Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_B10
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.1  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    22   7.2  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   7.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   7.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.2  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 205  WQPPPETDKN 234
            WQPPP T  N
Sbjct: 1132 WQPPPNTHSN 1141


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 205  WQPPPETDKN 234
            WQPPP T  N
Sbjct: 1128 WQPPPNTHSN 1137


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 249 FSRFREGSAPSY*NVRKY 302
           +SR RE    SY N RKY
Sbjct: 39  YSRSREREQKSYKNERKY 56


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 249 FSRFREGSAPSY*NVRKY 302
           +SR RE    SY N RKY
Sbjct: 39  YSRSREREQKSYKNERKY 56


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +1

Query: 475 EECNELLNFKLDKYAYCCDIQTFYKETRFSFE 570
           E+C   + +  D + Y   I  F+K++ F  +
Sbjct: 318 EDCGSAIAYVSDVFRYGLLIYDFFKDSSFRIQ 349


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +1

Query: 211 PPPETDK-NKKRISFQDLEKEV 273
           PPP+ D+ + K +S  + EKEV
Sbjct: 689 PPPQVDEVDDKELSGAEEEKEV 710


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 373 PSTNTWVLFVHQSQYTCR 320
           PS  TW L    S +TCR
Sbjct: 9   PSYCTWELNATNSPHTCR 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,620
Number of Sequences: 438
Number of extensions: 4048
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)