Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_B10
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090...    29   3.1  
02_05_0382 + 28491318-28491374,28492031-28492114,28492249-284922...    29   3.1  
04_03_0027 + 9667508-9668800                                           29   4.1  
03_05_0938 - 28978696-28978809,28978942-28979028,28979124-289792...    29   5.4  

>09_06_0107 +
           20907560-20908491,20908511-20908625,20908967-20909058,
           20909293-20909556,20910714-20911494
          Length = 727

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +1

Query: 172 TYSTIINAVLIWQPPPETDKNKKRISFQDLEKEVHLLTRMFENIEVWTGTYKY 330
           T  T+I+AV++ Q   +  K +   +F++LEK+   L  +      ++G   Y
Sbjct: 588 TLLTVIHAVVVQQAEEQKQKKRSESAFKELEKKAEELRSLESKYGPYSGAEGY 640


>02_05_0382 +
           28491318-28491374,28492031-28492114,28492249-28492272,
           28492398-28492472,28493083-28493157,28493198-28493290,
           28493332-28493409,28493690-28493767,28494084-28494147,
           28494474-28494655,28494729-28495064,28495148-28495267,
           28495434-28495923,28496240-28496502
          Length = 672

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 406 IAYVYVNHPNESDADIWCDGTSAEECNELLNFKL 507
           I   Y+N  N+ + DIW DG + ++ + LL+ KL
Sbjct: 126 IQLFYINCDNQDEIDIW-DGKTKQDSSSLLDSKL 158


>04_03_0027 + 9667508-9668800
          Length = 430

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +1

Query: 175 YSTIINAVLIWQPPPETDKNKKRISFQDLEK 267
           Y+ I+N ++ W  PP   +NKKR+S++  ++
Sbjct: 135 YAPIVNFMVAWHVPP--GENKKRLSYESRKR 163


>03_05_0938 -
           28978696-28978809,28978942-28979028,28979124-28979256,
           28979592-28979865,28980242-28980368,28980523-28980773,
           28980854-28980935
          Length = 355

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 378 DHLPQILGYCLSINLNILV 322
           DH  Q+LGYCL +N  I++
Sbjct: 121 DHFTQLLGYCLELNNRIVL 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,025,048
Number of Sequences: 37544
Number of extensions: 351525
Number of successful extensions: 837
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)