Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_C19
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016685-3|AAG24145.2| 422|Caenorhabditis elegans Hypothetical ... 32 0.42
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical pr... 30 1.7
U64603-4|AAO61442.1| 410|Caenorhabditis elegans Serotonin/octop... 30 2.2
U64603-3|AAM15552.1| 422|Caenorhabditis elegans Serotonin/octop... 30 2.2
U64603-2|AAB04582.3| 435|Caenorhabditis elegans Serotonin/octop... 30 2.2
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 29 3.9
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 29 3.9
Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical pr... 29 5.1
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 8.9
>AF016685-3|AAG24145.2| 422|Caenorhabditis elegans Hypothetical
protein F59E11.11 protein.
Length = 422
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 393 KLCDSILNGPTEEVEQISNKIKGQILHPNLKESTIKDCKTVLTVYISVNSVCWTLINK 566
KL +L G EEV Q + LH + K+ + LT +S+N+ +L+NK
Sbjct: 337 KLTGKMLGGDVEEVTQKLQDVLANDLHEHYKDQEVSRYAHRLTKLLSINNDWQSLLNK 394
>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
protein C28A5.2 protein.
Length = 1218
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 519 TVYISVNSVCWTLINKNDYEVVEWQYYSIDYPEGKKIQITDIFDIAWRITQRLPVADIYV 698
T +I VCW I+ + V W+YY+ D+P IT IF++ +R T +A+ V
Sbjct: 145 TPFIYRIGVCWEPISFENGVTVNWRYYA-DFP------ITPIFELYYRETTLPYIAESMV 197
>Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical
protein C28A5.1 protein.
Length = 1223
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 519 TVYISVNSVCWTLINKNDYEVVEWQYYSIDYPEGKKIQITDIFDIAWRITQRLPVADIYV 698
T +I VCW I+ + V W+YY+ D+P IT IF++ +R T +A+ V
Sbjct: 145 TPFIYRIGVCWEPISFENGVTVNWRYYA-DFP------ITPIFELYYRETTLPYIAESMV 197
>U64603-4|AAO61442.1| 410|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform c
protein.
Length = 410
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = -3
Query: 683 DR*PLRYTPCNIKYICDLNLLSFGVINTIILPLHNFIII-----FVYKRPTN*INRYIYC 519
D+ PL T C++ DL L + ++N + + +++I + KR T I YI C
Sbjct: 105 DKWPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIAC 164
>U64603-3|AAM15552.1| 422|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform b
protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = -3
Query: 683 DR*PLRYTPCNIKYICDLNLLSFGVINTIILPLHNFIII-----FVYKRPTN*INRYIYC 519
D+ PL T C++ DL L + ++N + + +++I + KR T I YI C
Sbjct: 105 DKWPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIAC 164
>U64603-2|AAB04582.3| 435|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform a
protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = -3
Query: 683 DR*PLRYTPCNIKYICDLNLLSFGVINTIILPLHNFIII-----FVYKRPTN*INRYIYC 519
D+ PL T C++ DL L + ++N + + +++I + KR T I YI C
Sbjct: 105 DKWPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIAC 164
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 378 DKTAKKLCDSILNGPTEEVEQISNKIKGQILHPNLKESTIKDCKTVLTVYISVNSVCWTL 557
D+ AK +C+ I NG EEV+ + + +G + EST+ + +V +T
Sbjct: 132 DRIAKLICEQIGNGTYEEVKSLPSTNRGAGGFGSTGESTMNSETANPATNLERITVRFTQ 191
Query: 558 INKN 569
+N+N
Sbjct: 192 LNEN 195
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 378 DKTAKKLCDSILNGPTEEVEQISNKIKGQILHPNLKESTIKDCKTVLTVYISVNSVCWTL 557
D+ AK +C+ I NG EEV+ + + +G + EST+ + +V +T
Sbjct: 132 DRIAKLICEQIGNGTYEEVKSLPSTNRGAGGFGSTGESTMNSETANPATNLERITVRFTQ 191
Query: 558 INKN 569
+N+N
Sbjct: 192 LNEN 195
>Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical
protein F38E11.4 protein.
Length = 751
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 378 DKTAKKLCDSILNGPTEEVEQISNKIKGQILHPNLKESTIKDCKTVLTVYISVN-SVCWT 554
DKT + CD ++ + K++G + + +++ + V TV + S+ WT
Sbjct: 600 DKTFQVSCDFSKIADKNQLAALKPKVEGDVKSEKVLMEIVRNGQAVTTVPLGAEVSLRWT 659
Query: 555 LINKND 572
+I++ D
Sbjct: 660 VIDETD 665
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 195 NLESKYSESQKVKILNVINDDSQTLSRFDIAKSRLKKFKQWKTSNGQVKTLSD 353
N E+ S+ + DD+ T+S + S +FK +T+ G T+S+
Sbjct: 240 NSETTESDGTTTTVFTTTKDDTSTVSGDSNSGSSTSEFKNTETTTGPGSTVSE 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,582,443
Number of Sequences: 27780
Number of extensions: 293329
Number of successful extensions: 801
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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