Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_B13
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 113 2e-25
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 107 1e-23
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 89 3e-18
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 88 1e-17
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 62 7e-10
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 38 0.013
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z82259-6|CAB97264.1| 339|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z92812-9|CAM84813.1| 338|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z70034-7|CAA93856.1| 855|Caenorhabditis elegans Hypothetical pr... 29 4.7
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 29 4.7
U80028-7|AAG23984.1| 370|Caenorhabditis elegans Serpentine rece... 29 6.2
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 29 6.2
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 28 8.2
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 28 8.2
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 113 bits (271), Expect = 2e-25
Identities = 61/222 (27%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Frame = +1
Query: 265 FQNR-KLEHPNSDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVY 441
FQ+R E+ + ++F +++K+ LG+G+L++P AFK++G +G+ T+++ IC +C+
Sbjct: 39 FQDRLPTENSLTPEQAFIHMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMR 98
Query: 442 LLVKTSQDVSRVAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAV 621
+V + V + YA + GP +++ + ++ M + LG C V
Sbjct: 99 QVVFAAHFVCNRNGRDLIDYANIMRGAVEMGPPWIKRNGYFFKQLVNVNMFISQLGFCCV 158
Query: 622 YVILLVESVQQIVDYFYADNGI--NETMYCLMFLVPILIFTQIKNLKYLAPFSGFANILL 795
Y + + ++++ D+F + I ++ ++ L+ L+P+L I+ L LAPF+ AN++
Sbjct: 159 YFVFMADNLE---DFFNNNTSIHLSKAVWMLLLLIPMLSICSIRRLSILAPFAMAANVVY 215
Query: 796 VLTFLICLYYICNEFPDLDSXPTSVNIGNLPLFXGTVIFAME 921
V+ + L++ ++ + S P +LPLF GTV+FA E
Sbjct: 216 VVAVAVVLFFFLSDLRPISSLPWFGKATDLPLFFGTVMFAFE 257
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 107 bits (256), Expect = 1e-23
Identities = 55/206 (26%), Positives = 108/206 (52%)
Frame = +1
Query: 304 RSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAK 483
++ +++K +G+G+L++P AFK++G +G+ + IC +C L+ ++ + +
Sbjct: 43 QALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTRQLIFGQHYITFIKR 102
Query: 484 VPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVD 663
+ YA + + GP +R + ++ M G C VY + + ++++Q D
Sbjct: 103 EQRMDYANVMRSAVELGPAWIRGHGYLFKQMVNINMFVAQFGFCCVYFVFMADNLKQFFD 162
Query: 664 YFYADNGINETMYCLMFLVPILIFTQIKNLKYLAPFSGFANILLVLTFLICLYYICNEFP 843
+ + I++ + + L+PI I+ LK LAP + AN + ++ +I L + +++
Sbjct: 163 QTSSIH-ISQAGWIALLLIPISALCTIRELKALAPLAAVANFVYIIAVVIVLADLFSDWQ 221
Query: 844 DLDSXPTSVNIGNLPLFXGTVIFAME 921
LDS P + NLPLF GTV+FA E
Sbjct: 222 PLDSLPAFGAVENLPLFFGTVMFAFE 247
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 89.4 bits (212), Expect = 3e-18
Identities = 53/218 (24%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Frame = +1
Query: 280 LEHPNSDVRS-FA--NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLV 450
LEH + S FA NL+K LG+G ++P AFK +G + G+ ++LG++C C+ LV
Sbjct: 14 LEHYKKAISSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLV 73
Query: 451 KTSQDVSRVAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVI 630
K + +S+V + L Y +RK + SR ++ ++ LG C + I
Sbjct: 74 KCAGYLSKVNQSAPLDYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFYI 133
Query: 631 LLVESVQQIVDYFYADNGINETMYCLMFLVPILIFTQIKNLKYLAPFSGFANILLVLTFL 810
+V + +++++ D T++ M L ++ + +++ L+ S N L+++
Sbjct: 134 FVVYHLHELLEFVMNDVPSRATLF-PMVLPAFILLVSLSSMRALSLVSLGGNFLMLIALA 192
Query: 811 ICLY-YICNEFPDLDSXPTSVNIGNLPLFXGTVIFAME 921
+ ++ + E L P ++ + GT+++A+E
