Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_C12
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 48 1e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 46 3e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 45 7e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 39 0.004
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 39 0.004
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 37 0.014
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 37 0.014
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 37 0.014
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 37 0.014
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 37 0.014
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 37 0.014
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 37 0.014
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 37 0.018
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 37 0.018
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 37 0.018
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 36 0.024
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 36 0.024
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 36 0.024
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 36 0.032
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 36 0.032
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 36 0.042
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.096
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.096
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 34 0.13
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.17
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 33 0.22
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.22
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 33 0.22
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.29
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.29
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.29
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.29
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.29
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.29
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.29
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 32 0.51
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 32 0.51
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 32 0.51
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 32 0.51
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 30 1.6
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 30 2.1
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 30 2.1
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 30 2.1
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 30 2.1
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 30 2.1
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 29 2.7
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 29 2.7
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 28 8.4
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 28 8.4
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 28 8.4
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 28 8.4
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNGG 319
+FVG+LP L+++F+ F VTECDI+ FVH++ E+ I L T +G
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTIDGK 63
Query: 320 VISVE 334
V++++
Sbjct: 64 VVNIK 68
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNGG 319
+FVG+LP L+++F+ F VTECDI+ FVH++ E+ I L T +G
Sbjct: 5 LFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTIDGK 63
Query: 320 VISVE 334
V++++
Sbjct: 64 VVNIK 68
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRAL 295
T V+V + E L KLF +FG +T C++M GFV E+A A++AL
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 296 HNSTFNG 316
H+ST G
Sbjct: 213 HDSTIEG 219
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRAL 295
T V+V + E L KLF +FG +T C++M GFV E+A A++AL
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 209
Query: 296 HNSTFNG 316
H+ST G
Sbjct: 210 HDSTIEG 216
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRAL 295
T V+V + E L KLF +FG +T C++M GFV E+A A++AL
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 296 HNSTFNG 316
H+ST G
Sbjct: 273 HDSTIEG 279
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRAL 295
T V+V + E L K+F +FG +T C++M GFV E+A A++AL
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 296 HNSTFNG 316
H+ST G
Sbjct: 273 HDSTIEG 279
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +2
Query: 146 VGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRALHNST 307
V ++P + DL+ +FE+FGVV++ +I+ GFV M+ + A A + LH S
Sbjct: 157 VSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSM 216
Query: 308 FNGGVISV 331
