Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_B09
(819 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
EF519383-1|ABP68492.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
EF519381-1|ABP68490.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
EF519380-1|ABP68489.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
EF519374-1|ABP68483.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
EF519371-1|ABP68480.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
EF519366-1|ABP68475.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
EF519359-1|ABP68468.1| 506|Anopheles gambiae LRIM1 protein. 27 0.92
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 27 0.92
EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519363-1|ABP68472.1| 503|Anopheles gambiae LRIM1 protein. 24 6.5
AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein. 23 8.6
>EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519383-1|ABP68492.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519381-1|ABP68490.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519380-1|ABP68489.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519374-1|ABP68483.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519371-1|ABP68480.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQQKETQLAEENARLKKLNGEADLAVASANATLQELLVREQNLAS 506
>EF519366-1|ABP68475.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519359-1|ABP68468.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 0.92
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 26.6 bits (56), Expect = 0.92
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 158 KLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWR 316
KL+ E+ + ++ + K RN+ N VE R+ S+ Y V+ SWR
Sbjct: 702 KLSLAPEKTELLMISSKRSGYRNIPVNICGVEVRSKRSIRYLGVMLHDHLSWR 754
Score = 24.6 bits (51), Expect = 3.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 214 SITQRVRQ*ADSGGEEPAVGRLQERDRR 297
S Q ++Q D+G ++GR RDRR
Sbjct: 544 STLQAIQQVVDAGRRALSLGRTNNRDRR 571
>EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 26.2 bits (55), Expect = 1.2
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 271
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELLVREQNLAS 506
>EF519363-1|ABP68472.1| 503|Anopheles gambiae LRIM1 protein.
Length = 503
Score = 23.8 bits (49), Expect = 6.5
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +2
Query: 134 REXNVYKAK---LAEQAERYDEMV-EAMKNVASRNVSDNELTVEERN 262
R+ ++Y+ K LAE+ R ++ EA VAS N + EL V E+N
Sbjct: 457 RDWDMYQHKETQLAEENARLKKLNGEADLAVASANATLQELVVREQN 503
>AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein.
Length = 93
Score = 23.4 bits (48), Expect = 8.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 76 TDAPRWPRPPT 44
T RWPRPPT
Sbjct: 21 TRGRRWPRPPT 31
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,358
Number of Sequences: 2352
Number of extensions: 13382
Number of successful extensions: 59
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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