Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_B14
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 394 e-110
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 161 8e-40
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 161 8e-40
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 148 5e-36
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 146 3e-35
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 145 4e-35
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 143 1e-34
U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chai... 36 0.040
Z81073-8|CAN86905.1| 271|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z81073-7|CAB03032.2| 248|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 32 0.65
AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, smal... 31 0.85
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 30 2.0
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 30 2.0
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 30 2.0
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 30 2.0
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 30 2.0
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 30 2.0
U61235-1|AAB17540.1| 485|Caenorhabditis elegans ZK protein. 29 4.5
U21308-4|AAB93321.1| 484|Caenorhabditis elegans Warthog (hedgeh... 29 4.5
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 394 bits (969), Expect = e-110
Identities = 171/256 (66%), Positives = 212/256 (82%), Gaps = 2/256 (0%)
Frame = +1
Query: 142 MIHSLFIINPSGDVFLEKHWRSVIPRSVCDYYLEAQRAS--PNDVPPVLAAPHHYLISIH 315
M++SLF +N SGDV LEKHW+SVI RS+CDY+ + Q+ S P DVPP+++ PHHYLI+++
Sbjct: 1 MLNSLFFVNSSGDVLLEKHWKSVIHRSICDYFFDIQKKSIHPEDVPPIISTPHHYLINVY 60
Query: 316 RGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNG 495
+ + LVAV E PL VIEFLHRV+ TF YF + +++ +KEN V+V+ELLDEMLDNG
Sbjct: 61 QNNLFLVAVITVETPPLMVIEFLHRVIQTFTQYFDEFSDSSMKENCVMVFELLDEMLDNG 120
Query: 496 FPLATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSNVPWRRSGVKYANNEAY 675
FPL TE NIL++LIKPPN LR IAN VTG++N+S TLP+GQLSN+PWRR GVKY NNEAY
Sbjct: 121 FPLVTEMNILQDLIKPPNFLRNIANQVTGRTNLSETLPTGQLSNIPWRRQGVKYTNNEAY 180
Query: 676 FDVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRLFDDVSFHPCVRXK 855
FDV+EE+D I+DK G+TV AEIQGY+D C KLSGMPDLT+T +NPRL DDVSFHPCVR K
Sbjct: 181 FDVIEEIDVIVDKQGSTVFAEIQGYVDVCCKLSGMPDLTMTLINPRLLDDVSFHPCVRYK 240
Query: 856 RWEAERILSFIPPDGN 903
RWE E++LSF+PPDGN
Sbjct: 241 RWENEKVLSFVPPDGN 256
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 161 bits (390), Expect = 8e-40
Identities = 88/266 (33%), Positives = 141/266 (53%), Gaps = 16/266 (6%)
Frame = +1
Query: 151 SLFIINPSGDVFLEKHWRSVIPRSVCDYYLEA--QRASPNDVPPVLAAPHHYLISIHRGG 324
++FI++ G + +++R I + D ++ ++ PVL + I
Sbjct: 5 AMFILDLKGKTIISRNYRGDIDMTAIDKFIHLLMEKEEEGSAAPVLTYQDTNFVFIKHTN 64
Query: 325 VALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGFPL 504
+ LV+ C+ V ++ FL++ V+ F +YF D E +++N+VV+YELLDEM+D GFP
Sbjct: 65 IYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQ 124
Query: 505 ATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSN-VPWRRSGVKYANNEAYFD 681
TES IL+E I T G+ +S+ P ++N V WR G+KY NE + D
Sbjct: 125 TTESRILQEYI-----------TQEGQKLISAPRPPMAVTNAVSWRSEGIKYRKNEVFLD 173
