            3363820-3364098,3364189-3364386,3364475-3365110,
            3365209-3365463,3365579-3365685,3365770-3369566,
            3369677-3370166,3370918-3371308,3371481-3371573,
            3371687-3371810,3372544-3372791
          Length = 2380

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
 Frame = +3

Query: 129  SWQSPGXFISQPRLTYKTVSGVN----------GPLVILDEVKFPKFSEIVQLKLADGTL 278
            +W  P      P L YK   G+N          G  V++ + KF KF E + L L +  L
Sbjct: 952  NWVKPADSEPPPLLVYKWCQGINNLQDVWDTSDGQCVVMLQTKFEKFFEKIDLTLLNRLL 1011

Query: 279  R 281
            R
Sbjct: 1012 R 1012


>05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,
            3645328-3645525,3645614-3646249,3646352-3646606,
            3646718-3646824,3646909-3650705,3650816-3651305,
            3652043-3652433,3652621-3652713,3652818-3652941,
            3653871-3654118
          Length = 2350

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
 Frame = +3

Query: 129  SWQSPGXFISQPRLTYKTVSGVN----------GPLVILDEVKFPKFSEIVQLKLADGTL 278
            +W  P      P L YK   G+N          G  V++ + KF KF E + L L +  L
Sbjct: 952  NWVKPADSEPPPLLVYKWCQGINNLQDVWDTSDGQCVVMLQTKFEKFFEKIDLTLLNRLL 1011

Query: 279  R 281
            R
Sbjct: 1012 R 1012


>04_04_0147 -
           23109072-23109372,23109638-23109752,23109885-23109970,
           23111398-23111654
          Length = 252

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 528 YPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICXQAGLVKVPGKSV 695
           +PE    +G    DV+  ++ G  +P   AAGL      + +   AGL +V   ++
Sbjct: 25  HPERHFTSGEVVRDVIMGVSDGLTVPFALAAGLSGASAPSSLVLTAGLAEVAAGAI 80


>03_02_0243 - 6744164-6744415,6744518-6745135
          Length = 289

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -1

Query: 253 CTISENLGNLTSSKMTRGPFTPDTVL*VSLG 161
           C ++E++  L S  +T  P TPDTVL VS G
Sbjct: 23  CEVNESM--LDSVTVTHAPLTPDTVLEVSGG 51


>02_01_0516 +
           3727742-3727936,3729115-3729192,3729292-3729552,
           3729921-3730238,3730527-3730685,3730768-3730961,
           3731644-3731647
          Length = 402

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 195 NGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQV 329
           NGP+ + +  KF   ++ +  KLAD T   G    + G  +V  V
Sbjct: 321 NGPMGVFEFEKFAAGTDAIAKKLADLTTTKGATTIIGGGDSVAAV 365


>03_01_0085 +
           690618-691012,691114-691193,691775-691959,692363-693320,
           693391-693518,693951-694010,694113-694163,694704-694821,
           694990-695915,695916-697707,697810-697943,698029-698526
          Length = 1774

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 26/99 (26%), Positives = 39/99 (39%)
 Frame = +3

Query: 120 RNMSWQSPGXFISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLE 299
           R+++W     F+S  ++ Y   S  NG     D  +  K      L   +   +SG    
Sbjct: 661 RSVNWARSDPFVSPVKVKYSNSSQKNG-----DATRHLK-----NLSKQNTERKSGAARN 710

Query: 300 VSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDM 416
              S + V +    SG + K+T CE T       VS DM
Sbjct: 711 FENSHSPVGMDIPKSGTNVKSTRCETTSPSSHGVVSSDM 749


>10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175
          Length = 294

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -1

Query: 442 PEPLNTRPNMSSETGVRRMSPVNSQSVFFASIPDVPSNTWTTALEPLTSS 293
           P P    P  S  TG     P    S      PD+P  TWTT L+ +T++
Sbjct: 202 PPPPPPPPPPSDATGGEVSIPCFPFSPLPFIEPDLPELTWTTDLDDITAT 251


>05_05_0256 - 23647736-23648947
          Length = 403

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 664 PVLSRSPASQSWTTTRTTS 720
           P L  +PAS SWTTT +T+
Sbjct: 330 PGLGSAPASTSWTTTESTT 348


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,234,868
Number of Sequences: 37544
Number of extensions: 583987
Number of successful extensions: 1748
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)