Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_D01
         (679 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   2.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   4.7  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   8.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   8.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   8.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   8.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.2  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
 Frame = +1

Query: 367 MKDWQDVERNYEKEN-----LYLAEAAQMLVRNISY 459
           +K+W+D   NY +EN     + L EA   L   + Y
Sbjct: 275 VKEWRDFVDNYAEENKRDEIVLLTEAYSSLENTLKY 310


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 340 LFGRYGSQRMKDWQDVERNYEKEN 411
           L+ R       +W DV RNY+ E+
Sbjct: 44  LYVRQADLSDAEWYDVGRNYDMES 67



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 61  KFKALFNLTNMDESN 105
           ++K  F L++MDESN
Sbjct: 617 RYKMFFFLSSMDESN 631


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 340 LFGRYGSQRMKDWQDVERNYEKEN 411
           L+ R       +W DV RNY+ E+
Sbjct: 44  LYVRQADLSDAEWYDVGRNYDMES 67



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 61  KFKALFNLTNMDESN 105
           ++K  F L++MDESN
Sbjct: 617 RYKMFFFLSSMDESN 631


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 575 ALCKQLGIQ-XEKIKRELXAKLQELPE 652
           ALCK+LGI   +K+   L  KL E+ E
Sbjct: 133 ALCKELGISVVQKVSHTLY-KLDEIIE 158


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 533 LHASFQNPLVPV 498
           +H  F++PL+PV
Sbjct: 151 MHGDFKDPLIPV 162


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 533 LHASFQNPLVPV 498
           +H  F++PL+PV
Sbjct: 151 MHGDFKDPLIPV 162


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 533 LHASFQNPLVPV 498
           +H  F++PL+PV
Sbjct: 202 MHGDFKDPLIPV 213


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 533 LHASFQNPLVPV 498
           +H  F++PL+PV
Sbjct: 151 MHGDFKDPLIPV 162


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 518 QNPLVPVPLWQSASSXPGIS*LIFLTSI 435
           QN      LW  A+   G++ L+FL S+
Sbjct: 30  QNRSQEEDLWNLATDRAGLAILLFLFSV 57


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 358 SQRMKDWQDVERNYEKENL 414
           SQ  K W  V  NY+  NL
Sbjct: 437 SQTNKTWLPVNENYKSLNL 455


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,303
Number of Sequences: 438
Number of extensions: 2790
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)