Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_C04
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 283 7e-77
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 283 7e-77
Z99271-4|CAB16474.1| 105|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical pr... 33 0.29
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 30 1.6
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 30 1.6
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 30 1.6
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 30 1.6
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40951-4|AAG01568.1| 756|Caenorhabditis elegans Temporarily ass... 29 4.8
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 28 6.3
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 28 6.3
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 28 6.3
U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical pr... 28 8.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 8.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 8.4
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 283 bits (695), Expect = 7e-77
Identities = 124/203 (61%), Positives = 161/203 (79%)
Frame = +2
Query: 155 RAPYVSEMKFFNETSYEPIPIYRVMDNNGQIIDKNEEPNLDKATLINMYKTMVQLSHMDK 334
+A + +++ N +PIYRV + G +IDK+++PN D+ T + MYKTM QL+ MD+
Sbjct: 42 KAAFTEKLEIVNADDTPALPIYRVTNAVGDVIDKSQDPNFDEQTSLKMYKTMTQLNIMDR 101
Query: 335 ILYESQRQGRISFYMTNYGEEGIHIGSASALSPKDLVFSQYREVGVFLYRGMTVTELVNQ 514
ILY+SQRQGRISFYMT++GEEG H+GSA+AL P+DL++ QYRE GV L+RG T+ +NQ
Sbjct: 102 ILYDSQRQGRISFYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQ 161
Query: 515 CYGNCEDPGKGRQMPVHYGSKHHNMVTISSPLGTQMPQAVGAAYAYKRVPNNDRCVICYF 694
CYGN +D GKGRQMP+H+G+K N VTISSPL TQ+PQAVG+AYA+K+ +N+R + YF
Sbjct: 162 CYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYF 221
Query: 695 GDGAASEGDAHAAFNFAATLXCP 763
GDGAASEGDAHAAFNFAATL CP
Sbjct: 222 GDGAASEGDAHAAFNFAATLKCP 244
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 283 bits (695), Expect = 7e-77
Identities = 124/203 (61%), Positives = 161/203 (79%)
Frame = +2
Query: 155 RAPYVSEMKFFNETSYEPIPIYRVMDNNGQIIDKNEEPNLDKATLINMYKTMVQLSHMDK 334
+A + +++ N +PIYRV + G +IDK+++PN D+ T + MYKTM QL+ MD+
Sbjct: 41 KAAFTEKLEIVNADDTPALPIYRVTNAVGDVIDKSQDPNFDEQTSLKMYKTMTQLNIMDR 100
Query: 335 ILYESQRQGRISFYMTNYGEEGIHIGSASALSPKDLVFSQYREVGVFLYRGMTVTELVNQ 514
ILY+SQRQGRISFYMT++GEEG H+GSA+AL P+DL++ QYRE GV L+RG T+ +NQ
Sbjct: 101 ILYDSQRQGRISFYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQ 160
Query: 515 CYGNCEDPGKGRQMPVHYGSKHHNMVTISSPLGTQMPQAVGAAYAYKRVPNNDRCVICYF 694
CYGN +D GKGRQMP+H+G+K N VTISSPL TQ+PQAVG+AYA+K+ +N+R + YF
Sbjct: 161 CYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYF 220
Query: 695 GDGAASEGDAHAAFNFAATLXCP 763
GDGAASEGDAHAAFNFAATL CP
Sbjct: 221 GDGAASEGDAHAAFNFAATLKCP 243
>Z99271-4|CAB16474.1| 105|Caenorhabditis elegans Hypothetical
protein Y43F4A.4 protein.
