Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_C19
(802 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 34 0.020
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 29 1.0
SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 1.8
SPAPB18E9.01 |trm5||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 27 3.1
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 27 4.1
SPBC2F12.10 |||mitochondrial ribosomal protein subunit L35|Schiz... 26 5.4
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 26 7.2
SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2 |Schizosacc... 25 9.5
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 25 9.5
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 9.5
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 25 9.5
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 34.3 bits (75), Expect = 0.020
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 186 CYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFK 311
CY +Y E +K NDD + FD AK LK FK
Sbjct: 522 CYALASDQYPELPVIKAYQGCNDDWNIMDHFDFAKPELKMFK 563
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 28.7 bits (61), Expect = 1.0
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +3
Query: 201 ESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTSNGQVKTLSDLPLIEGFTD 380
+S SES + L+V + +T+S F +A+ K WKTSNG + D+ E F
Sbjct: 63 DSGVSESWVLDFLSVTGE--KTISEF-LAQ------KIWKTSNGDLNVAVDMYFDESFNI 113
Query: 381 KTAKKLCDS--ILNGPTEEVEQISNKIKGQILHPN 479
K + +S + +++Q+SN + + L N
Sbjct: 114 KNSNPDSESQKDTDASLTQMDQLSNTVSVKDLSIN 148
>SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 481
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 297 ILTLLYQTLTMFENHH*LHLVFSLFDFPSIYFPSFDNNXANHLLTYSSKXF 145
I T ++ +FE HH L + ++FD+ P N +L+ S K F
Sbjct: 286 IYTTVWLLQRLFEAHHSLDPLLTIFDYYLSVSPKDITRLTNAILSLSMKQF 336
>SPAPB18E9.01 |trm5||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 435
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +3
Query: 387 AKKLCDSILNGPTEEVEQISNKIKGQILHPNLKESTIKDCKTVLTVYISVNSVCWTLINK 566
A + D+IL +E G I H NL+E + + V + N T++NK
Sbjct: 122 ADDILDAILPPGEKEDHPSGFTAVGHIAHMNLREEWLPYKYIIGKVILDKNPSIETVVNK 181
Query: 567 NDYEVVEWQYYSIDYPEGK 623
D +++ + ++ GK
Sbjct: 182 TDTIDTKFRTFQMEVLAGK 200
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 225 KVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTS 326
K + ++INDDS+ +++ ++K + + K+ +TS
Sbjct: 196 KGTVTSIINDDSRNINKKTLSKQPVSEHKEKQTS 229
>SPBC2F12.10 |||mitochondrial ribosomal protein subunit
L35|Schizosaccharomyces pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 348 SDLPLIEGFTDKTAKKLCDSILNGPTEEVEQISN-KIKGQILHPNLK 485
S + LI+ +++K KKL +L P+E +I ++ QI P ++
Sbjct: 93 SSVKLIQEYSEKVHKKLQAKLLENPSETSPEIERLQVLSQINLPEVR 139
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 25.8 bits (54), Expect = 7.2
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +3
Query: 534 VNSVCWTLINKNDYEVVEWQYYSIDYPEG 620
+ VC+ +N+++++ + + YS D P+G
Sbjct: 95 IMEVCFYSVNRSNWDHIRQENYSPDIPDG 123
>SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 849
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 186 CYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKF 308
CYQN + YS+ Q ++ + D L +D+ S K F
Sbjct: 697 CYQNANTTYSKFQSLECQTNLED---MLKHYDVEISPAKSF 734
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.4 bits (53), Expect = 9.5
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +3
Query: 153 LNCRSISGSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTSNG 332
L C I G C S YS QK+ IL+ I S S+F+ + Q N
Sbjct: 583 LTCLDICGPVICTNLFVSDYSMRQKILILSCI---SLAASKFNDDDNERLFPSQLLPGNL 639
Query: 333 QVKTLSDLPLIEGFTDKTAKKLCDSILN 416
+ S P IE +D+ +KL +++
Sbjct: 640 HDQFYS--PTIEKISDELERKLVFPVMS 665
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +3
Query: 147 NXLNCRSISGSRCCYQNLESKYSESQKVKILNVINDDSQTLSRFDIAKSR 296
N NC +IS + SK++ S I N++ + + LS +S+
Sbjct: 730 NTFNCPAISYFETSFDECFSKFASSDNYIIGNLLKTNQEDLSNLPTFRSQ 779
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 435 EQISNKIKGQILHPNLKESTIKDCKT--VLTVYISVNSVCWTLINKNDYEVVEWQYY 599
+++ ++ G ++H NL K K+ + +V +S + W + N D +V W Y
Sbjct: 317 KKLRKRLNGDVVH-NLDVPHDKSYKSNYLFSVVLSPHQASWNIYNSFDNSMVLWCPY 372
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,854,035
Number of Sequences: 5004
Number of extensions: 54190
Number of successful extensions: 146
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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