Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_B10
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical pr... 29 3.6
U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical pr... 29 3.6
U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical pr... 29 3.6
U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal enha... 29 4.8
U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal enha... 29 4.8
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 29 4.8
AJ561208-1|CAD99210.1| 278|Caenorhabditis elegans NAS-15 protei... 29 4.8
AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal en... 29 4.8
Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical pr... 28 8.4
U28944-2|AAL08028.1| 339|Caenorhabditis elegans Hypothetical pr... 28 8.4
U28944-1|AAA68368.1| 342|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 28 8.4
>U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical
protein F47B7.2a protein.
Length = 623
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 283 TRMFENIEVWTGTYKYIEIDGQTVPKYL-W-KVVGIPENDDMKIAYVYVNHP 432
T E + GT Y+ I Q P + W ++ N+ +K+AYV NHP
Sbjct: 184 TTTLEEVFKSIGTTSYLAIVVQDSPSVIAWANLINYHGNNGVKVAYVTQNHP 235
>U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical
protein F47B7.2c protein.
Length = 624
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 283 TRMFENIEVWTGTYKYIEIDGQTVPKYL-W-KVVGIPENDDMKIAYVYVNHP 432
T E + GT Y+ I Q P + W ++ N+ +K+AYV NHP
Sbjct: 184 TTTLEEVFKSIGTTSYLAIVVQDSPSVIAWANLINYHGNNGVKVAYVTQNHP 235
>U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical
protein F47B7.2b protein.
Length = 678
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 283 TRMFENIEVWTGTYKYIEIDGQTVPKYL-W-KVVGIPENDDMKIAYVYVNHP 432
T E + GT Y+ I Q P + W ++ N+ +K+AYV NHP
Sbjct: 184 TTTLEEVFKSIGTTSYLAIVVQDSPSVIAWANLINYHGNNGVKVAYVTQNHP 235
>U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform b protein.
Length = 169
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 145 GSGLIQESYTYSTIINAVLIWQPPPETDKNKKRISFQDLEKEVHLLTRMFENIE 306
GS I S T ++ I+ + + P DK KK+ISF ++ + F+ +
Sbjct: 8 GSSDISSSSTDTSAISPISVSSMPLSPDKEKKKISFVRYNPDIPQIVTSFKGYQ 61
>U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform a protein.
Length = 427
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 145 GSGLIQESYTYSTIINAVLIWQPPPETDKNKKRISFQDLEKEVHLLTRMFENIE 306
GS I S T ++ I+ + + P DK KK+ISF ++ + F+ +
Sbjct: 8 GSSDISSSSTDTSAISPISVSSMPLSPDKEKKKISFVRYNPDIPQIVTSFKGYQ 61
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 85 IDPCEGCYAM-GKLVNPTDV-VGSGLIQESYTYSTIINAVLIWQPPPETDKN 234
I P GCY+M GK+ + +GSG IQ+ +++AV + TD++
Sbjct: 172 IYPDRGCYSMVGKMGGKQSLSLGSGCIQKGIILHELMHAVGFFHEQSRTDRD 223
>AJ561208-1|CAD99210.1| 278|Caenorhabditis elegans NAS-15 protein
protein.
Length = 278
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 85 IDPCEGCYAM-GKLVNPTDV-VGSGLIQESYTYSTIINAVLIWQPPPETDKN 234
I P GCY+M GK+ + +GSG IQ+ +++AV + TD++
Sbjct: 66 IYPDRGCYSMVGKMGGKQSLSLGSGCIQKGIILHELMHAVGFFHEQSRTDRD 117
>AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal
enhancer binding protein-1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 145 GSGLIQESYTYSTIINAVLIWQPPPETDKNKKRISFQDLEKEVHLLTRMFENIE 306
GS I S T ++ I+ + + P DK KK+ISF ++ + F+ +
Sbjct: 6 GSSDISSSSTDTSAISPISVSSMPLSPDKEKKKISFVRYNPDIPQIVTSFKGYQ 59
>Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical
protein K04G2.10 protein.
Length = 319
Score = 27.9 bits (59), Expect = 8.4
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Frame = +1
Query: 220 ETDKNKKRISFQDLEKEVHLLTRMFENIEVWTGTYKYIEIDGQT-----VPKYLWKVVGI 384
E +KN R+ QDLE++V + R EN ++ T + +E +G T + + V +
Sbjct: 135 EVEKNTMRLQIQDLERQVQM--RRCENRKM--KTIQEVEKEGSTESQDSIHDHPMVKVLM 190
Query: 385 PENDDMKIAY-VYVNHPNESDADIWCDGTS---AEECNELLNFKLDK 513
ND + I V P E + W D +E+ +L ++ LD+
Sbjct: 191 EINDQLMIEMRKKVEAPEEYPLEEWKDAIEQKWSEKYEKLRDYALDQ 237
>U28944-2|AAL08028.1| 339|Caenorhabditis elegans Hypothetical
protein C18A3.4b protein.
Length = 339
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 468 GTVTPNVRVTLVRMIDVNISYFHVIVFRYADHLPQILG 355
G ++ VT V +D ISY +V+VFR D + G
Sbjct: 221 GIYGTHILVTTVSRMDELISYRYVVVFRLLDFFFMVFG 258
>U28944-1|AAA68368.1| 342|Caenorhabditis elegans Hypothetical
protein C18A3.4a protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 468 GTVTPNVRVTLVRMIDVNISYFHVIVFRYADHLPQILG 355
G ++ VT V +D ISY +V+VFR D + G
Sbjct: 221 GIYGTHILVTTVSRMDELISYRYVVVFRLLDFFFMVFG 258
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 313 TGTYKYIEIDGQTVPKYLWKVVGIPENDDMKIAYVYVNHPNESDADIWCDGT 468
TG Y IE + T+PK+L +++G+P + + + + E A DGT
Sbjct: 1178 TGQYT-IEKEAATIPKFLNRILGLPVHAQNSLFHYFSEIVAELIAQSKHDGT 1228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,245,614
Number of Sequences: 27780
Number of extensions: 338040
Number of successful extensions: 862
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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