Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_D01
(679 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51621| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 9e-37
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 31 1.1
SB_21462| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 30 2.0
SB_51789| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_2536| Best HMM Match : Arfaptin (HMM E-Value=0.93) 29 3.5
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 4.6
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 28 6.0
SB_17310| Best HMM Match : Filament (HMM E-Value=0.31) 28 8.0
SB_3220| Best HMM Match : Ion_trans (HMM E-Value=5.6e-22) 28 8.0
>SB_51621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 150 bits (364), Expect = 9e-37
Identities = 69/124 (55%), Positives = 89/124 (71%), Gaps = 2/124 (1%)
Frame = +1
Query: 97 ESNIPIDINIGKLQDWLISRRHVSKDWQKNVIAVREKINNAIQDMPAHQDIAALLSGSYI 276
E +PIDI KL DWL+ RRH WQ + +REKIN AIQDMP ++I LLSG++I
Sbjct: 11 EELLPIDIYYNKLLDWLLDRRHCDVKWQAAALDIREKINAAIQDMPPVEEITTLLSGTFI 70
Query: 277 NYFHCLKIIEILKETEADTKNLFGRYGSQRMKDWQDVERNYEKENLYLAE--AAQMLVRN 450
NYFHCL+I+E+LK +E+ TKN+FG Y S+RMKDWQ++ R YEK+N+YL E Q +V
Sbjct: 71 NYFHCLRIVELLKVSESGTKNIFGGYSSKRMKDWQEIIRLYEKDNVYLGEFDECQDIVNT 130
Query: 451 ISYE 462
IS E
Sbjct: 131 ISME 134
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +2
Query: 467 QGLKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGI-------QXEKIKREL 625
Q + I+ E A + +K +Y N A K ++ +CK++GI + E IK EL
Sbjct: 125 QDIVNTISMEPFAIQECTRKENEYTTNAAEYKEQYRKVCKKMGIKFSMTSLKGESIKTEL 184
Query: 626 XAKLQELPEIYDQIGKS 676
L+ELP++Y + +S
Sbjct: 185 LHLLKELPDVYQTVSES 201
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 461 RFQGLKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQXEKIKRELXAKLQ 640
+ Q LK+Q KEE+ + D +N + K E+L K+L EK KRE K +
Sbjct: 861 KMQELKKQKQKEEEEKQDKTLSSKKSFENWKAKKDEYLK--KEL---KEKKKREKTEKEK 915
Query: 641 ELPEIYDQIGKS 676
+ E Y++ KS
Sbjct: 916 QEEEKYEKTIKS 927
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 458 MRFQGLKRQIAKEEQAQADFEKKHADYLKNEASS-KSEFLALCKQLGIQXEKIKRELXAK 634
+R ++++I + E DF+K+H+ LKNE K + LA ++ EK++ ++ +
Sbjct: 241 VRLGEMQQKIRRLEALCQDFKKEHSS-LKNERDHWKDQALANKNEI----EKLRGDISKQ 295
Query: 635 LQELPEIYDQIGKS 676
+ EI ++GK+
Sbjct: 296 FSDADEIQSELGKT 309
>SB_21462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 386 TSCQSFILCDPYLPNKFLVSASVSFSISMIF 294
+SC SF + P+ PN+ + + S SI +IF
Sbjct: 57 SSCASFSILSPFFPNEAAIKGADSASIGIIF 87
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 473 LKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQXEKIKRELXAKLQELPE 652
LK + AKE + +F K LKNE S+K + K++ + EK + L K +L +
Sbjct: 396 LKVKDAKEHFEKCEFLTKEMHRLKNEWSNKEKEY---KRMATEQEKESKSLRKKNNQLED 452
Query: 653 IYDQIGKS 676
GKS
Sbjct: 453 ELTNQGKS 460
>SB_51789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +2
Query: 467 QGLKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQXEKIKRELXAKLQEL 646
Q LK+Q KEE+ + D +N + K E+L K+L EK KRE K ++
Sbjct: 2 QELKKQKQKEEEEKQDKTLSSKKSFENWKAKKDEYLK--KEL---KEKKKREKTEKEKQE 56
Query: 647 PEIYDQIGKS 676
E Y++ KS
Sbjct: 57 EEKYEKTIKS 66
>SB_2536| Best HMM Match : Arfaptin (HMM E-Value=0.93)
Length = 190
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 277 NYFHCLKIIEILK--ETEADTKNLFGRYGSQRMKDWQDVERNYEKENLY 417
NY CL+ +EIL+ E+E D+K L + +R + D E + E+E LY
Sbjct: 133 NYESCLENLEILEKDESEVDSKRL--KIAKKRFRS-ADEELSSEEEKLY 178
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 491 KEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQXEKIKRELXAKLQELPEIYDQIG 670
K E+ QAD + + +N ++ + A + Q E +KRE + E+ ++ DQ+G
Sbjct: 1495 KLEEVQADLDNSQKE-ARNYSTEMYKIKAAFDEQSEQVEALKRENKSLASEVNDLADQLG 1553
Query: 671 K 673
+
Sbjct: 1554 E 1554
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 464 FQGLKRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALCKQLGIQXEKIKRELXAKLQE 643
F ++ + E +AD +K+ + S K+++ + E KR+L AKLQE
Sbjct: 1376 FDAMQENFDEAEDGKADLQKQLSRANTEAQSWKNKYEQDALAKVEELEDAKRKLAAKLQE 1435
Query: 644 LPE 652
+ E
Sbjct: 1436 MEE 1438
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 464 FQGLKRQIAKEEQAQADFEKKHADYLKNEA-SSKSEFLALCKQLGIQXEKIKREL 625
++ L ++ + E + EKK + LKN+A SS E+ CK+L + E+ K +
Sbjct: 344 YERLSEELGERENLLKESEKKRNE-LKNKALSSLKEYRVKCKKLEREAEQGKEAM 397
>SB_17310| Best HMM Match : Filament (HMM E-Value=0.31)
Length = 458
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 500 QAQADFEKKHADYLKNEASSKSEFLALCKQLGIQXEKIKRELXAKLQELPEIYDQIGK 673
QA+AD E A +K +A++ S A KQ + KRE + + E D+IGK
Sbjct: 314 QAEADLEAT-ATAVKQDAAALSVRQAQMKQQEESLARDKREFERRKEAFEEEKDRIGK 370
>SB_3220| Best HMM Match : Ion_trans (HMM E-Value=5.6e-22)
Length = 256
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 476 KRQIAKEEQAQADFEKKHADYLKNEASSKSEFLALC 583
+ Q+ KEE+A+ EK+ + +NE S K + +C
Sbjct: 204 EEQLRKEEEARRQQEKERREAKENELSPKPRGILVC 239
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,115,946
Number of Sequences: 59808
Number of extensions: 321768
Number of successful extensions: 925
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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