Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_C24
         (531 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5E801 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_Q22E41 Cluster: Neurohypophysial hormones, N-terminal D...    32   7.2  
UniRef50_A7TS91 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  

>UniRef50_A5E801 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 672

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +2

Query: 158 NQKTSSILISLMTYYIILCLITYNKWSHTQ*KNVIIIRF 274
           NQ+ S I+++LM   + +CLITY    HT  +N +II F
Sbjct: 217 NQQVSFIVVALMAVTLGICLITYLDLPHT--RNSLIISF 253


>UniRef50_Q22E41 Cluster: Neurohypophysial hormones, N-terminal
           Domain containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Neurohypophysial hormones, N-terminal Domain
           containing protein - Tetrahymena thermophila SB210
          Length = 6552

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 203 YNMSLMILECCWFFGYDFDNGCFRDXC 123
           YN S +   C  F+GYD + GCFRD C
Sbjct: 280 YNQSFV---CKNFYGYDSNYGCFRDFC 303


>UniRef50_A7TS91 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 358

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +2

Query: 116 LLNXNPESNRYRNRNQKTSSILISLMTYYIILCLITYNKWSHTQ*KNVIIIRFFYFPK 289
           LL   P S+ Y  + QK   ++ S  T+Y  L    +N WS    KN+ + +   FPK
Sbjct: 238 LLRSYPHSSHYHTKFQKFFMLIQSCYTFYWDL----FNDWSLNSIKNIRVGKSVTFPK 291


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,218,225
Number of Sequences: 1657284
Number of extensions: 6726268
Number of successful extensions: 14016
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14016
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)