Query: 682 VVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRLF-------------D 822
V+E V+ + +G + +EI G + + L+GMP+L L + LF +
Sbjct: 174 VIESVNMLASANGTVLQSEIVGSVKMRVYLTGMPELRLGLNDKVLFEGSGRGKSKSVELE 233
Query: 823 DVSFHPCVRXKRWEAERILSFIPPDG 900
DV FH CVR R++ +R +SFIPPDG
Sbjct: 234 DVKFHQCVRLSRFDTDRTISFIPPDG 259
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 161 bits (390), Expect = 8e-40
Identities = 88/266 (33%), Positives = 141/266 (53%), Gaps = 16/266 (6%)
Frame = +1
Query: 151 SLFIINPSGDVFLEKHWRSVIPRSVCDYYLEA--QRASPNDVPPVLAAPHHYLISIHRGG 324
++FI++ G + +++R I + D ++ ++ PVL + I
Sbjct: 5 AMFILDLKGKTIISRNYRGDIDMTAIDKFIHLLMEKEEEGSAAPVLTYQDTNFVFIKHTN 64
Query: 325 VALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGFPL 504
+ LV+ C+ V ++ FL++ V+ F +YF D E +++N+VV+YELLDEM+D GFP
Sbjct: 65 IYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQ 124
Query: 505 ATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSN-VPWRRSGVKYANNEAYFD 681
TES IL+E I T G+ +S+ P ++N V WR G+KY NE + D
Sbjct: 125 TTESRILQEYI-----------TQEGQKLISAPRPPMAVTNAVSWRSEGIKYRKNEVFLD 173
Query: 682 VVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRLF-------------D 822
V+E V+ + +G + +EI G + + L+GMP+L L + LF +
Sbjct: 174 VIESVNMLASANGTVLQSEIVGSVKMRVYLTGMPELRLGLNDKVLFEGSGRGKSKSVELE 233
Query: 823 DVSFHPCVRXKRWEAERILSFIPPDG 900
DV FH CVR R++ +R +SFIPPDG
Sbjct: 234 DVKFHQCVRLSRFDTDRTISFIPPDG 259
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 148 bits (359), Expect = 5e-36
Identities = 89/276 (32%), Positives = 132/276 (47%), Gaps = 23/276 (8%)
Frame = +1
Query: 142 MIHSLFIINPSGDVFLEKHWRSVIPRSVCDYY-LEAQRASPNDVPPVLAAPHHYLISIHR 318
MI LF+ N G+V + + +R + R+ D + + A PV + R
Sbjct: 1 MIGGLFVYNHKGEVLISRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKR 60
Query: 319 GGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGF 498
G V + AV +Q V V EFL R DT Q YF E +K N+V++YELLDE+LD G+
Sbjct: 61 GNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGY 120
Query: 499 PLATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSNVPWRRSGVKYANNEAYF 678
P T+ +LK I + RT V S + S + WRR G+KY NE +
Sbjct: 121 PQNTDPGVLKTFITQQGV-RTADAPVPVTKEEQSQITSQVTGQIGWRREGIKYRRNELFL 179
Query: 679 DVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRL-------------- 816
DV+E V+ ++++ G ++A + G + LSGMP+ +N ++
Sbjct: 180 DVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPECKFG-INDKITIEGKSKPGSDDPN 238
Query: 817 --------FDDVSFHPCVRXKRWEAERILSFIPPDG 900
DD FH CV+ ++E E +SFIPPDG
Sbjct: 239 KASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDG 274
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 146 bits (353), Expect = 3e-35
Identities = 88/276 (31%), Positives = 131/276 (47%), Gaps = 23/276 (8%)
Frame = +1
Query: 142 MIHSLFIINPSGDVFLEKHWRSVIPRSVCDYY-LEAQRASPNDVPPVLAAPHHYLISIHR 318
MI LF+ N G+V + + +R + R+ D + + A PV + R
Sbjct: 1 MIGGLFVYNHKGEVLISRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKR 60
Query: 319 GGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGF 498
G V + AV +Q V V FL R DT Q YF E +K N+V++YELLDE+LD G+
Sbjct: 61 GNVWICAVTRQNVNAAMVFAFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGY 120
Query: 499 PLATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSNVPWRRSGVKYANNEAYF 678
P T+ +LK I + RT V S + S + WRR G+KY NE +