G I V
Sbjct: 217 IEGRKIEV 224
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +2
Query: 146 VGSLPQGSKPEDLRKLFERFGVVTECDIM------NRCGFVHMQTEEQAAAAIRALHNST 307
V ++P + DL+ +FE+FGVV++ +I+ GFV M+ + A A + LH S
Sbjct: 157 VSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSM 216
Query: 308 FNGGVISV 331
G I V
Sbjct: 217 IEGRKIEV 224
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRAL 295
+FVG +P+ D R+LFE++G V C+I+ C FV + A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 296 HN 301
HN
Sbjct: 117 HN 118
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIRALH 298
+F+G L + E+LR++F +FG + +C ++ C FV A A + +H
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 299 NS 304
+S
Sbjct: 204 HS 205
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRAL 295
+FVG +P+ D R+LFE++G V C+I+ C FV + A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 296 HN 301
HN
Sbjct: 117 HN 118
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIRALH 298
+F+G L + E+LR++F +FG + +C ++ C FV A A + +H
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 299 NS 304
+S
Sbjct: 204 HS 205
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRAL 295
+FVG +P+ D R+LFE++G V C+I+ C FV + A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 296 HN 301
HN
Sbjct: 117 HN 118
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIRALH 298
+F+G L + E+LR++F +FG + +C ++ C FV A A + +H
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 299 NS 304
+S
Sbjct: 204 HS 205
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRAL 295
+FVG +P+ D R+LFE++G V C+I+ C FV + A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 296 HN 301
HN
Sbjct: 117 HN 118
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIRALH 298
+F+G L + E+LR++F +FG + +C ++ C FV A A + +H
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 299 NS 304
+S
Sbjct: 204 HS 205
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRAL 295
+FVG +P+ D R+LFE++G V C+I+ C FV + A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 296 HN 301
HN
Sbjct: 117 HN 118
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIRALH 298
+F+G L + E+LR++F +FG + +C ++ C FV A A + +H
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 299 NS 304
+S
Sbjct: 204 HS 205
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRAL 295
+FVG +P+ D R+LFE++G V C+I+ C FV + A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 296 HN 301
HN
Sbjct: 117 HN 118
Score = 31.5 bits (68), Expect = 0.68
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM 232
+F+G L + E+LR++F +FG + +C ++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVL 174
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRAL 295
+FVG +P+ D R+LFE++G V C+I+ C FV + A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 296 HN 301
HN
Sbjct: 117 HN 118
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM-------NRCGFVHMQTEEQAAAAIRALH 298
+F+G L + E+LR++F +FG + +C ++ C FV A A + +H
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 299 NS 304
+S
Sbjct: 204 HS 205
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--NRCGFVHMQTEEQAAAAIRALHNST 307
T V+VG++ Q + DLR LF +G + E I R FV + +E A AI ++
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKE 296
Query: 308 FNGGVI 325
G +
Sbjct: 297 MAGNQV 302
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR-CGFVHMQTEEQAAAAIRALHNSTFNG 316
+FVG+LP K +L++LF G + EC + + F+ + T A +A A+ +G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIHG 177
Query: 317 GVISV 331
+ V
Sbjct: 178 RQVRV 182
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR-CGFVHMQTEEQAAAAIRALHNSTFNG 316
+FVG+LP K +L++LF G + EC + + F+ + T A +A A+ +G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIHG 177
Query: 317 GVISV 331
+ V
Sbjct: 178 RQVRV 182
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR---CGFVHMQTEEQAAAAIRALHNSTF 310
V+VG LP + ++L ++F+RFG + + + R FV A A+RAL S
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRI 64
Query: 311 NGGVISVE 334
G VE
Sbjct: 65 CGVRARVE 72
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR---CGFVHMQTEEQAAAAIRALHNSTF 310
V+VG LP + ++L ++F+RFG + + + R FV A A+RAL S
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRI 64
Query: 311 NGGVISVE 334
G VE
Sbjct: 65 CGVRARVE 72
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR---CGFVHMQTEEQAAAAIRALHNSTF 310
V+VG LP + ++L ++F+RFG + + + R FV A A+RAL S
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRI 64
Query: 311 NGGVISVE 334
G VE
Sbjct: 65 CGVRARVE 72
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG----FVHMQTEEQAAAAIRALHNST 307
V+VG+LP + +++ +F ++G + DI + G FV + A A+RA
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYE 70
Query: 308 FNGGVISVE 334
F+G I VE
Sbjct: 71 FDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG----FVHMQTEEQAAAAIRALHNST 307