Sbjct: 193 VIMFQLLTTEHKKLADLPPVTDLMGIVSAAGTILYALE 230
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 87.8 bits (208), Expect = 1e-17
Identities = 47/203 (23%), Positives = 100/203 (49%), Gaps = 1/203 (0%)
Frame = +1
Query: 316 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 495
NL+K LG+G ++P AFK +G + G+ ++LG++C C+ LVK + +S+V + L
Sbjct: 84 NLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPL 143
Query: 496 GYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYA 675
Y +RK + SR ++ ++ LG C + I +V + +++++
Sbjct: 144 DYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFYIFVVYHLHELLEFVMN 203
Query: 676 DNGINETMYCLMFLVPILIFTQIKNLKYLAPFSGFANILLVLTFLICLY-YICNEFPDLD 852
D T++ M L ++ + +++ L+ S N L+++ + ++ + E L
Sbjct: 204 DVPSRATLF-PMVLPAFILLVSLSSMRALSLVSLGGNFLMLIALAVIMFQLLTTEHKKLA 262
Query: 853 SXPTSVNIGNLPLFXGTVIFAME 921
P ++ + GT+++A+E
Sbjct: 263 DLPPVTDLMGIVSAAGTILYALE 285
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 69.3 bits (162), Expect = 4e-12
Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Frame = +1
Query: 316 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 495
N + +G G ++ +FK AG G+ I+G++ + ++ +V SQ +++ SL
Sbjct: 71 NFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQYLAKSNGDQSL 130
Query: 496 GYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYA 675
Y E EA + RK + ++I I+ + LG V+++ VE V +I ++F A
Sbjct: 131 DYGEMAEAAMQNSYKWARKHGKLAKIVINACLLAFQLGVITVFMVFAVEHVIEIWEFF-A 189
Query: 676 DNG--INETMYCLMFLVPILIFTQIKNLKYLAPFSGFANILLVLTFLI 813
D+ ++ + LM+ VP ++ I ++K L F N+++ ++
Sbjct: 190 DSPPPFSKCVMILMYFVPQMLLNFIGHMKLLTILCLFGNVIIFAAIVL 237
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 61.7 bits (143), Expect = 7e-10
Identities = 48/238 (20%), Positives = 102/238 (42%), Gaps = 10/238 (4%)
Frame = +1
Query: 238 DVELNTYDPFQNRKLEHPNSDVRS--------FANLLKSSLGSGILAMPAAFKNAGTIVG 393
D E+ YD + RK + VR N + +G G ++ +FK AG G
Sbjct: 9 DTEIQNYDSIEFRKNAGGSIVVRKTGISATSGLINFVCGMMGPGCFSLAVSFKQAGLWGG 68
Query: 394 IFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEAVFATGPQTLRKFSRASRI 573
I+G + + ++ +V SQ +S L Y E ++ +K+ + +++
Sbjct: 69 FASVFIIGGLSLYSMHKIVNCSQFLSEKKGDQKLDYGEMAKSAMENSYGWAKKYGKIAKV 128
Query: 574 FIDWAMAFTILGACAVYVILLVESVQQIVDYFY-ADNGINETMYCLMFLVPILIFTQIKN 750
++ + LG V +I VE + +I + + ++ + LM+ VP ++F I +
Sbjct: 129 VVNTCLLAFQLGVITVSMIFAVEHIIEIWQFIAGSPPPFSKIVLILMYFVPQMLFNLIGH 188
Query: 751 LKYLAPFSGFANILLVLTF-LICLYYICNEFPDLDSXPTSVNIGNLPLFXGTVIFAME 921
++ + S N+++ LI + + + P+ + + L G++I++ E
Sbjct: 189 IRIITFLSLCGNVIIFAAIALITQELLSHTWYPTWELPSITGVEGVSLAAGSLIYSFE 246
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 37.5 bits (83), Expect = 0.013
Identities = 39/205 (19%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Frame = +1
Query: 319 LLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLG 498
++ + G G++A+P A + G + G F ++ +CT+ LL + + + P
Sbjct: 20 IVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYTGILLAENWTILQEL--YPE-- 75
Query: 499 YAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYAD 678
Y + + LR F+ + T G V+V+L ++ + ++ +A+
Sbjct: 76 YRDHCRKPYPA--MGLRAIGPKFAHFVSAMLQVTQFGTAVVFVLLAAKNGENML---HAN 130
Query: 679 NGINETMYCLMFLVPILI--FTQIKNLK------YLAPFSGFANILLVLTFLICLYYICN 834
G + + ++ +V +L+ FT K+ K A S +++L++ + Y +C+
Sbjct: 131 FGTHVSFCYMILIVGLLVFPFTLPKSPKDFWYAVVAAMISTTISVVLIIFGTVQDYEVCH 190
Query: 835 E---FPDLDSXPTSVNIGNLPLFXG 900
+ +P + T ++ G + G
Sbjct: 191 KEVFYPSFNFSKTLMSFGTIMFSYG 215
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 319 LLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVK 453
++ +G G++AMP AFK +G +GI + + + YLL K
Sbjct: 53 IIADMVGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGK 97
>Z82259-6|CAB97264.1| 339|Caenorhabditis elegans Hypothetical
protein C28D4.7 protein.
