Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_D02
         (759 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC3G9.04 |ssu72||phosphoric ester hydrolase |Schizosaccharomyc...   189   4e-49
SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces po...    27   2.9  
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo...    27   3.8  
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po...    26   6.7  
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch...    25   8.9  
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos...    25   8.9  
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos...    25   8.9  
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha...    25   8.9  

>SPAC3G9.04 |ssu72||phosphoric ester hydrolase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 197

 Score =  189 bits (460), Expect = 4e-49
 Identities = 89/192 (46%), Positives = 129/192 (67%), Gaps = 2/192 (1%)
 Frame = +1

Query: 190 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 369
           ++L ++V+C+SN NRSMEAH  L   G+ V S+GTG  V+LPG S D+PN Y+FG  YDE
Sbjct: 5   TNLQISVICASNQNRSMEAHNVLKNAGYQVDSFGTGSAVRLPGPSIDKPNIYQFGYPYDE 64

Query: 370 IYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWF 549
           IY +L  +D   YT NGLL MLDRNRRIK  P ++Q  +  ++++ITCEER YD + E  
Sbjct: 65  IYKELEAQDSRLYTANGLLKMLDRNRRIKRAPCRWQDQDSIYNIVITCEERCYDAICEDL 124

Query: 550 GSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDD-LDNDIXELLHEFESX 726
             R    N+PV+++N+DI+DNHEEA++G   I D+V K+ ++ D L+     ++ +F+S 
Sbjct: 125 YRRGETLNRPVYLINVDIKDNHEEASVGGKAILDLVNKLTEAQDKLEELFPSIMADFQSN 184

Query: 727 CHR-PILNCIMF 759
             + P+L  I F
Sbjct: 185 HPKLPVLYTIHF 196


>SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 278

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +2

Query: 8   PMRMMN*RIKLCIFYDVDNKIIFCKVQLSFLIFRFKQSWNH*ITNN 145
           P +  N  ++ CI   VD  +  CK  LS        SW   I  N
Sbjct: 101 PSKKQNRLLQSCITKHVDRLLDLCKRNLSTFTIDISSSWRQNIIEN 146


>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1388

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +1

Query: 496  DVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLI-SDMVTKMAQ 672
            +V++  E R+  + +  +GS    YN  V   ++  QD H    I A L+ +      A 
Sbjct: 993  EVLLEKEIRLLYRAMIRYGSLEHRYNDIVKYADLTTQDAHVIKKIAADLVTASRKAVSAA 1052

Query: 673  SDDLDND 693
              DL ND
Sbjct: 1053 EKDLSND 1059


>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 594

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +1

Query: 415 NGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIY 570
           N L+  LD N + K  PEK  +   R+     C   VYD  ++   + RS +
Sbjct: 513 NDLVRSLDENLKTKSGPEKLYLIMARY-----CLRCVYDDKMDSLWNSRSFW 559


>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 632

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 322 SADRPNCYEFGVLYDEIYNDLMEKDKNYYTQNGL 423
           S D+ N ++F + +DE    L   + N++  N L
Sbjct: 587 SNDKQNTHDFQISHDENLIQLFNDESNFFNLNDL 620


>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 731

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 664 MAQSDDLDNDIXELLHEFESXCHR 735
           MAQ D   + I E+ H+ ES C+R
Sbjct: 130 MAQYDQKLSTIKEMYHKLESYCNR 153


>SPBC119.07 |ppk19||serine/threonine protein kinase
           Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1706

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 322 SADRPN--CYEFGVLYDEIYNDLMEKDKN 402
           SA +PN  C  +G   D+IY D+M  + N
Sbjct: 316 SAKQPNDACSLYGSRIDDIYRDIMPPNNN 344


>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
           alpha-glucosyltransferase Alg10|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 445

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 546 PFNYLIIYSFFTSYYDIKSFITHLKFF 466
           PF+YLI+Y FF     ++  +T L FF
Sbjct: 344 PFSYLILYYFFLDISKLQ--MTSLTFF 368


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,937,822
Number of Sequences: 5004
Number of extensions: 57970
Number of successful extensions: 121
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)