Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_B06
         (358 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC; ...    71   8e-12
UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c oxi...    62   3e-09
UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;...    53   2e-06
UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p...    52   2e-06
UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C, mitoch...    42   0.004
UniRef50_Q383R4 Cluster: Putative uncharacterized protein; n=3; ...    33   1.1  
UniRef50_A6EE33 Cluster: Putative uncharacterized protein; n=1; ...    32   3.4  
UniRef50_A2DPJ5 Cluster: Putative uncharacterized protein; n=1; ...    32   3.4  
UniRef50_Q8BI67 Cluster: Zinc finger protein 473 homolog; n=6; M...    31   4.4  
UniRef50_Q8RAD6 Cluster: Mutants block sporulation after engulfm...    31   7.7  
UniRef50_P91863 Cluster: Putative uncharacterized protein aex-5;...    31   7.7  

>UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC;
           n=4; Endopterygota|Rep: Cytochrome c oxidase polypeptide
           VIIC - Aedes aegypti (Yellowfever mosquito)
          Length = 67

 Score = 70.5 bits (165), Expect = 8e-12
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +1

Query: 82  LGRNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
           + R  +TN VR +HS+GGIPGENLPF + NRYKLT  FI++ GSGL AP+ +
Sbjct: 8   ISRTGMTNLVRYSHSHGGIPGENLPFSLTNRYKLTALFIVFLGSGLGAPFFV 59


>UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc; n=1; Graphocephala
           atropunctata|Rep: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc - Graphocephala atropunctata
          Length = 65

 Score = 62.1 bits (144), Expect = 3e-09
 Identities = 25/49 (51%), Positives = 35/49 (71%)
 Frame = +1

Query: 88  RNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
           RN+ T+  R    GGIPG NLPF + N++KLT  F++Y GSG+S P+L+
Sbjct: 10  RNLSTSLARRSQPGGIPGVNLPFSLDNKFKLTALFVVYFGSGMSVPFLM 58


>UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 71

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = +1

Query: 115 NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
           +H   G PG NLP +I NRY LT  FIL+ GSGLS P+L+
Sbjct: 25  DHGPEGYPGANLPINIQNRYVLTATFILFFGSGLSLPFLV 64


>UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p -
           Drosophila melanogaster (Fruit fly)
          Length = 66

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 22/54 (40%), Positives = 34/54 (62%)
 Frame = +1

Query: 73  SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
           S+ + RN   + VR   +GG+PGENLPF + N+Y++T  F +    G  +P+LI
Sbjct: 5   SSVIARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLI 58


>UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C,
           mitochondrial precursor; n=46; Deuterostomia|Rep:
           Cytochrome c oxidase subunit 7C, mitochondrial precursor
           - Homo sapiens (Human)
          Length = 63

 Score = 41.5 bits (93), Expect = 0.004
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +1

Query: 88  RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLI 234
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P+L+
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLV 55


>UniRef50_Q383R4 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma|Rep: Putative uncharacterized protein -
           Trypanosoma brucei
          Length = 1211

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +1

Query: 1   RPADGDTYSSNRRNVKMITPLTRISNKLGRNVVTNFVRNHSNGGIPGENLPF 156
           RP +GD   S   +  ++ PL   S+  G        R HSNG +PG N PF
Sbjct: 175 RPGEGDIDLSVLPSRSLLGPLMAHSDTKGIPYFKVDNRGHSNGRVPGVNAPF 226


>UniRef50_A6EE33 Cluster: Putative uncharacterized protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative uncharacterized
           protein - Pedobacter sp. BAL39
          Length = 204

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 73  SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGL 216
           +NKL  ++  NF+ N    G   EN+   IH  Y L L F++Y+ + L
Sbjct: 101 ANKLASHIFNNFISNWEEDGY--ENIVHGIHYMY-LNLRFVMYSAAQL 145


>UniRef50_A2DPJ5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 393

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 16  DTYSSNRRNVKMITPLTRIS--NKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTL 186
           +TYS++  NV MI P   ++   K G+N++   V +   G +P + L      RY + L
Sbjct: 289 ETYSADEYNVFMINPGDYVTCIGKKGKNMIVEIVGSGLRGEVPSDKLVKTDFKRYLVKL 347


>UniRef50_Q8BI67 Cluster: Zinc finger protein 473 homolog; n=6;
           Murinae|Rep: Zinc finger protein 473 homolog - Mus
           musculus (Mouse)
          Length = 892

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -1

Query: 211 QSPHIG*NTMSACNGCECRRVDSRQEYRR*NGFSRNSLPHFCPICLR 71
           Q PH      S C    CRR D  +  R  +GF     PH CP+C R
Sbjct: 485 QKPH----KCSECGKAFCRRTDLTEHQRVHSGFR----PHQCPVCAR 523


>UniRef50_Q8RAD6 Cluster: Mutants block sporulation after
           engulfment; n=3; Thermoanaerobacter|Rep: Mutants block
           sporulation after engulfment - Thermoanaerobacter
           tengcongensis
          Length = 384

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 42  RKDDYPIDSHLKQIGQKCGNEFREKPF*RRYSWRESTLRHSQPLQADIVFHPI 200
           ++D Y ID  +K++ QK GNEF   P     ++    L   QP +   +F  I
Sbjct: 32  KEDTYQIDRFVKELNQKTGNEF---PLIDVKTYLLEVLEGKQPFEVKKIFEGI 81


>UniRef50_P91863 Cluster: Putative uncharacterized protein aex-5;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein aex-5 - Caenorhabditis elegans
          Length = 537

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 85  GRNVVTN-FVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPY 228
           GRN   N FV    NGG+ G+N  +D +   + TL F +   SG  A Y
Sbjct: 264 GRNGKGNIFVWASGNGGVNGDNCAYDGYVSNEYTLSFGVIDASGAPAAY 312


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,470,783
Number of Sequences: 1657284
Number of extensions: 4714772
Number of successful extensions: 11813
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11812
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)