Length = 339
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/80 (32%), Positives = 36/80 (45%)
Frame = +1
Query: 244 ELNTYDPFQNRKLEHPNSDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYI 423
+LN F E PN + NLL+ G G A+ N G ++G FG +I+ Y
Sbjct: 192 DLNLDGIFLKNATEAPNMYIVKLLNLLRDPEGFG----KVAYDNNGKVIG-FGNVII-YP 245
Query: 424 CTHCVYLLVKTSQDVSRVAK 483
CV L D S+VA+
Sbjct: 246 SGECV--LTPLYADDSKVAQ 263
>Z92812-9|CAM84813.1| 338|Caenorhabditis elegans Hypothetical
protein T03E6.9 protein.
Length = 338
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 619 VYVILLVESVQQIVDYFYADNGINETMYCLMFLVPILIFTQIKNLKYLAP 768
VY+I ++ V I FYAD I+ T Y L +L+ I I N+ ++ P
Sbjct: 259 VYIIFIIVPVAVISTLFYAD--IHITDYGLPYLLMICSQGTINNMIHIVP 306
>Z70034-7|CAA93856.1| 855|Caenorhabditis elegans Hypothetical
protein C18E9.7 protein.
Length = 855
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 160 TAVITGNGIYPSTISINTINPKNKDNDVELNTYD 261
TA I + +YP IS N+IN D+D E +D
Sbjct: 478 TAPIISSTVYPGQISSNSININFGDSDPEQGRFD 511
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 349 LAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGY 501
L P + + IF +I CTH + L+ +SQ S ++ + GY
Sbjct: 298 LLAPGVYNILNQLASIFSMLITLNSCTHLIICLIMSSQYRSTTIQIFTCGY 348
>U80028-7|AAG23984.1| 370|Caenorhabditis elegans Serpentine
receptor, class w protein124 protein.
Length = 370
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 331 SLGSGILAMPA-AFKNAGTIVGIFGTIILGY-ICTHCVYLLVKTSQDVSRVAKVPSLGYA 504
S+GS L M + +N G T+++ CTH + L+ +SQ S V S GY
Sbjct: 290 SVGSAWLFMSSPGVQNILNFFGYMFTVLISVNACTHLIVCLIVSSQYRSTAISVLSCGYI 349
Query: 505 ETV 513
V
Sbjct: 350 SQV 352
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +3
Query: 657 RRLFLRRQWHQRNNVLPYVPSTHSYFHSNKKSKVLSSVFGIRQYSSGPHFLDLPVLHLQR 836
RRL + +W +N+ VP T + + K SS + + + PH P L QR
Sbjct: 1067 RRLRIYNEWKSKNSANRDVPPTRAPLTVYNQQKPSSSSMMVSRVQAAPHL--NPALTQQR 1124
Query: 837 ISRS*FXTNFSK 872
+ F T+ K
Sbjct: 1125 YFKVSFATDNKK 1136
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 569 GYLSTGQWLLLFLALVLYMSFYLWSQFSRSSIISTQTMASTKQCTALCS*YPFLF 733
G +T Q LL++L ++L + YL+ RSSI+ T+Q T + Y FLF
Sbjct: 105 GVPNTFQILLVWLMVLLTVGSYLYFFEGRSSILVQNKFRITRQKTRVI--YYFLF 157
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 574 FIDWAMAFTILGACAVYVILLVESVQQIVDYFYADNGINETMYCLMFLVPIL-IFTQIKN 750
FI W + +L +V +I ++ V +I DY T Y L+ V IL +F+ I
Sbjct: 116 FISWGLISLVLNFISVLIISIISKVAKIFDY---------TDYTLLLFVLILFLFSSIAM 166
Query: 751 LKYLAPFSGFANILLVLTFLI 813
+ + ANI T ++
Sbjct: 167 SIFFSTLFTNANIATAATCVL 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,984,912
Number of Sequences: 27780
Number of extensions: 421288
Number of successful extensions: 1302
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -