Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_C09
(879 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 128 3e-31
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 128 3e-31
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 128 3e-31
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 128 3e-31
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 41 4e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 0.56
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 25 4.0
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 24 7.0
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 128 bits (308), Expect = 3e-31
Identities = 59/146 (40%), Positives = 87/146 (59%)
Frame = +2
Query: 437 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 616
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 617 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 796
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 797 LNRLIGQIVSSITASLXFDGALNVDL 874
LN L+ +S +T L F G LN DL
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADL 146
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 128 bits (308), Expect = 3e-31
Identities = 59/146 (40%), Positives = 87/146 (59%)
Frame = +2
Query: 437 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 616
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 617 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 796
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 797 LNRLIGQIVSSITASLXFDGALNVDL 874
LN L+ +S +T L F G LN DL
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADL 146
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 128 bits (308), Expect = 3e-31
Identities = 59/146 (40%), Positives = 87/146 (59%)
Frame = +2
Query: 437 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 616
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 617 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 796
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 797 LNRLIGQIVSSITASLXFDGALNVDL 874
LN L+ +S +T L F G LN DL
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADL 146
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 128 bits (308), Expect = 3e-31
Identities = 59/146 (40%), Positives = 87/146 (59%)
Frame = +2
Query: 437 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 616
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 617 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 796
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 797 LNRLIGQIVSSITASLXFDGALNVDL 874
LN L+ +S +T L F G LN DL
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADL 146
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 41.1 bits (92), Expect = 4e-05
Identities = 26/68 (38%), Positives = 28/68 (41%)
Frame = +3
Query: 174 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 353
P T WS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 354 XXAHTDSC 377
A T SC
Sbjct: 79 APARTASC 86
Score = 36.7 bits (81), Expect = 0.001
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 116 KCVSASLXHVGQAGVQIGNACWE 184
+C+S HVGQAGVQIGN CW+
Sbjct: 3 ECISV---HVGQAGVQIGNPCWD 22
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect(2) = 0.56
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 225 CPQTRPSGVETILSTLSSARPELAS 299
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Score = 21.8 bits (44), Expect(2) = 0.56
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 168 VMPAGSFTAWSTASSLMARCPQTRPSGV 251
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 209 GCRAPGSKAPSRHYRSGLRLGQRVXEMHSR 120
G APGS+ RH R+G + + + E++ +
Sbjct: 32 GSPAPGSRHSIRHGRNGDKRSRMIKELYQQ 61
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 23.8 bits (49), Expect = 7.0
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +3
Query: 102 KNSNQNA*VHLXYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSA 281
KN+ + A + L YT P+S + + S + S+M R E L+T SA
Sbjct: 277 KNNPRLALIFLGYTTPPPDSDGIKYSDSLLGQLLSLSIMPRNHNGPYEYYENPLTTNRSA 336
Query: 282 RPELAS 299
L+S
Sbjct: 337 VDSLSS 342
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 910,570
Number of Sequences: 2352
Number of extensions: 19209
Number of successful extensions: 51
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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