Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_B10
         (768 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC058906-1|AAH58906.1|  523|Homo sapiens aarF domain containing ...    31   4.5  
BC028296-1|AAH28296.1|  388|Homo sapiens LPHN1 protein protein.        30   7.9  
AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane hel...    30   7.9  
AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.     30   7.9  

>BC058906-1|AAH58906.1|  523|Homo sapiens aarF domain containing
           kinase 1 protein.
          Length = 523

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
 Frame = +1

Query: 94  CEGCYA-MGKLVNPTDVVGS--GLIQESYTYSTIINAVLIWQPPPETDKNKKRISFQDLE 264
           CE C A  G  +     +G+   L+ E YT ST+   VL  Q P  + +  +++  +DL 
Sbjct: 83  CELCCANRGTFIKVGQHLGALDYLLPEEYT-STL--KVLHSQAPQSSMQEIRQVIREDLG 139

Query: 265 KEVHLLTRMFENIEVWTGT----YKYIEIDGQTV 354
           KE+H L + F++  + T +    +K +  DG+TV
Sbjct: 140 KEIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTV 173


>BC028296-1|AAH28296.1|  388|Homo sapiens LPHN1 protein protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 316 GTYKYIEIDGQTVPKYLWKVVGIPENDDMKIAYVYVNHPNESDADIWC 459
           GTYKY+E+    VP  + + V +      K+      H +E  +  WC
Sbjct: 117 GTYKYLEVQYDCVPYKVEQKVFVCPGTLQKVLEPTSTHESEHQSGAWC 164


>AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 1474

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 316 GTYKYIEIDGQTVPKYLWKVVGIPENDDMKIAYVYVNHPNESDADIWC 459
           GTYKY+E+    VP  + + V +      K+      H +E  +  WC
Sbjct: 117 GTYKYLEVQYDCVPYKVEQKVFVCPGTLQKVLEPTSTHESEHQSGAWC 164


>AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.
          Length = 1566

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 316 GTYKYIEIDGQTVPKYLWKVVGIPENDDMKIAYVYVNHPNESDADIWC 459
           GTYKY+E+    VP  + + V +      K+      H +E  +  WC
Sbjct: 209 GTYKYLEVQYDCVPYKVEQKVFVCPGTLQKVLEPTSTHESEHQSGAWC 256


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,481,068
Number of Sequences: 237096
Number of extensions: 1996989
Number of successful extensions: 3828
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3828
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)