Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_B14
(904 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 219 2e-57
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 142 3e-34
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 111 6e-25
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 88 8e-18
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 78 8e-15
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 34 0.13
04_01_0552 + 7125735-7126424,7126473-7126911,7127694-7128031 32 0.72
04_01_0546 + 7091058-7091508,7092221-7092542,7092783-7092822 31 1.7
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 30 2.2
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 30 2.9
08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251... 29 5.1
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 219 bits (535), Expect = 2e-57
Identities = 115/273 (42%), Positives = 163/273 (59%), Gaps = 20/273 (7%)
Frame = +1
Query: 142 MIHSLFIINPSGDVFLEKHWRSV-IPRSVCDYYLEAQRA-SPNDVPPVLAAPHHYLISIH 315
M+ +F+++ SG+V +EK + + R +C ++ + A + D V+ +P HYL ++
Sbjct: 1 MLQCVFLLSDSGEVMVEKQMTAHRVDRGICGWFWDYVLAHAAGDASKVVVSPTHYLFQVY 60
Query: 316 RGGVALVAVCKQEVAPLFVIE------------------FLHRVVDTFQDYFSDCTETII 441
R GV +A + E+ PL IE FL RV D DY D E II
Sbjct: 61 RNGVTFLACTQVEMPPLLAIEVLTFALFYGSVNMICDFQFLSRVADVLTDYLGDLNEDII 120
Query: 442 KENYVVVYELLDEMLDNGFPLATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQL 621
K+N+V+VY++LDEM+DNGFPL TE NILKE+I PPNI+ + N VT +
Sbjct: 121 KDNFVLVYQILDEMMDNGFPLTTEPNILKEMIAPPNIVSKMLNVVTDAA----------A 170
Query: 622 SNVPWRRSGVKYANNEAYFDVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTF 801
S VPWR + VK A+NE Y ++VEE+DA +++ GA V E G I L G+P+LTL+F
Sbjct: 171 SFVPWRTTVVKDASNEVYVNIVEELDACVNREGALVKCEAYGKIQVNSSLPGVPELTLSF 230
Query: 802 VNPRLFDDVSFHPCVRXKRWEAERILSFIPPDG 900
NP + +DV FHPCVR + WE+ +ILSF+PPDG
Sbjct: 231 SNPTIINDVRFHPCVRFRPWESNQILSFVPPDG 263
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 142 bits (345), Expect = 3e-34
Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 19/272 (6%)
Frame = +1
Query: 145 IHSLFIINPSGDVFLEKHWRSVIPRSVCDYY----LEAQRASPNDVPPVLAAPHHYLISI 312
+ +LF+++ G V + + +R + + + L+ + S P V + I
Sbjct: 5 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVTYMFI 64
Query: 313 HRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDN 492
V L+ +Q ++ FLHRVVD F+ YF + E +++N+VVVYELLDEM+D
Sbjct: 65 QHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDF 124
Query: 493 GFPLATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSNVPWRRSGVKYANNEA 672
G+P TE+ IL E IK T + VS P + V WR G++Y NE
Sbjct: 125 GYPQYTEAKILSEFIK----------TDAYRMEVSQRPPMAVTNAVSWRSEGIRYKKNEV 174
Query: 673 YFDVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRLF----------- 819
+ DVVE V+ +++ +G V +++ G + LSGMP+ L +N R+
Sbjct: 175 FLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVLLEAQGRATKGK 233
Query: 820 ----DDVSFHPCVRXKRWEAERILSFIPPDGN 903
DD+ FH CVR R+E +R +SFIPPDG+
Sbjct: 234 AIDLDDIKFHQCVRLARFENDRTISFIPPDGS 265
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 111 bits (268), Expect = 6e-25
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 22/272 (8%)
Frame = +1
Query: 151 SLFIINPSGDVFLEKHWRSVIPRSVCDYY-LEAQRASPNDVPPVLAAPHHYLISIHRGGV 327
+++ +N GDV + + +R + ++ D + + + PV + + V
Sbjct: 7 AIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFLYMRISNV 66
Query: 328 ALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDC-TETIIKENYVVVYELLDEMLDNGFPL 504
+V V +F+ V F+ YF E I+ N+V++YELLDE++D G+P
Sbjct: 67 YIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQ 126
Query: 505 ATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSNVPWRRSGVKYANNEAYFDV 684
ILK I + ++ + K ++TL V WRR G+ Y NE + D+
Sbjct: 127 NLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQV--TGAVGWRREGLMYKKNEVFLDI 184
Query: 685 VEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRL---------------- 816
VE V+ ++ G+ + ++ G I LSGMPDL L +N ++
Sbjct: 185 VESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLG-LNDKIGLEKEAQLKSRPAKSG 243
Query: 817 ----FDDVSFHPCVRXKRWEAERILSFIPPDG 900
DDV+FH CV R+ +E+ +SF+PPDG
Sbjct: 244 KTIELDDVTFHQCVNLTRFNSEKTVSFVPPDG 275
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 88.2 bits (209), Expect = 8e-18