Sbjct: 121 PQNTDPGVLKTFITQQGV-RTADAPVPVTKEEQSQITSQVTGQIGWRREGIKYRRNELFL 179
Query: 679 DVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRL-------------- 816
DV+E V+ ++++ G ++A + G + LSGMP+ +N ++
Sbjct: 180 DVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPECKFG-INDKITIEGKSKPGSDDPN 238
Query: 817 --------FDDVSFHPCVRXKRWEAERILSFIPPDG 900
DD FH CV+ ++E E +SFIPPDG
Sbjct: 239 KASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDG 274
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 145 bits (351), Expect = 4e-35
Identities = 91/276 (32%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Frame = +1
Query: 142 MIHSLFIINPSGDVFLEKHWRSVIPRSVCDYY-LEAQRASPNDVPPVLAAPHHYLISIHR 318
MI LF+ N G+V + + +R + R+ D + + A PV + R
Sbjct: 1 MIGGLFVYNHKGEVLISRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKR 60
Query: 319 GGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGF 498
G V + AV +Q V V EFL R DT Q YF E +K N+V++YELLDE+LD G+
Sbjct: 61 GNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGY 120
Query: 499 PLATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSNVPWRRSGVKYANNEAYF 678
P T+ +LK I + RT T +S ++S + +GQ+ WRR G+KY NE +
Sbjct: 121 PQNTDPGVLKTFITQQGV-RTA--TKEEQSQITSQV-TGQIG---WRREGIKYRRNELFL 173
Query: 679 DVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRL-------------- 816
DV+E V+ ++++ G ++A + G + LSGMP+ +N ++
Sbjct: 174 DVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLSGMPECKFG-INDKITIEGKSKPGSDDPN 232
Query: 817 --------FDDVSFHPCVRXKRWEAERILSFIPPDG 900
DD FH CV+ ++E E +SFIPPDG
Sbjct: 233 KASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDG 268
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 143 bits (347), Expect = 1e-34
Identities = 87/273 (31%), Positives = 138/273 (50%), Gaps = 21/273 (7%)
Frame = +1
Query: 145 IHSLFIINPSGDVFLEKHWRSVIPRSVCDYYLE--AQRASPNDVPPVLAAPHHYLISIHR 318
I LFI++ G+V + +++R + S + ++ ++ PVL I
Sbjct: 3 ISGLFILDLKGNVVISRNYRGDVDMSCIEKFMPLLVEKEDEGSASPVLVHQGISYTYIKY 62
Query: 319 GGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGF 498
V LV + K+ + V+ L+++V+ F +YF E +++N+V++YEL DEMLD G+
Sbjct: 63 MNVYLVTISKKNTNVILVLSALYKIVEVFCEYFKTLEEEAVRDNFVIIYELFDEMLDFGY 122
Query: 499 PLATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSNVPWRRSGVKYANNEAYF 678
P TES IL+E I T G + P + V WR G+KY NE +
Sbjct: 123 PQTTESKILQEFI-----------TQQGNRLETVRPPMAVTNAVSWRSEGIKYRKNEVFL 171
Query: 679 DVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRLF------------- 819
DV+E V+ + + G + +EI G I + LSGMP+L L +N ++F
Sbjct: 172 DVIESVNMLANAQGTVLRSEIVGSIRFRVVLSGMPELRLG-LNDKVFFQQSGASSRRGNS 230
Query: 820 ------DDVSFHPCVRXKRWEAERILSFIPPDG 900
+D+ FH CVR R+++ER +SFIPPDG
Sbjct: 231 GKGVELEDIKFHQCVRLSRFDSERTISFIPPDG 263
>U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chain
(clathrin associatedcomplex) protein 2 protein.
Length = 142
Score = 35.9 bits (79), Expect = 0.040
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 364 LFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEM-LDNGFPLATESNILKELI 537
L+ +E +H V+ +YF + E + N+ VY ++DEM L +++ +LK+L+
Sbjct: 78 LYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLL 136
>Z81073-8|CAN86905.1| 271|Caenorhabditis elegans Hypothetical
protein F30F8.5b protein.
Length = 271
Score = 31.9 bits (69), Expect = 0.65
Identities = 29/89 (32%), Positives = 41/89 (46%)
Frame = +1
Query: 418 SDCTETIIKENYVVVYELLDEMLDNGFPLATESNILKELIKPPNILRTIANTVTGKSNVS 597
SDC+ T K+N V E +M ++ T+SN K L PP LRT ++T G N+
Sbjct: 35 SDCS-TPEKQNGAVGNE--QQMNNSTSTRRTDSN--KNLSPPPQRLRTSSSTSDGTENLI 89
Query: 598 STLPSGQLSNVPWRRSGVKYANNEAYFDV 684
S+L S + + N E Y V
Sbjct: 90 SSLSSWDWVTIDGLKLPAVTRNKERYVAV 118
>Z81073-7|CAB03032.2| 248|Caenorhabditis elegans Hypothetical
protein F30F8.5a protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.65
Identities = 29/89 (32%), Positives = 41/89 (46%)
Frame = +1
Query: 418 SDCTETIIKENYVVVYELLDEMLDNGFPLATESNILKELIKPPNILRTIANTVTGKSNVS 597
SDC+ T K+N V E +M ++ T+SN K L PP LRT ++T G N+
Sbjct: 35 SDCS-TPEKQNGAVGNE--QQMNNSTSTRRTDSN--KNLSPPPQRLRTSSSTSDGTENLI 89
Query: 598 STLPSGQLSNVPWRRSGVKYANNEAYFDV 684
S+L S + + N E Y V
Sbjct: 90 SSLSSWDWVTIDGLKLPAVTRNKERYVAV 118
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 286 QPTPVVH-H*VMLSVLPNNNHILNEGSHFSNASLETRRPM 170
Q PV H H ++ LP+ +HI+ + F N S+ RRPM
Sbjct: 1930 QTNPVFHVHRTGITALPHGSHIVEKTFLFENMSMIFRRPM 1969
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 286 QPTPVVH-H*VMLSVLPNNNHILNEGSHFSNASLETRRPM 170
Q PV H H ++ LP+ +HI+ + F N S+ RRPM
Sbjct: 1930 QTNPVFHVHRTGITALPHGSHIVEKTFLFENMSMIFRRPM 1969
>AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, small
chain (clathrinassociated complex) protein 1 protein.
Length = 157
Score = 31.5 bits (68), Expect = 0.85
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 364 LFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEML 486
L +E +HR V+ YF E I N+ Y +LDE L
Sbjct: 78 LITLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFL 118
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 817 FDDVSFHPCVRXKRWEAERILSFIPPDG 900
F+ + FH V ++ E++++F PPDG
Sbjct: 1324 FEALEFHSIVNKPEFDKEQVIAFSPPDG 1351
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 499 WQNTIPESVIDYYLDDEKRSESQLILPPETA 529
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 504 WQNTIPESVIDYYLDDEKRSESQLILPPETA 534
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 515 WQNTIPESVIDYYLDDEKRSESQLILPPETA 545
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 504 WQNTIPESVIDYYLDDEKRSESQLILPPETA 534
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 499 WQNTIPESVIDYYLDDEKRSESQLILPPETA 529
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 515 WQNTIPESVIDYYLDDEKRSESQLILPPETA 545
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 499 WQNTIPESVIDYYLDDEKRSESQLILPPETA 529
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 504 WQNTIPESVIDYYLDDEKRSESQLILPPETA 534
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 515 WQNTIPESVIDYYLDDEKRSESQLILPPETA 545
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 504 WQNTIPESVIDYYLDDEKRSESQLILPPETA 534
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 499 WQNTIPESVIDYYLDDEKRSESQLILPPETA 529
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 199 WRSVIPRSVCDYYLEAQRASPND--VPPVLA 285
W++ IP SV DYYL+ ++ S + +PP A
Sbjct: 515 WQNTIPESVIDYYLDDEKRSESQLILPPETA 545
>U61235-1|AAB17540.1| 485|Caenorhabditis elegans ZK protein.
Length = 485
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 661 NNEAYFDVVEEVDAIIDKSGATVNAEIQ-GYIDCCIKLSGMPDL-TLTFVNP 810
+NE FD+ ++ I+DK G T + +Q +I+ +LS D+ + ++V+P
Sbjct: 202 SNEVSFDIQRDIGRILDKVGETAASGVQTNHIEADQRLSPSTDVQSDSYVSP 253
>U21308-4|AAB93321.1| 484|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 1 protein.
Length = 484
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 661 NNEAYFDVVEEVDAIIDKSGATVNAEIQ-GYIDCCIKLSGMPDL-TLTFVNP 810
+NE FD+ ++ I+DK G T + +Q +I+ +LS D+ + ++V+P
Sbjct: 201 SNEVSFDIQRDIGRILDKVGETAASGVQTNHIEADQRLSPSTDVQSDSYVSP 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,542,209
Number of Sequences: 27780
Number of extensions: 431172
Number of successful extensions: 1166
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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