Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_C19
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.4  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            23   4.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   7.6  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 537 NSVCWTLINKNDYEVVEWQYYSIDYPEGK 623
           ++ CW      +YE V  +Y  +D   GK
Sbjct: 464 DTCCWVCDQCEEYEYVHDEYTCMDCGPGK 492


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 561 NKNDYEVVEWQYYSIDYPEGKKI 629
           NK+   +V+  ++ +DY  G+KI
Sbjct: 18  NKDGARIVKASHFELDYMLGRKI 40


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 711  LQLSSHKCQRPVTAALYAMQYQIYL*SES 625
            LQLS H     +   L    YQ+YL S +
Sbjct: 1451 LQLSRHATSHELKGLLCGNTYQLYLTSHN 1479


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 711  LQLSSHKCQRPVTAALYAMQYQIYL*SES 625
            LQLS H     +   L    YQ+YL S +
Sbjct: 1447 LQLSRHATSHELKGLLCGNTYQLYLTSHN 1475


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 537 NSVCWTLINKNDYEVVEWQYYSIDYPEGK 623
           ++ CW      +YE V  +Y  +D   GK
Sbjct: 554 DTCCWVCDQCEEYEYVYDEYTCMDCGPGK 582


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,899
Number of Sequences: 438
Number of extensions: 3475
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)