Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_C14
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061413-1|AAL28961.1|  306|Drosophila melanogaster LD34436p pro...   289   4e-78
AE014297-784|AAF54266.1|  306|Drosophila melanogaster CG8039-PA ...   289   4e-78
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    29   7.9  

>AY061413-1|AAL28961.1|  306|Drosophila melanogaster LD34436p
           protein.
          Length = 306

 Score =  289 bits (708), Expect = 4e-78
 Identities = 137/227 (60%), Positives = 165/227 (72%)
 Frame = +2

Query: 155 VAKWLTRRDCRTLSSLPEKAKLASLEVTEKAETSRRRPKKVNPLLENRHAYPEFLPDPNP 334
           V K +     +T   + E  +    E      TS    K + P    R  YPEFLPDP  
Sbjct: 17  VYKRIVTFSTKTAEHVIENQEEQKKEAPPTTPTSPVNRKTIIPA-NYRFVYPEFLPDPKV 75

Query: 335 KWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCG 514
           +WRN +REKLER DML RR QID+PEFYVGS+LAVT +DPH+ GKT+RFVGICI R  CG
Sbjct: 76  EWRNLVREKLERLDMLDRRKQIDLPEFYVGSVLAVTSSDPHAAGKTSRFVGICINRDRCG 135

Query: 515 LRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDM 694
           LRA F LRNV+DHQG+EV Y+LYDPTI KI+VLR+EKRLDD LFYLRDALPEYSTF  +M
Sbjct: 136 LRARFILRNVIDHQGMEVVYELYDPTILKIEVLRLEKRLDDSLFYLRDALPEYSTFDENM 195

Query: 695 DPEILPEGTPVPINPVKVELKPKPWLERWERQXLQGISNIEQYLTKK 835
           + E L EG PVP+N +KV L+P+PWLERWERQ L+G++NI++YL  K
Sbjct: 196 EAEPLEEGAPVPVNDIKVVLRPRPWLERWERQNLRGVANIDEYLKDK 242


>AE014297-784|AAF54266.1|  306|Drosophila melanogaster CG8039-PA
           protein.
          Length = 306

 Score =  289 bits (708), Expect = 4e-78
 Identities = 137/227 (60%), Positives = 165/227 (72%)
 Frame = +2

Query: 155 VAKWLTRRDCRTLSSLPEKAKLASLEVTEKAETSRRRPKKVNPLLENRHAYPEFLPDPNP 334
           V K +     +T   + E  +    E      TS    K + P    R  YPEFLPDP  
Sbjct: 17  VYKRIVTFSTKTAEHVIENQEEQKKEAPPTTPTSPVNRKTIIPA-NYRFVYPEFLPDPKV 75

Query: 335 KWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFVGICIERKGCG 514
           +WRN +REKLER DML RR QID+PEFYVGS+LAVT +DPH+ GKT+RFVGICI R  CG
Sbjct: 76  EWRNLVREKLERLDMLDRRKQIDLPEFYVGSVLAVTSSDPHAAGKTSRFVGICINRDRCG 135

Query: 515 LRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDM 694
           LRA F LRNV+DHQG+EV Y+LYDPTI KI+VLR+EKRLDD LFYLRDALPEYSTF  +M
Sbjct: 136 LRARFILRNVIDHQGMEVVYELYDPTILKIEVLRLEKRLDDSLFYLRDALPEYSTFDENM 195

Query: 695 DPEILPEGTPVPINPVKVELKPKPWLERWERQXLQGISNIEQYLTKK 835
           + E L EG PVP+N +KV L+P+PWLERWERQ L+G++NI++YL  K
Sbjct: 196 EAEPLEEGAPVPVNDIKVVLRPRPWLERWERQNLRGVANIDEYLKDK 242


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 674  STFSFDMDPEILPEGTPVPINPVKVELKPKP 766
            ST S D  PE +PE  PV   P  +E KP+P
Sbjct: 3835 STTSEDEQPETVPE--PVEAMPAPIESKPEP 3863


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,617,583
Number of Sequences: 53049
Number of extensions: 727027
Number of successful extensions: 1919
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1919
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)