Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_C23
(791 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 2.1
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 23 3.7
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 23 3.7
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 3.7
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 22 4.9
AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450 ... 22 6.5
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 22 6.5
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 6.5
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 22 6.5
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 22 6.5
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 21 8.5
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 21 8.5
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/50 (24%), Positives = 20/50 (40%)
Frame = -1
Query: 338 CGPWRQKPLSYIDRLSCRVLEASACKPQYDRLEHVYRGIGLRYHSRQAEN 189
CG W++ P Y R + + D+ E G ++Y + EN
Sbjct: 229 CGVWKRIPHDYRKRFRMEKIYVALVWGVKDQAEFTLSGQVMKYAALATEN 278
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 149 PGMDKSTAAVCEFYSQPGGCGNGAQCPYR 235
P D + + + G CGNG C +R
Sbjct: 353 PPQDDAGNLISPSINDDGTCGNGYVCEHR 381
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 149 PGMDKSTAAVCEFYSQPGGCGNGAQCPYR 235
P D + + + G CGNG C +R
Sbjct: 354 PPQDDAGNLISPSINDDGTCGNGYGCEHR 382
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 3.7
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +3
Query: 117 HRNMGRYRYHSQEWTNLQQR 176
+R MG Y Y +W + R
Sbjct: 1698 NRRMGPYAYKGDQWVSFDDR 1717
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 149 PGMDKSTAAVCEFYSQPGGCGNGAQCPYR 235
P D + + + G CGNG C +R
Sbjct: 354 PPQDGAGNLISPSINDDGTCGNGYVCEHR 382
>AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 463
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 314 LSYIDRLSCRVLEASACKPQYDRL 243
+ Y+D++ C L PQ DRL
Sbjct: 328 MKYLDQVVCESLRLWPPAPQTDRL 351
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 206 CGNGAQCPYRHVRGDRTVVCKHWLRGLCKKGD 301
C + Q YR G+R CK R KG+
Sbjct: 146 CKSALQMHYRTHTGERPFKCKICGRAFTTKGN 177
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 123 NMGRYRYHSQEWTNLQQRYVNF 188
++G Y +HSQ T Y N+
Sbjct: 4 DVGMYGHHSQHGTYPSDNYYNY 25
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 123 NMGRYRYHSQEWTNLQQRYVNF 188
++G Y +HSQ T Y N+
Sbjct: 4 DVGMYGHHSQHGTYPSDNYYNY 25
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 123 NMGRYRYHSQEWTNLQQRYVNF 188
++G Y +HSQ T Y N+
Sbjct: 4 DVGMYGHHSQHGTYPSDNYYNY 25
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 425 CINLHEAPSGQKPAK 381
C NLH+A + PAK
Sbjct: 240 CNNLHKALESRNPAK 254
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 425 CINLHEAPSGQKPAK 381
C NLH+A + PAK
Sbjct: 240 CNNLHKALESRNPAK 254
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,765
Number of Sequences: 336
Number of extensions: 4579
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -