Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_C08
(809 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 439 e-123
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 434 e-122
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 363 e-101
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 268 5e-72
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 215 5e-56
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 1e-34
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 103 1e-22
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 2e-13
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 4e-04
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.1
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.5
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 30 1.9
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.6
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 3.4
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 3.4
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.4
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.4
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.5
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.5
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 4.5
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 7.8
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 439 bits (1081), Expect = e-123
Identities = 206/242 (85%), Positives = 224/242 (92%)
Frame = +3
Query: 81 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 260
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 261 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 440
MNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+S
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 441 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 620
SMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 621 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 800
IAYGLDKK ERNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+H
Sbjct: 181 IAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDH 240
Query: 801 FV 806
FV
Sbjct: 241 FV 242
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 434 bits (1070), Expect = e-122
Identities = 204/243 (83%), Positives = 227/243 (93%), Gaps = 1/243 (0%)
Frame = +3
Query: 81 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 260
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 261 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 440
+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 441 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 620
SMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAA 180
Query: 621 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVN 797
+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VN
Sbjct: 181 LAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVN 240
Query: 798 HFV 806
HFV
Sbjct: 241 HFV 243
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 363 bits (894), Expect = e-101
Identities = 170/237 (71%), Positives = 204/237 (86%), Gaps = 1/237 (0%)
Frame = +3
Query: 99 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 275
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 276 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 455
T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVLT
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823
Query: 456 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 635
KMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGM 883
Query: 636 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 806
DKK GE+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF+
Sbjct: 884 DKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFI 939
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 268 bits (656), Expect = 5e-72
Identities = 136/187 (72%), Positives = 147/187 (78%), Gaps = 25/187 (13%)
Frame = +3
Query: 81 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 260
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 261 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV- 437
MNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120
Query: 438 ------------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQR 545
SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQR
Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQR 180
Query: 546 QATKDAG 566
QATKDAG
Sbjct: 181 QATKDAG 187
Score = 219 bits (536), Expect = 2e-57
Identities = 107/125 (85%), Positives = 114/125 (91%)
Frame = +3
Query: 432 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 611
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 612 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 791
AAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN M
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNM 330
Query: 792 VNHFV 806
V+ FV
Sbjct: 331 VDFFV 335
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 215 bits (524), Expect = 5e-56
Identities = 110/243 (45%), Positives = 154/243 (63%), Gaps = 3/243 (1%)
Frame = +3
Query: 87 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 260
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 261 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEV 437
+NP NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 438 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 617
V+ K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAA
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAA 209
Query: 618 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 797
A+AYGL KK G NV++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R +
Sbjct: 210 ALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQ 268
Query: 798 HFV 806
+ +
Sbjct: 269 YLL 271
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 144 bits (348), Expect = 1e-34
Identities = 77/184 (41%), Positives = 109/184 (59%), Gaps = 4/184 (2%)
Frame = +3
Query: 264 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 440
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 441 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 620
+M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237
Query: 621 IAYGLDKKG---TGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 791
+AYG+ K+ RNV+ D+G + V I G +V STA + +LGG DFD +
Sbjct: 238 LAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVL 297
Query: 792 VNHF 803
V HF
Sbjct: 298 VEHF 301
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 99 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 254
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 103 bits (248), Expect = 1e-22
Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 26/118 (22%)
Frame = +3
Query: 387 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 566
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 567 TISGLN------------------------VLRIINEPTAAAIAYGLDKK--GTGERN 662
TI+GL+ VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 80.2 bits (189), Expect = 2e-15
Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Frame = +3
Query: 381 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 560
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 561 AGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL------ 710
A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +I+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTK 186
Query: 711 TIEDGIFE------VKSTAGDTHLGGEDFDNRMVNHFV 806
T + GI E +K D LGG D R+ +H V
Sbjct: 187 TKDRGISETAPQLVIKGIGFDRTLGGHAIDMRLRDHLV 224
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 73.7 bits (173), Expect = 2e-13
Identities = 29/48 (60%), Positives = 40/48 (83%)
Frame = +3
Query: 663 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 806
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ +
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLI 49
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/48 (35%), Positives = 34/48 (70%)
Frame = +3
Query: 654 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 797
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLD 200
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 150 GKVEIIANDQGNRTTPSYVAFTDTERLI 233
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 612 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 779
A A L +G E + D G GT VS + +E+G +++ D H+ G F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 660 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 779
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +3
Query: 600 NEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 779
N P A + GT E +I DLG G + + + E G V +TH+ G F
Sbjct: 3007 NAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPF 3065
Query: 780 DNRM 791
R+
Sbjct: 3066 KIRV 3069
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 159 EIIANDQGNRTTPSYVAFT-DTERL 230
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 663 VLIFDLGGGTFDVSILTIEDGIFEVK 740
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -2
Query: 799 WFTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 629
+F +L P KW D T I +V PPPR + + +PF+S+P
Sbjct: 558 YFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTAKL-ATLPFVSQP 613
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 669 IFDLGGGTFDVSILTIEDGIFEV 737
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 29.5 bits (63), Expect = 3.4
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Frame = +2
Query: 410 RQNLFPRGSQFHGAYENEGNCRSLSRQNCAECSY---HG----SRVLQ*LSKTSHKRCRY 568
R+++FP+G H +Y C L R S+ HG S L+ K + C +
Sbjct: 1366 RRHVFPKGHVAHRSYHVYSICALLRRYRLTHSSFLLHHGQTGNSGTLRSFCKFIMRECGW 1425
Query: 569 HLRLERSPN---HQ*T----HCCCDCLRS*QKGYW 652
+R HQ CCC C R + YW
Sbjct: 1426 RVRAGTDACVIFHQFDDAIRECCCLCCRGRRGKYW 1460
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 167 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 337
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 760 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 644
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 267 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 169
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 285 RILCCWGSSPPGSWRH 238
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 285 RILCCWGSSPPGSWRH 238
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +3
Query: 447 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 596
V K T+E Y+G T + NA +T+P YF + +K G G+ +
Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051
Query: 597 INEPTAAAIAYGLDKKGTG 653
+++ I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 676 TSAAVPSTCPSLPSRMVSSR*NPPPATP 759
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -2
Query: 475 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 296
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 295 RLASNIVL 272
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 737 HLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSSSG 606
H+EDT DG DG E +E K + S SN+ G
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDG 529
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = -2
Query: 805 TKWFTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 626
+ W KS K P +S + SS TSK PP + +ST SP
Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301
Query: 625 AIAAAVGSLMIRRTF 581
A+ A+ SL++ F
Sbjct: 1302 AVNVAISSLVLPSLF 1316
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,667,499
Number of Sequences: 59808
Number of extensions: 635029
Number of successful extensions: 2080
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -