Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_B09
         (819 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    27   0.24 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   1.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.7  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 224 CVMLHSSSPPPFRHSAQP 171
           C  L SS PPP++ SAQP
Sbjct: 323 CWSLTSSPPPPYQISAQP 340


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 614 TELPPTHPIRLGLALNFSVFYYEILNSPDR 703
           T+  P HP+R+   ++FS   Y+ + + D+
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 614 TELPPTHPIRLGLALNFSVFYYEILNSPDR 703
           T+  P HP+R+   ++FS   Y+ + + D+
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 13  DELVESRIWIRLAGAA 60
           D  VESR+W R A AA
Sbjct: 530 DSSVESRVWPRAAAAA 545


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 457 HPQLTDRRIKSFLLQNEGRLPPVPG 531
           HP  T R + SF   N  + PP  G
Sbjct: 334 HPYGTTRLMSSFAFDNNDQGPPQDG 358


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 55  RPPTESKFEIQLTHRPAE 2
           RPP +  F  Q  H PAE
Sbjct: 433 RPPGDPAFHNQYAHYPAE 450


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
 Frame = -3

Query: 91  PKRQXTDAPRWPRPPT----ESKFEIQLTHRPAE 2
           P    T  P W RPP+    +    +Q T +P +
Sbjct: 402 PTISTTPRPEWARPPSTPSADGSKPVQTTPKPGQ 435


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 457 HPQLTDRRIKSFLLQNEGRLPP 522
           HP  T R + SF   N  + PP
Sbjct: 333 HPYGTTRLMSSFAFDNNDQGPP 354


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 457 HPQLTDRRIKSFLLQNEGRLPP 522
           HP  T R + SF   N  + PP
Sbjct: 334 HPYGTTRLMSSFAFDNNDQGPP 355


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +1

Query: 388 PQPG*EGAP*HLL*HPRCPRQVPHPQLTD 474
           P PG    P HL  HP      P  +L D
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGPKQELPD 260


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +1

Query: 388 PQPG*EGAP*HLL*HPRCPRQVPHPQLTD 474
           P PG    P HL  HP      P  +L D
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGPKQELPD 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,704
Number of Sequences: 336
Number of extensions: 2964
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)