V+VG+LP + +++ +F ++G + DI + G FV + A A+RA
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYE 70
Query: 308 FNGGVISVE 334
F+G I VE
Sbjct: 71 FDGRRIRVE 79
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNGG 319
V++G LP + D+ F +G +++ + N GFV Q + A A+ L+ G
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCGE 63
Query: 320 VISVE 334
+ +E
Sbjct: 64 RVILE 68
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM 232
+FVG +P+ + +DLR LFE+FG + E I+
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTIL 61
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM 232
+FVG +P+ + +DLR LFE+FG + E I+
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTIL 61
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM-----NRC-GF--VHMQTEEQAAAAIRAL 295
+F+ +LP +K +DL+ LF+++G V+E ++ C GF V E A AA AL
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 296 HNSTFNGGVISV 331
F G ++ +
Sbjct: 341 DGYVFKGRMMHI 352
Score = 32.3 bits (70), Expect = 0.39
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG---FVHMQTEEQAAAAIRALHNS 304
T + +LP G + E+L+++FE+FG T+ + G V M A A RAL S
Sbjct: 483 TVMLAKNLPAGVESEELQRMFEKFGDCTKVLMPTEGGVSALVIMGNPVDAKKAFRALAYS 542
Query: 305 TFNGGVISVE 334
F + +E
Sbjct: 543 RFRSQPLYLE 552
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDI-------MNRCGFVHMQTEEQAAAAIRA 292
T + V +LP + LRK FE++G +++ + FV E A+ A+
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 293 LHNSTFNGGVISVE 334
+ + FN ++VE
Sbjct: 63 SNQTFFNSKKLTVE 76
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 125 VPQTXVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC---GFVHMQTEEQAAAAIRAL 295
+P +F ++P+G++PE ++ +F +F + E M F+ ++E+ + A +AL
Sbjct: 140 LPNNILFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQAL 199
Query: 296 HN 301
N
Sbjct: 200 DN 201
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMN------RCGFVHMQTEEQAAAA 283
+FVG++P K ++R +FE G V E DI FV QT +QA A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMN------RCGFVHMQTEEQAAAA 283
+FVG++P K ++R +FE G V E DI FV QT +QA A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMN------RCGFVHMQTEEQAAAA 283
+FVG++P K ++R +FE G V E DI FV QT +QA A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 201
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR------CGFVHMQTEEQAAAAIRALHN 301
++V ++P + +DL +F +G V +I+ GFV + + E A ALH
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALHE 112
Query: 302 STFNGGVISV 331
S G +I V
Sbjct: 113 SHVQGRIIEV 122
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG--FVHMQTEEQAAAAIRALHNST 307
T V+VG++ ++ E +R+ F FG +TE I G FV ++ AA AI ++N
Sbjct: 128 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD 186
Query: 308 FNGGVI 325
G ++
Sbjct: 187 VGGQLV 192
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG--FVHMQTEEQAAAAIRALHNST 307
T V+VG++ ++ E +R+ F FG +TE I G FV ++ AA AI ++N
Sbjct: 138 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD 196
Query: 308 FNGGVI 325
G ++
Sbjct: 197 VGGQLV 202
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG--FVHMQTEEQAAAAIRALHNST 307
T V+VG++ ++ E +R+ F FG +TE I G FV ++ AA AI ++N
Sbjct: 241 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD 299
Query: 308 FNGGVI 325
G ++
Sbjct: 300 VGGQLV 305
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCG--FVHMQTEEQAAAAIRALHNST 307
T V+VG++ ++ E +R+ F FG +TE I G FV ++ AA AI ++N
Sbjct: 209 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQD 267
Query: 308 FNGGVI 325
G ++
Sbjct: 268 VGGQLV 273
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAA 277
+FVG+LP K +L++LF G + EC + + GF ++ AA
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGK-GFAFLRLISNAA 162
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNR------CGFVHMQTEEQAAAAIRALHN 301
++V ++P + +DL +F +G V +I+ GFV + + E A ALH
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALHE 112
Query: 302 STFNGGVISV 331
S G +I V
Sbjct: 113 SHVQGRIIEV 122
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.39
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 128 PQTXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAA 283
P + V +L + +DLR +F FG + +CD++ GF++ E A AA
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 284 IRALHNSTFNGGVISVE 334
L N+ +G I V+
Sbjct: 134 RDKLCNTDLDGHKIRVD 150
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM 232
+F+G L + E+LR F RFG V EC +M
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVM 77
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRAL 295
VF+G L S ED+++ FE +G V + +M GFV ++E A + +
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDE-VADKVCEI 194
Query: 296 HNSTFNGGVI 325
H NG ++
Sbjct: 195 HFHEINGKMV 204
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECD 226
VFVG LP +DLR FE+FG V + +