Length = 105
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = +2
Query: 158 APYVSEMKFFNETSYEPIPIYRVMDNNGQIIDKNEEPNLDKATLINMYKTMVQLSHMDKI 337
A + +++ N +PIYRV + G +IDK+++PN D+ +L+ MYKTM QL+ MD+I
Sbjct: 42 AAFTEKLEIVNADDTPALPIYRVTNAVGDVIDKSQDPNFDEQSLLKMYKTMTQLNIMDRI 101
Query: 338 LYES 349
LY+S
Sbjct: 102 LYDS 105
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 60.9 bits (141), Expect = 1e-09
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 1/170 (0%)
Frame = +2
Query: 257 NEEPNLDKATLINMYKTMVQLSHMDKILYESQRQGRISFYMTNY-GEEGIHIGSASALSP 433
N L++ + Y+ M + M+ ++ +I + Y G+E +G +A++
Sbjct: 62 NTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTE 121
Query: 434 KDLVFSQYREVGVFLYRGMTVTELVNQCYGNCEDPGKGRQMPVHYGSKHHNMVTISSPLG 613
D V + YR G G TVTE++ + G G+ +H +K N + +G
Sbjct: 122 GDAVITAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTK--NFYGGNGIVG 179
Query: 614 TQMPQAVGAAYAYKRVPNNDRCVICYFGDGAASEGDAHAAFNFAATLXCP 763
Q P G A A K + CV Y GDGAA++G A N A P
Sbjct: 180 AQQPLGAGVALAMKYREQKNVCVTLY-GDGAANQGQLFEATNMAKLWDLP 228
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 60.9 bits (141), Expect = 1e-09
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 1/170 (0%)
Frame = +2
Query: 257 NEEPNLDKATLINMYKTMVQLSHMDKILYESQRQGRISFYMTNY-GEEGIHIGSASALSP 433
N L++ + Y+ M + M+ ++ +I + Y G+E +G +A++
Sbjct: 45 NTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTE 104
Query: 434 KDLVFSQYREVGVFLYRGMTVTELVNQCYGNCEDPGKGRQMPVHYGSKHHNMVTISSPLG 613
D V + YR G G TVTE++ + G G+ +H +K N + +G
Sbjct: 105 GDAVITAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTK--NFYGGNGIVG 162
Query: 614 TQMPQAVGAAYAYKRVPNNDRCVICYFGDGAASEGDAHAAFNFAATLXCP 763
Q P G A A K + CV Y GDGAA++G A N A P
Sbjct: 163 AQQPLGAGVALAMKYREQKNVCVTLY-GDGAANQGQLFEATNMAKLWDLP 211
>Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical
protein F01G10.1 protein.
Length = 618
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 584 NMVTISS-PLGTQMPQAVGAAYAYKRVPNNDRCVICYFGDGAASEGDAHAAFNFAA 748
N + +++ LG + A G AY K + V C GDG ++EG A FA+
Sbjct: 112 NFIDVATGSLGQGLGVATGMAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAAFAS 167
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +2
Query: 245 IIDKNEEPNLDKATLINMYKTMVQL---SHMDKILYESQRQGRISFYMTNYGE 394
I+D+N++ +DK+ L ++Y +M Q+ S +D ++ E+ + ++T +GE
Sbjct: 35 IMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGE 87
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +2
Query: 245 IIDKNEEPNLDKATLINMYKTMVQL---SHMDKILYESQRQGRISFYMTNYGE 394
I+D+N++ +DK+ L ++Y +M Q+ S +D ++ E+ + ++T +GE
Sbjct: 35 IMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGE 87
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +2
Query: 245 IIDKNEEPNLDKATLINMYKTMVQL---SHMDKILYESQRQGRISFYMTNYGE 394
I+D+N++ +DK+ L ++Y +M Q+ S +D ++ E+ + ++T +GE
Sbjct: 35 IMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGE 87
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +2
Query: 245 IIDKNEEPNLDKATLINMYKTMVQL---SHMDKILYESQRQGRISFYMTNYGE 394
I+D+N++ +DK+ L ++Y +M Q+ S +D ++ E+ + ++T +GE
Sbjct: 35 IMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGE 87
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -1
Query: 534 SSQFP*HWFTSSVTVIPRYKNTPTSLY*LKTKSFGE----SAEALPMWMP 397
SS+ W ++ IPRYK T ++++ +KS + + E L WMP
Sbjct: 220 SSESTERWIDLFLSAIPRYKETNSTIFWSSSKSLAKEMERNGELLIPWMP 269
>U40951-4|AAG01568.1| 756|Caenorhabditis elegans Temporarily
assigned gene nameprotein 130 protein.