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Frame = +1
Query: 142 MIHSLFIINPSGDVFLEKHWRSVIPRSVCDYYLEAQRASPND----VPPVLAAPHHYLIS 309
MI F+++ GD + + +R +P+ + + + +D PPV I
Sbjct: 1 MISQFFVLSQRGDHIVFRDYRGEVPKGSAEIFFRKVKFWNDDEAEEAPPVFNVDGVNYIH 60
Query: 310 IHRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLD 489
+ G+ V V+P ++E L R+ +DY E +++N+++VYELLDE++D
Sbjct: 61 VKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNFILVYELLDEVID 120
Query: 490 NGFPLATESNILKELI-KPPNILRTIANTVTGKSNV----SSTLPSGQLS-NVPWRRSGV 651
G+P T + +LK I P ++ G + + + +P ++ +V G
Sbjct: 121 FGYPQTTSTEVLKSYIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTAVTKSVVATEPGG 180
Query: 652 KYANNEAYFDVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPR------ 813
K E + D++E + SG + +EI G I L+G P++ L
Sbjct: 181 K-KREEIFVDIIERISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRTG 239
Query: 814 ---------------LFDDVSFHPCVRXKRWEAERILSFIPPDG 900
+ DD +FH V ++ +R L IPPDG
Sbjct: 240 SSSYDYRSSSGGGAVILDDCNFHESVHLDSFDIDRTLHLIPPDG 283
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 78.2 bits (184), Expect = 8e-15
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Frame = +1
Query: 145 IHSLFIINPSGDVFLEKHWRSVIPRSVCDYYLEAQRASPNDVPPVLAAPHH-----YLIS 309
+ +LF+++ G V + + +R + + + +D + H Y+
Sbjct: 6 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMF- 64
Query: 310 IHRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLD 489
I V L+ +Q ++ FLHRVVD F+ YF + E +++N+VVVYELLDEM+D
Sbjct: 65 IQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMD 124
Query: 490 NGFPLATESNILKELIK 540
G+P TE+ IL E IK
Sbjct: 125 FGYPQYTEAMILSEFIK 141
Score = 59.7 bits (138), Expect = 3e-09
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Frame = +1
Query: 667 EAYFDVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRLF--------- 819
E + DVVE V+ +++ +G V +++ G + LSGMP+ L +N R+
Sbjct: 148 EVFLDVVESVNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLG-LNDRVLLEAQGRTTK 206
Query: 820 ------DDVSFHPCVRXKRWEAERILSFIPPDGN 903
DD+ FH CVR R+E +R +SFIPPDG+
Sbjct: 207 GKAIDLDDIKFHQCVRLARFENDRTISFIPPDGS 240
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 364 LFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGFPLAT-ESNIL 525
L ++EF+H +V+T +F + E I + V+ +L+EM+ NG + T + NIL
Sbjct: 79 LAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNIL 133
>04_01_0552 + 7125735-7126424,7126473-7126911,7127694-7128031
Length = 488
Score = 31.9 bits (69), Expect = 0.72
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 115 KLNLXSVENMIHSLFIINPSGDVFLEKHWR-SVIPRSVCDYYLEAQRASPN 264
K L VE++I ++ ++N D +L WR I +V +YL+ R PN
Sbjct: 230 KRELEKVEDLIAAMLLLNQEAD-YLASAWRFKTIGPTVPSFYLDDDRLQPN 279
>04_01_0546 + 7091058-7091508,7092221-7092542,7092783-7092822
Length = 270
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 121 NLXSVENMIHSLFIINPSGDVFLEKHWR-SVIPRSVCDYYLEAQRASPN 264
++ +VE++I ++ ++N D +L WR + +V +YL+ R PN
Sbjct: 6 SMKNVEDLIDAMLLLNQEAD-YLASAWRFKTVGPTVPSFYLDDDRLQPN 53
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 364 LFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNG 495
L V+E +H V+ YF E + N+ Y +LDE+L G
Sbjct: 189 LEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAG 232
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 172 SGDVFLEKHWRSVIPRSVCDYYLEAQRASPNDVPPVLAAP 291
S D+F + ++ PRS D + A S N V P +AAP
Sbjct: 205 SCDLFKVMYGTTIDPRSTLDLKIAAAARSSNGVAPAIAAP 244
>08_02_1063 +
24024030-24024506,24024803-24024856,24024965-24025118,
24025314-24025388,24025511-24025788,24026023-24026253,
24026522-24026620,24026740-24026889,24027830-24027976,
24028525-24028575,24028647-24028819,24029018-24029147,
24029361-24029458,24029655-24029892,24030634-24030837,
24031003-24031083,24031296-24031535
Length = 959
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 241 EAQRASPNDVPPVLAAPHHYLISIHRGGVA 330
+A +S P +LA+PHH+L+S RG A
Sbjct: 12 KAISSSSRSKPSLLASPHHFLLSRGRGSGA 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,439,939
Number of Sequences: 37544
Number of extensions: 464091
Number of successful extensions: 1291
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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