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIE 140
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECD 226
VFVG LP +DLR FE+FG V + +
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIE 140
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM 232
+F+G L + E+LR F RFG V EC +M
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVM 77
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIM--------NRCGFVHMQTEEQAAAAIRAL 295
VF+G L S ED+++ FE +G V + +M GFV ++E A + +
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDE-VADKVCEI 194
Query: 296 HNSTFNGGVI 325
H NG ++
Sbjct: 195 HFHEINGKMV 204
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 128 PQTXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 232
P+ +FV L + EDL +F RFG + C+I+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIV 273
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 128 PQTXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 232
P+ +FV L + EDL +F RFG + C+I+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIV 273
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 128 PQTXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 232
P+ +FV L + EDL +F RFG + C+I+
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIV 204
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNG 316
+++G L +D+ F +G + + + N GFV + A A+ L+ G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNG 316
+++G L +D+ F +G + + + N GFV + A A+ L+ G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNSTFNG 316
+++G L +D+ F +G + + + N GFV + A A+ L+ G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 188 KLFERFGVVTE----CDIMNRCGFVHMQTEEQAAAAIRALHNSTFNGGVISV 331
+L++ FG +T+ C + + GFV T A I + T NG +ISV
Sbjct: 111 ELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISV 162
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC-------GFVHMQTEEQAAAAIRA 292
T VFV + + E L +F +FG +T +M GFV ++ A A+
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 293 LHNSTFNG 316
L++S G
Sbjct: 298 LNDSILEG 305
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC-------GFVHMQTEEQAAAAIRA 292
T VFV + + E L +F +FG +T +M GFV ++ A A+
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 293 LHNSTFNG 316
L++S G
Sbjct: 298 LNDSILEG 305
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC-------GFVHMQTEEQA 274
+FVG P + +LR+ FE+F V + ++ GF+ +TE+QA
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 134 TXVFVGSLPQGSKPEDLRKLFERFGVVTECDIM 232
T +FVG LP + + L + FE+FG + E ++
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVI 67
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 650 PXRCDXGSVRQGKQAPAV-HKRP*GRDPSARTHAGPRRTHSARHRAPPADRVRSRAP 483
P + R+ +++P+ +R R P R+ + PRR S PP + RSR+P
Sbjct: 100 PRKRSRSPPRRTRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSP 156
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Frame = +2
Query: 140 VFVGSLPQGSKPEDLRKLFERFGVVTECDIMNRC-------GFVHMQTEEQA 274
+FVG P + +LR+ FE+F V + ++ GF+ +TE+QA
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 761 TCPR*VCGEQVSGVHTVRAXXSGGRHREAHXNVAYPPPXRCDXG 630
TCP + E+ SG+H G RH++ +AYP D G
Sbjct: 150 TCP--ILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPNGQYMDRG 191
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 761 TCPR*VCGEQVSGVHTVRAXXSGGRHREAHXNVAYPPPXRCDXG 630
TCP + E+ SG+H G RH++ +AYP D G
Sbjct: 150 TCP--ILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPNGQYMDRG 191
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 307 CRVMKRANRRCRLFLCLHMHEPAPV--HYITLCDDAE 203
C + CR +C H +P P+ H LC DA+
Sbjct: 759 CSCVTGGQTVCRQMVCPHCDDPVPIEGHCCPLCKDAK 795
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 307 CRVMKRANRRCRLFLCLHMHEPAPV--HYITLCDDAE 203
C + CR +C H +P P+ H LC DA+
Sbjct: 693 CSCVTGGQTVCRQMVCPHCDDPVPIEGHCCPLCKDAK 729
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 307 CRVMKRANRRCRLFLCLHMHEPAPV--HYITLCDDAE 203
C + CR +C H +P P+ H LC DA+
Sbjct: 759 CSCVTGGQTVCRQMVCPHCDDPVPIEGHCCPLCKDAK 795
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 307 CRVMKRANRRCRLFLCLHMHEPAPV--HYITLCDDAE 203
C + CR +C H +P P+ H LC DA+
Sbjct: 693 CSCVTGGQTVCRQMVCPHCDDPVPIEGHCCPLCKDAK 729
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 307 CRVMKRANRRCRLFLCLHMHEPAPV--HYITLCDDAE 203
C + CR +C H +P P+ H LC DA+
Sbjct: 693 CSCVTGGQTVCRQMVCPHCDDPVPIEGHCCPLCKDAK 729
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 307 CRVMKRANRRCRLFLCLHMHEPAPV--HYITLCDDAE 203
C + CR +C H +P P+ H LC DA+
Sbjct: 693 CSCVTGGQTVCRQMVCPHCDDPVPIEGHCCPLCKDAK 729
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,111,181
Number of Sequences: 27780
Number of extensions: 263008
Number of successful extensions: 957
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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