Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_C07
         (842 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.43 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -1

Query: 308 CAAFFWSVALCPCCFFIL-DIFSAALACD*IFWCPRAIVYC 189
           C  +F+ + L  CC FI+  +    L C   F+C   I+ C
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLC 297



 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 311 FCAAFFWSVALCPCCFFI 258
           FCA   +++ L  CC FI
Sbjct: 170 FCAFIIFTMHLLFCCAFI 187


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 400 NDLPDDLKNI*HNQYHLDL 456
           ND P  L  + +N +H+DL
Sbjct: 318 NDTPSILHELRNNYFHMDL 336


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 400 NDLPDDLKNI*HNQYHLDL 456
           ND P  L  + +N +H+DL
Sbjct: 318 NDTPSILHELRNNYFHMDL 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,819
Number of Sequences: 336
Number of extensions: 3364
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)