Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_B16
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.1  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.5  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 421 PDLDIMDKPPRKAD 462
           P++DI DKP +K D
Sbjct: 66  PEIDIEDKPAQKID 79


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 861 LEHGRKNLDVEDDEMKSEGER 799
           L  G KN+ + DD  K E +R
Sbjct: 136 LTEGAKNMTINDDLEKREKDR 156


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/46 (23%), Positives = 17/46 (36%)
 Frame = +2

Query: 437  WTSPLARLTKVSSPDGCSSDTWLSVAT*VRPQSALPPGGSCTPRTD 574
            WT+   R T  + P   S+ T  +        + +PP     P  D
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVD 1097


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 575 LK*HTGNSLITYNVSAVVMNLRV 643
           +K H   +++TY +  +  NLR+
Sbjct: 564 VKSHIAGAIVTYELVVIQFNLRL 586


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,636
Number of Sequences: 336
Number of extensions: 3474
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)