Length = 756
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 183 SSTKLVTSQFRFIELWIITDRSSTKMKNRTWIRLR*LTCTKPWYN*AIWIKFYMN 347
+S LV+ +F F +W + R +W+ R L+C P Y ++ +N
Sbjct: 566 ASMLLVSLEFYFKGIWTLNLRELRNSIRLSWVSSRHLSCVVPAYKARFFVILLLN 620
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
protein 19,isoform a protein.
Length = 1783
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 198 LVSLKNFISLTYGALAPGNSAILPPPFCAVSGLVRVDKSLA 76
LV + +FI +TYG L PG + ++ F + ++R+ K L+
Sbjct: 1187 LVVVGSFIDITYGKLNPGGTNLISINFFRLFRVMRLVKLLS 1227
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
protein 19,isoform b protein.
Length = 1877
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 198 LVSLKNFISLTYGALAPGNSAILPPPFCAVSGLVRVDKSLA 76
LV + +FI +TYG L PG + ++ F + ++R+ K L+
Sbjct: 1187 LVVVGSFIDITYGKLNPGGTNLISINFFRLFRVMRLVKLLS 1227
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -1
Query: 369 EMRPCLCDSYRILSIWLSCTMVLYMLISVALSKFGSSFLSMICPLLSI 226
EMR C S ++ + CTM + S++L FG + LS+ P+ +
Sbjct: 202 EMRSC---SLELIPVPAMCTMFRELPTSISLLDFGDNHLSIFPPIFHL 246
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 198 LVSLKNFISLTYGALAPGNSAILPPPFCAVSGLVRVDKSLA 76
LV + +FI +TYG L PG + ++ F + ++R+ K L+
Sbjct: 1187 LVVVGSFIDITYGKLNPGGTNLISINFFRLFRVMRLVKLLS 1227
>U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical
protein C44B7.4 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 244 LSVIIHNSINR-NWLVTSFVEEFHFTHVRCSCARKFCYLTTAILCR 110
+ V+I +S+ WL F++ ++ RC + +FC ++ AILC+
Sbjct: 105 IEVLIQSSVAPIAWLFVVFLDGGYY---RCYRSHEFCLISDAILCK 147
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 197 SYEPIPIYRVMDNNGQIIDKNEEPNLDKATLINMYKTMVQLSHMDKILYESQRQGRISFY 376
S P P +DNNG++I+++ + ++K T++N T++ ++ +D SQ QG +
Sbjct: 15719 SGRPQPEVIWIDNNGKVIEESRKMKIEK-TVLN---TVLTINSID-----SQDQGEFALK 15769
Query: 377 MTN-YGEEGIHIG 412
+ N GE+ IG
Sbjct: 15770 IKNRCGEDKYAIG 15782
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 197 SYEPIPIYRVMDNNGQIIDKNEEPNLDKATLINMYKTMVQLSHMDKILYESQRQGRISFY 376
S P P +DNNG++I+++ + ++K T++N T++ ++ +D SQ QG +
Sbjct: 15719 SGRPQPEVIWIDNNGKVIEESRKMKIEK-TVLN---TVLTINSID-----SQDQGEFALK 15769
Query: 377 MTN-YGEEGIHIG 412
+ N GE+ IG
Sbjct: 15770 IKNRCGEDKYAIG 15782
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,271,970
Number of Sequences: 27780
Number of extensions: 379605
Number of successful extensions: 1020
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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