Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_D01
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   1.3  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   5.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   9.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.3  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 527 HADYLKNEASSKSEFLALCKQLGIQXEKIKRE 622
           H D L N  +S     A+CK +G+   +I R+
Sbjct: 14  HHDTLHNIYTSMKPVYAICKLIGLNTLRIGRK 45


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 527 HADYLKNEASSKSEFLALCKQLGIQXEKIKRE 622
           H D L N  +S     A+CK +G+   +I R+
Sbjct: 14  HHDTLHNIYTSMKPVYAICKLIGLNTLRIGRK 45


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +1

Query: 316 ETEADTKNLFGRYGSQRMKDW-QDVERNYEKENLY 417
           ET+ +      R+     +DW  ++E  Y+KE  Y
Sbjct: 80  ETQKNGSKKIMRHLIDHKRDWWNELEEKYDKEGEY 114


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = -3

Query: 224 WMALLIFSLTAMTFFCQSLETCLRLINQS*SFPMFISMGMLLSSML 87
           W+ L+  S T + +        + + + S +FP+ +S+ +LLS ++
Sbjct: 133 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSVPVLLSGLI 178


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = -3

Query: 224 WMALLIFSLTAMTFFCQSLETCLRLINQS*SFPMFISMGMLLSSML 87
           W+ L+  S T + +        + + + S +FP+ +S+ +LLS ++
Sbjct: 366 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSVPVLLSGLI 411


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = -3

Query: 224 WMALLIFSLTAMTFFCQSLETCLRLINQS*SFPMFISMGMLLSSML 87
           W+ L+  S T + +        + + + S +FP+ +S+ +LLS ++
Sbjct: 366 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSVPVLLSGLI 411


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +1

Query: 376 WQDVERNYEKENLY 417
           W ++E  Y+K+ +Y
Sbjct: 101 WNELEAKYDKDGVY 114


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 579 CVNNLVSXVRRSRENXWRNCRSCL 650
           C+    S ++ S    W+  RSC+
Sbjct: 65  CIGRCASYIQVSGSKIWQMERSCM 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,590
Number of Sequences: 336
Number of extensions: 2778
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)